FC923765

Overview
NameFC923765
Unique NameFC923765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923765 vs. ExPASy Swiss-Prot
Match: HGNAT_MOUSE (Heparan-alpha-glucosaminide N-acetyltransferase OS=Mus musculus GN=Hgsnat PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 61/183 (33.33%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  195 SKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK-----KIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPN--VLEPRHLSI--FTAYQWQWIGGFIAFVIYIITTYSLYVP 716
            + R+  +D FRGL +VLM+ V+  GG Y    HS WNG T+AD V P+F+FI+G +I L++  + +  G  K     KI++R+  L+  G+I+       P+     +    +R  G+LQR+ + Y VVA++E    K  P+   LE    S+   T+   QW+       I++  T+ L VP
Sbjct:  258 ANRLRCVDTFRGLALVLMVFVNYGGGKYWYFKHSSWNGLTVADLVFPWFVFIMGTSIFLSMTSILQ-RGCSKFKLLGKIVWRSFLLICIGVIIVN-----PNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLEFFFWKPVPDSCTLESSCFSLRDITSSWPQWLTILTLESIWLALTFFLPVP 434          
BLAST of FC923765 vs. ExPASy Swiss-Prot
Match: HGNAT_HUMAN (Heparan-alpha-glucosaminide N-acetyltransferase OS=Homo sapiens GN=HGSNAT PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 59/181 (32.60%), Postives = 97/181 (53.59%), Query Frame = 3
Query:  201 RVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKKVPKINGAVK-----KIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPN--VLEPRHLSI--FTAYQWQWIGGFIAFVIYIITTYSLYVP 716
            R+ ++D FRG+ ++LM+ V+  GG Y    H+ WNG T+AD V P+F+FI+G +I L++  + +  G  K     KI +R+  L+  GII+       P+     +    +R  G+LQR+ + Y VVA++E L  K  P     E   LS+   T+   QW+   +   +++  T+ L VP
Sbjct:  267 RLRSVDTFRGIALILMVFVNYGGGKYWYFKHASWNGLTVADLVFPWFVFIMGSSIFLSMTSILQ-RGCSKFRLLGKIAWRSFLLICIGIIIVN-----PNYCLGPLSWDKVRIPGVLQRLGVTYFVVAVLELLFAKPVPEHCASERSCLSLRDITSSWPQWLLILVLEGLWLGLTFLLPVP 441          
The following BLAST results are available for this feature:
BLAST of FC923765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HGNAT_MOUSE3.731e-1733.33Heparan-alpha-glucosaminide N-acetyltransferase OS... [more]
HGNAT_HUMAN7.037e-1632.60Heparan-alpha-glucosaminide N-acetyltransferase OS... [more]
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Properties
Property NameValue
Genbank descriptionC31708F11EF StrClemenN Citrus clementina cDNA clone C31708F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923765 ID=FC923765; Name=FC923765; organism=Citrus clementina; type=EST; length=727bp
GAGCATCAAGTATTATTATGGCTGATCTTAGGATAGTGGAAGAAGGGTTA
GGGCGTACCCAACTTGTTGAACAAGAACAAGACGATGGTAAAGACAGTGA
AAATGGCATAAACAAGGAGAAAGGGCTGGAGAGGAGTGAAGTGCAGGATG
AACAGAAAGGAGAGCTGCAGCTGCAACAGCTTCTGCAGCAGAAGAGTAAG
AGAGTTGCAACCTTGGATGCATTTAGAGGTCTTACTGTTGTGTTGATGAT
ATTAGTAGACGATGCTGGGGGTGCATATGCACGCATTGATCACTCGCCAT
GGAATGGCTGCACGCTGGCTGACTTTGTGATGCCATTCTTTCTCTTCATT
GTTGGGGTTGCAATCGCACTCGCTCTCAAGAAAGTTCCTAAGATCAATGG
TGCAGTTAAGAAGATAATTTTTAGGACGCTGAAGCTTCTATTTTGGGGAA
TTATCTTGCAAGGAGGATACTCACACGCCCCTGATGCTCTCTCATACGGA
GTTGACATGAAGCACATTCGATGGTGTGGCATTCTCCAGAGAATAGCATT
AGTGTACGTAGTCGTTGCTCTAATTGAGACCTTAACCACCAAGAGAAGAC
CTAATGTCCTGGAACCTCGGCACCTCTCAATTTTCACTGCATATCAGTGG
CAATGGATTGGAGGATTCATCGCATTTGTCATATACATTATCACAACATA
CTCACTATATGTCCCAAATTGGAGTTT
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