FC923762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923762 vs. ExPASy Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.060e-41 Identity = 103/224 (45.98%), Postives = 124/224 (55.36%), Query Frame = 2 Query: 128 WARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGG--------RTGATPE-----GHHXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGN-QYLDQYSTGNNNQQQHGVAQKGYVGDSVVPVQCELAKQDHHRHQQNFQ 757 WA+ CDTCR+AACTVYC+AD AYLCS+CD++VH ANR+A RHERV VC+SCE+APAAF EIHSANPLARRHQRVPILPIS Y T PE G AASWLL + DE+L+LVDY+ + Q+ DQ N Q V Q+ Y D VVP+Q E++K ++ QQNFQ Sbjct: 8 WAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLGQEEEDEDEAEAASWLLPNSGKNSGNNNGFSIG---------DEFLNLVDYSSSDKQFTDQ---SNQYQLDCNVPQRSYGEDGVVPLQIEVSK-GMYQEQQNFQ 218
BLAST of FC923762 vs. ExPASy Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.868e-41 Identity = 104/227 (45.81%), Postives = 120/227 (52.86%), Query Frame = 2 Query: 83 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPEGHHXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGG--NQYLDQYSTGNNNQQQHGVAQKGYVGDSVVPVQCELAKQDHHRHQQNFQ 757 M+KEE WAR CDTCR+AACTVYC+AD AYLC+ CD+RVH ANRVA RHERV VC+SCE APAAF EIHSANPLARRHQRVPILP+S + A E ASWLL + EYLDLVDY+ NQ+ D NQ H Q+ + GD VVP+Q E + + QQNFQ Sbjct: 1 MLKEESNESGT----WARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSANSCSSM--APSETDADNDEDDREVASWLLPNPGKNIGNQNNGFLFGV--------EYLDLVDYSSSMDNQFED-------NQYTH--YQRSFGGDGVVPLQVEESTSHLQQSQQNFQ 204
BLAST of FC923762 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.769e-39 Identity = 102/244 (41.80%), Postives = 124/244 (50.82%), Query Frame = 2 Query: 83 MMKEEXXXXXXXXXXWARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGG---------RTGATPEGH--------HXXXXXXXXAASWLLLSXXXXXXXXXXXXXXXXXXXXXEVDEYLDLVDYTGGNQYLDQYSTG--NNNQQQHGVAQKGYVGDSVVPVQCELAKQDHHRHQQNFQ 757 M+K+E AR CDTCR+ ACTVYC AD AYLC +CD++VH ANRVA RH+RV VCESCE+APAAF E+HSANPLARRHQRVPILPISG+ + +T PE ASWL + DEYL+LVDY N +D TG + +QQ V Q Y GD VVP++ E ++ +QQNFQ Sbjct: 1 MLKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDPEKRLVVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLLFS--------DEYLNLVDY---NSSMDYKFTGEYSQHQQNCSVPQTSYGGDRVVPLKLEESRGHQCHNQQNFQ 233
BLAST of FC923762 vs. ExPASy Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 9.011e-25 Identity = 54/123 (43.90%), Postives = 75/123 (60.98%), Query Frame = 2 Query: 131 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYGGRTGATPEGHHXXXXXXXXAASWLL 499 +R+CD+C++ A T++C+AD A+LC CD ++H AN++A RHERV++CE CEQAPA +IHSANPL+RRH+RVPI P +V G A+ + ASWLL Sbjct: 5 SRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAV-GPAKSASSSVNFVDEDGGDVTASWLL 126
BLAST of FC923762 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23 Identity = 57/137 (41.61%), Postives = 77/137 (56.20%), Query Frame = 2 Query: 131 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISGSVYG-GRTGATP------------EGHHXXXXXXXXAASWLLL 502 +++CD+C++A +YC+ D A+LC +CDS+VH AN++A RH RV++CE CEQAPA +IHSANPLARRH+RVP+ P SV G T +G+ AASWLLL Sbjct: 3 SKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSVKHTAVNFLDDCYFSDIDGNGSREEEEEEAASWLLL 139
BLAST of FC923762 vs. ExPASy Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.658e-19 Identity = 44/89 (49.44%), Postives = 55/89 (61.80%), Query Frame = 2 Query: 131 ARVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPI 397 AR CD C++ V+C+ D A+LC ACD+R+H RHERV+VCE CEQAPAA +IHSANPLA RH+RVP+ Sbjct: 19 ARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVWVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPV 103
BLAST of FC923762 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 2 Query: 134 RVCDTCRAAACTVYCKADMAYLCSACDSRVHVANRVAFRHERVFVCESCEQAPAAFXXXXXXXXXXXXXXXEIHSANPLARRHQRVPILPISG 412 R+CD C ++ VYCKAD A LC ACD +VHVAN++ +H R +C+SC ++P++ + H+A+ + H R P +G Sbjct: 11 RLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHHTAS--SSLHSRRPFEGFTG 101 The following BLAST results are available for this feature:
BLAST of FC923762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923762 ID=FC923762; Name=FC923762; organism=Citrus clementina; type=EST; length=758bpback to top |