FC923755

Overview
NameFC923755
Unique NameFC923755
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923755 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana GN=ARR2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.940e-25
Identity = 94/251 (37.45%), Postives = 128/251 (51.00%), Query Frame = 1
Query:    1 QRNIFSFDNQKLRFGEGQPQHMSSGKQMNLLHGIPTTMDSKQLVNLHHSAQSLGSLNMQASAHGNPSGQSSPLLMQMAQPQSRGQILTETSGGQVPRLPTSVGHPILSNGAAGAMLARNGIGENSRGTGYNSVSQTSSVLNFPLNHSAELPGNSFPLGSTPGISAGMSTLTTKGGFQEEI-SSDIKG-----SGGF-MPSYDIFNDLQQHKPHN---------WELQNVGFAFDASQHSNSLQASVDVNTS 705
            QR+IF+F+N K+RFG+G  Q M++G   NLLHG+PT                 GS +M+     N   QSS +++ +A    RG      S GQ P L +SV      +   GA+  RN I E    T    +  T SV N   N  A+LP +SFPL S PGIS  +S       +QEE+ SSD KG     + GF  PSYDIFND  QH+ HN         W+L+N+G  F ++Q + +  A+   +TS
Sbjct:  347 QRSIFNFENPKIRFGDGHGQTMNNG---NLLHGVPT-----------------GS-HMRLRPGQNV--QSSGMMLPVADQLPRGGPSMLPSLGQQPILSSSVSR---RSDLTGALAVRNSIPE----TNSRVLPTTHSVFN---NFPADLPRSSFPLASAPGISVPVSV-----SYQEEVNSSDAKGGSSAATAGFGNPSYDIFNDFPQHQQHNKNISNKLNDWDLRNMGLVFSSNQDAATATATAAFSTS 559          
BLAST of FC923755 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana GN=ARR1 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.940e-25
Identity = 85/234 (36.32%), Postives = 121/234 (51.71%), Query Frame = 1
Query:    1 QRNIFSFDNQKLRFGEGQPQHMSSGK---QMNLLHGIPTTMDSK-QLVNLHHSAQSLGSLNMQASAHGNPSGQSSPLLMQMAQPQSRGQILTETSGGQVPRLPTSVGHPILSN--GAAGAMLARNGIGENSR--GTGYNSVSQTSSVLNFPLNH-SAELPGNSFPLGSTPGISAGMSTLTTKGGFQEEISSDIKGSGGFMPSYDIFNDLQQHKPHNWELQNVGFAFDASQHSNS 675
            +R+IFSFDN K RFGEG   H    +   QMNLLHG+PT +  +  + N     Q + ++    S   N  G   PL  Q + P+    +LT +         +S+  P+LSN          RN I E+SR   T Y +++   S  + P N+   ELP NSFPL S PGIS  +   T+   +QEE++S    +G   PSYD+F   Q    ++W+L+N+G AFD+ Q S S
Sbjct:  369 ERSIFSFDNTKTRFGEGLGHHGQQPQQQPQMNLLHGVPTGLQQQLPMGNRMSIQQQIAAVRAGNSVQNN--GMLMPLAGQQSLPRGPPPMLTSSQ--------SSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSSSMPYNNFQPELPVNSFPLASAPGISVPVRKATS---YQEEVNS--SEAGFTTPSYDMFTTRQ----NDWDLRNIGIAFDSHQDSES 583          
The following BLAST results are available for this feature:
BLAST of FC923755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ARR2_ARATH2.940e-2537.45Two-component response regulator ARR2 OS=Arabidops... [more]
ARR1_ARATH2.940e-2536.32Two-component response regulator ARR1 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionC31708F01EF StrClemenN Citrus clementina cDNA clone C31708F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923755 ID=FC923755; Name=FC923755; organism=Citrus clementina; type=EST; length=736bp
CAAAGGAACATTTTTAGCTTTGATAATCAGAAGTTAAGATTTGGAGAAGG
GCAACCACAACATATGAGCAGTGGCAAACAAATGAACTTACTACATGGAA
TTCCAACAACCATGGATTCGAAACAACTTGTCAATTTGCACCATTCTGCT
CAATCCCTCGGCAGCTTGAACATGCAAGCCAGTGCCCATGGAAACCCAAG
TGGCCAGAGTAGCCCTTTACTCATGCAAATGGCTCAACCGCAATCACGAG
GGCAGATACTAACTGAAACTAGTGGAGGTCAAGTTCCCAGGCTTCCAACA
TCTGTTGGGCATCCTATACTATCAAATGGGGCTGCTGGTGCAATGTTAGC
AAGAAATGGGATTGGTGAAAATAGTAGAGGGACAGGGTACAATTCAGTTT
CTCAAACATCTTCAGTGTTAAATTTCCCCTTAAACCACTCGGCAGAATTG
CCAGGCAATAGTTTCCCCCTAGGAAGTACACCGGGAATATCCGCAGGGAT
GTCCACTCTCACAACTAAAGGTGGATTTCAGGAAGAAATCAGCTCAGACA
TTAAAGGATCTGGAGGATTTATGCCAAGTTATGATATTTTTAATGATTTG
CAACAGCACAAACCCCACAACTGGGAGCTGCAGAATGTGGGCTTCGCCTT
TGATGCTTCTCAGCATTCAAACTCTCTGCAAGCCAGTGTTGATGTAAACA
CTTCAGTTTTAGTTAATCAAGGGATATCTTCTAGCC
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