FC923754
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923754 vs. ExPASy Swiss-Prot
Match: ENDUB_XENLA (Poly(U)-specific endoribonuclease-B OS=Xenopus laevis GN=endou-B PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.149e-44 Identity = 101/240 (42.08%), Postives = 139/240 (57.92%), Query Frame = 1 Query: 31 DLSQGCYRLWELDSNRLVPGKDYEIDCGDGKKAY------QKDDMAQGSLFSWLSDDVFR-KPTYSRFCSLLDNYNPNAGHKEVVTSEEKQEQAAFIEEISRTAPIKYLHKYLSAKGIVSGNYQDFKRTISSLWFDLYGRG-GTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFCLEEAKGNVDYQGYIFPRRRGQVPDSETQLLTVQFEWNGILKSVSTTLVGVSPEFEIALYTLCF 726 +LS+ LW+ D NR+ GKDY I GK Y Q D A LF ++ ++ + K T++ F SLLDNY + G EVVT EE E F++ I T +K H YL K + DFK + S+WF LY R G+ S FEHVFVGE K+ +E+ G HNW+QF L+E + N+DY+GY+ R+ PD + Q+L +QF W ++K V ++ +GVSPEFE ALYT+ F Sbjct: 11 ELSKLFNELWDADVNRMKAGKDYRISL-QGKAGYVPARSNQAKDSASYPLFQFVDEEKLKSKKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAKPSQNDFKVQLYSIWFQLYSRAPGSRPDSCGFEHVFVGESKRG--KEMMGLHNWVQFYLQEKRKNIDYKGYV-ARQNKSRPDEDDQVLNLQFSWKEMVKPVGSSFIGVSPEFEFALYTIVF 246
BLAST of FC923754 vs. ExPASy Swiss-Prot
Match: ENDUA_XENLA (Poly(U)-specific endoribonuclease-A OS=Xenopus laevis GN=endou-A PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.787e-44 Identity = 100/240 (41.67%), Postives = 138/240 (57.50%), Query Frame = 1 Query: 31 DLSQGCYRLWELDSNRLVPGKDYEIDCGDGKKAY------QKDDMAQGSLFSWLSDDVFR-KPTYSRFCSLLDNYNPNAGHKEVVTSEEKQEQAAFIEEISRTAPIKYLHKYLSAKGIVSGNYQDFKRTISSLWFDLYGRG-GTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFCLEEAKGNVDYQGYIFPRRRGQVPDSETQLLTVQFEWNGILKSVSTTLVGVSPEFEIALYTLCF 726 +LS+ LW+ D NR+ GKDY I GK Y Q D A LF ++ ++ + + T++ F SLLDNY + G EVVT EE E F++ I T +K H YL K DFK + ++WF LY R G+ S FEHVFVGE K+ QE+ G HNW+QF L+E + N+DY+GY+ R+ PD + Q+L +QF W ++K V ++ +GVSPEFE ALYT+ F Sbjct: 11 ELSKLFNELWDADQNRMKSGKDYRISL-QGKAGYVPAGSNQARDSASFPLFQFVDEEKLKSRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNNFLDAILETKVMKMAHDYLVRKNQAKPTRNDFKVQLYNIWFQLYSRAPGSRPDSCGFEHVFVGESKRG--QEMMGLHNWVQFYLQEKRKNIDYKGYV-ARQNKSRPDEDDQVLNLQFNWKEMVKPVGSSFIGVSPEFEFALYTIVF 246
BLAST of FC923754 vs. ExPASy Swiss-Prot
Match: ENDOU_XENTR (Poly(U)-specific endoribonuclease OS=Xenopus tropicalis GN=endou PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.819e-43 Identity = 98/240 (40.83%), Postives = 137/240 (57.08%), Query Frame = 1 Query: 31 DLSQGCYRLWELDSNRLVPGKDYEIDCGDGKKAY------QKDDMAQGSLFSWLSDDVFR-KPTYSRFCSLLDNYNPNAGHKEVVTSEEKQEQAAFIEEISRTAPIKYLHKYLSAKGIVSGNYQDFKRTISSLWFDLYGRG-GTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFCLEEAKGNVDYQGYIFPRRRGQVPDSETQLLTVQFEWNGILKSVSTTLVGVSPEFEIALYTLCF 726 +LS+ LW+ D NR+ GKDY I GK Y Q D A LF ++ ++ R + T++ F SLLDNY + G EVVT EE E F++ I T +K H YL K + DFK + ++WF LY R G S FEHVFVGE K+ +E+ G HNW+QF L+E + +DY+GY+ R+ PD + Q+L +QF W ++K + ++ +GVSPEFE ALYT+ F Sbjct: 12 ELSKLFNELWDADENRMKAGKDYRISL-QGKAGYVPAGSNQARDSASYPLFQFVDEEKLRSRKTFATFISLLDNYEMDTGVAEVVTPEEIAENNTFLDAILETKVMKIAHDYLVRKNQAKPSRNDFKAQLYTIWFQLYSRAPGQGPDSCGFEHVFVGESKRG--KEIMGLHNWVQFYLQEKRKTIDYKGYV-GRQNKSRPDHDDQVLNLQFSWKEMVKPIGSSFIGVSPEFEFALYTVVF 247
BLAST of FC923754 vs. ExPASy Swiss-Prot
Match: PP11_HUMAN (Placental protein 11 OS=Homo sapiens PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.882e-40 Identity = 92/241 (38.17%), Postives = 142/241 (58.92%), Query Frame = 1 Query: 13 SEEELADLSQGCYRLWELDSNRLVPGKDYEID---CGDGKKAYQKDDMAQGSLFSWLSDDVFRKPTYSRFCSLLDNYNPNAGHKEVVTSEEKQEQAAFIEEISRTAPIKYLHKYLSAKGIVSGNYQDFKRTISSLWFDLYGRGGTSSCSSAFEHVFVGEIKQAGEQEVSGFHNWLQFCLEEAKGNVDYQGYIFPRRRGQVPDSETQLLTVQFEWNGILKSVSTTLVGVSPEFEIALYTLCF 726 ++EE+ +S+ YR D+N+ +D ++ C + + D LF+++++ +F KPTY+ F +LL+NY GH E +++E EQ AF+ EI +TA +K L+ +L + G+ Q+F + ++WF LY RG SS FEHVF GE+K+ +V+GFHNW++F LEE +G VDY +I+ PD +L +QF W+G K V + +G SPEFE ALY+LCF Sbjct: 96 TKEEIQSISEKIYRA---DTNK-AQKEDIVLNSQNCISPSETRNQVDRCPKPLFTYVNEKLFSKPTYAAFINLLNNYQRATGHGEHFSAQELAEQDAFLREIMKTAVMKELYSFLHHQNRY-GSEQEFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEVKKG---KVTGFHNWIRFYLEEKEGLVDYYSHIYDGPWDSYPD----VLAMQFNWDGYYKEVGSAFIGSSPEFEFALYSLCF 324 The following BLAST results are available for this feature:
BLAST of FC923754 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923754 ID=FC923754; Name=FC923754; organism=Citrus clementina; type=EST; length=732bpback to top |