FC923724

Overview
NameFC923724
Unique NameFC923724
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923724 vs. ExPASy Swiss-Prot
Match: NUD14_ARATH (Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana GN=NUDT14 PE=1 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 1.019e-86
Identity = 168/240 (70.00%), Postives = 193/240 (80.42%), Query Frame = 2 
Query:   23 FYTLPKRLTVSPS---PPLLHFNYRSSRTRLVCSKMPTESSPSPLTHSITIPSQLSQPVHVVAAPGLSESDFRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVRVPTGRVILELPAGMLDDDNGDFVGTAVREVEEETGIQLKLEDMIDLTAFLYPSTGCKFFPSPGGCDERISLVL 733
            F  LP RL   PS   P  LH ++     R   S     SS S LT SIT+PSQ ++PV V A  G+S SDFR A++S+LF+ WL+NL+SE+GILA+G M LKQVLIQGVDMFGKRIGFLKFKADIF KETGQKVPGIVFARGPAVAVLILL+S+GETYA+LTEQVRVPTG+++LELPAGMLDDD GDFVGTAVREVEEE GI+LK EDM+DLTAFL PSTG + FPSPGGCDE +S+ L
Sbjct:    4 FTLLPSRLLAFPSRALPRRLHHHHAKLILRCKMS-----SSSSSLTQSITLPSQPNEPVLVSATAGISSSDFRDAIDSSLFRNWLRNLESESGILADGSMTLKQVLIQGVDMFGKRIGFLKFKADIFDKETGQKVPGIVFARGPAVAVLILLESDGETYAVLTEQVRVPTGKIVLELPAGMLDDDKGDFVGTAVREVEEEIGIKLKKEDMVDLTAFLDPSTGYRIFPSPGGCDEEMSVFL 238
The following BLAST results are available for this feature:
BLAST of FC923724 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NUD14_ARATH1.019e-8670.00Nudix hydrolase 14, chloroplastic OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC31708C06EF StrClemenN Citrus clementina cDNA clone C31708C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923724 ID=FC923724; Name=FC923724; organism=Citrus clementina; type=EST; length=734bp
GAAGCTTTCCATGTCTCAGCTCTTCTACACCCTCCCTAAACGACTAACCG
TTTCGCCTTCTCCCCCTCTTCTTCACTTTAATTACAGATCATCGAGAACG
AGACTAGTTTGTTCCAAAATGCCCACCGAGTCATCGCCATCGCCTTTGAC
TCATTCTATCACCATCCCGAGTCAACTCAGCCAACCCGTCCACGTTGTTG
CTGCCCCTGGTCTCTCCGAGTCCGATTTCAGGTGTGCTGTAGAATCAACT
TTGTTCAAGCAATGGTTGAAAAACCTGCAAAGCGAAACTGGGATTTTAGC
CAATGGTGATATGCTCTTGAAACAAGTTCTTATTCAGGGAGTGGATATGT
TTGGGAAGCGTATTGGTTTTCTAAAGTTTAAAGCAGACATTTTTTGTAAG
GAAACGGGACAAAAGGTTCCAGGTATTGTATTCGCACGAGGACCAGCTGT
AGCTGTCTTAATTCTTTTGGACTCGGAAGGTGAGACTTATGCTATTCTCA
CTGAACAGGTAAGGGTTCCCACTGGGAGAGTTATATTGGAATTACCTGCT
GGGATGCTGGATGATGACAATGGTGATTTTGTTGGCACAGCAGTCCGCGA
GGTTGAGGAAGAGACTGGTATTCAGTTGAAGCTGGAAGACATGATTGACC
TCACAGCCTTCTTGTACCCATCTACTGGATGCAAATTCTTCCCTTCTCCG
GGAGGGTGCGATGAAAGAATCAGCCTGGTTCTTT
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