FC923742

Overview
NameFC923742
Unique NameFC923742
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length624
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923742 vs. ExPASy Swiss-Prot
Match: HEBP2_HUMAN (Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.250e-13
Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 1
Query:  100 KAIESPQYAVVHEES----DFEVRLYSQSTWMSACVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQSDPPTPLPEIHLNPFEWDSHCVAVRKFSGFA 480
            +A+E+P +    +       +E+R Y  + W+S  V E + +  A   GF +L  YIQG N    +I MT+P+ + + PG+GP       ++LY+P + Q DPP PL E  +   +     V VR F GF+
Sbjct:   18 QAVETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSV-ESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGSGPFSESTITISLYIPSEQQFDPPRPL-ESDVFIEDRAEMTVFVRSFDGFS 146          
BLAST of FC923742 vs. ExPASy Swiss-Prot
Match: HEBP2_MOUSE (Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12
Identity = 49/170 (28.82%), Postives = 79/170 (46.47%), Query Frame = 1
Query:  100 KAIESPQYAVVHE----ESDFEVRLYSQSTWMSACVREELSFAKATLLGFHRLFQYIQGANLNNSRIAMTSPIVTSLVPGAGPLHSYAYVVTLYLPDKFQSDPPTPLPEIHLNPFEWDSHCVAVRKFSGFAIDEVIVKEADNLSFSLRRSPWANSTSSDSGRGYTLRFNL 597
            +A+E P +    +       +E+R Y  + W+S CV E L +  A   GF +L  YIQG N    +I +T+P+ + + PG+ P       ++LY+P + Q DPP P  E  +   +     V VR F GF+  +   ++   L+  LR      +       GY+  F L
Sbjct:   18 QALEMPSWKAPEDIDPQPGSYEIRHYGPAKWVSTCV-ESLDWDSAIQTGFTKLNGYIQGKNEKEMKIKLTAPVTSYVEPGSSPFSESTITISLYIPSEQQPDPPRP-SESDVFIEDRAEMTVFVRSFDGFSSGQKNQEQLLTLANILREEGKVFNEKVFYTAGYSSPFQL 185          
The following BLAST results are available for this feature:
BLAST of FC923742 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HEBP2_HUMAN7.250e-1332.82Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE... [more]
HEBP2_MOUSE1.615e-1228.82Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE... [more]
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Properties
Property NameValue
Genbank descriptionC31708D12EF StrClemenN Citrus clementina cDNA clone C31708D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923742 ID=FC923742; Name=FC923742; organism=Citrus clementina; type=EST; length=624bp
ATGATTTTTGAGAAATGAGATTTGAGAGAGGGGTCAACAATGGAGGGAGC
GAGTAAGTTAATGAAGCTGGCGACTCTTCTGTGTATGGTGGTACTATGTA
AGGCGATCGAGTCGCCGCAGTACGCGGTTGTACACGAAGAATCGGATTTC
GAAGTCAGACTTTATAGTCAGTCCACGTGGATGTCTGCCTGTGTTCGTGA
AGAACTCTCCTTTGCCAAAGCCACCTTACTCGGCTTCCACAGGTTGTTCC
AATACATTCAAGGTGCCAATCTAAACAACTCTCGGATTGCAATGACCTCT
CCTATTGTTACAAGCTTAGTTCCAGGAGCTGGTCCTCTTCACTCGTATGC
CTATGTTGTGACTTTGTACTTGCCTGACAAGTTCCAATCTGATCCTCCAA
CGCCCTTACCAGAAATTCATCTGAATCCCTTTGAATGGGACAGTCACTGT
GTTGCTGTCAGGAAGTTTTCTGGATTTGCAATTGATGAAGTCATCGTGAA
AGAGGCAGATAACCTTTCCTTCAGCTTGAGGAGGTCTCCTTGGGCTAACT
CTACTTCTTCAGATAGCGGCCGGGGGTACACTCTCCGCTTTAATTTATTT
ATATCATCCTCTTTGGTTAAATTT
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