FC923768

Overview
NameFC923768
Unique NameFC923768
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length674
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSJ (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. japonica GN=CDKG-2 PE=2 SV=2)

HSP 1 Score: 408.297 bits (1048), Expect = 1.867e-113
Identity = 188/221 (85.07%), Postives = 211/221 (95.48%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            +ME MKQP+SQSEVKCLMLQLLEG+KYLHDNWVLHRDLKTSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVV LWYRAPELLLG+K+YSTAIDMWS+GCIMAELL+KEPLFNGK+EF+QLDKIF+TLGTPNEKIWPG++KLPGVKVNF+K  YN LR KFPA SF+G P+LS+AGFDLLN+LLTYDP+KR++A+AAL H+WFREVPLPKSKDFMPTFPA
Sbjct:  453 VMEAMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFPA 673          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDKG2_ORYSI (Cyclin-dependent kinase G-2 OS=Oryza sativa subsp. indica GN=CDKG-2 PE=2 SV=1)

HSP 1 Score: 408.297 bits (1048), Expect = 1.867e-113
Identity = 188/221 (85.07%), Postives = 211/221 (95.48%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            +ME MKQP+SQSEVKCLMLQLLEG+KYLHDNWVLHRDLKTSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVV LWYRAPELLLG+K+YSTAIDMWS+GCIMAELL+KEPLFNGK+EF+QLDKIF+TLGTPNEKIWPG++KLPGVKVNF+K  YN LR KFPA SF+G P+LS+AGFDLLN+LLTYDP+KR++A+AAL H+WFREVPLPKSKDFMPTFPA
Sbjct:  453 VMEAMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGTKEYSTAIDMWSVGCIMAELLAKEPLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGRPILSEAGFDLLNNLLTYDPEKRLSADAALQHEWFREVPLPKSKDFMPTFPA 673          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.085e-108
Identity = 185/221 (83.71%), Postives = 201/221 (90.95%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            +METMKQP+SQSEVKCLMLQLLEG+KYLHDNWVLHRDLKTSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVV LWYRAPELLLG+K YSTAIDMWSLGCIM ELLSK PLFNGKSE DQLDKIF+TLGTP+E IWPG+SKLPG  V F K  +N LR KF A SFTG P+LS+AGFDLLN LLTYDP+KRI+AE ALNH+WFRE+PLP+SKDFMPTFPA
Sbjct:  437 VMETMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPA 657          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 3.085e-108
Identity = 185/221 (83.71%), Postives = 201/221 (90.95%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVKVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            +METMKQP+SQSEVKCLMLQLLEG+KYLHDNWVLHRDLKTSNLLLNNRGELKICDFGL+RQYGSPLKPYT LVV LWYRAPELLLG+K YSTAIDMWSLGCIM ELLSK PLFNGKSE DQLDKIF+TLGTP+E IWPG+SKLPG  V F K  +N LR KF A SFTG P+LS+AGFDLLN LLTYDP+KRI+AE ALNH+WFRE+PLP+SKDFMPTFPA
Sbjct:  437 VMETMKQPYSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSKGPLFNGKSEIDQLDKIFRTLGTPDENIWPGYSKLPGATVKFGKQTHNRLRDKFRAVSFTGGPMLSEAGFDLLNRLLTYDPEKRISAEDALNHEWFRELPLPRSKDFMPTFPA 657          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CD11B_HUMAN (Cell division protein kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3)

HSP 1 Score: 300.827 bits (769), Expect = 4.199e-81
Identity = 145/222 (65.32%), Postives = 177/222 (79.73%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGV-KVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            LMETMKQPF   EVK LM+QLL G+K+LHDNW+LHRDLKTSNLLL++ G LK+ DFGLAR+YGSPLK YT +VV LWYRAPELLLG+K+YSTA+DMWS+GCI  ELL+++PLF GKSE DQ++K+FK LGTP+EKIWPG+S+LP V K+ F +H YN LRK+F A       +LSD GFDL+N  LTY P +RI+AE  L H++FRE PLP      PT+PA
Sbjct:  526 LMETMKQPFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSEIDQINKVFKDLGTPSEKIWPGYSELPAVKKMTFSEHPYNNLRKRFGA-------LLSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPA 740          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDK11_MOUSE (Cell division protein kinase 11 OS=Mus musculus GN=Cdk11 PE=1 SV=2)

HSP 1 Score: 295.434 bits (755), Expect = 1.764e-79
Identity = 143/222 (64.41%), Postives = 175/222 (78.83%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGV-KVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            LMETMKQPF   EVK LM+QLL G+K+LHDNW+LHRDLKTSNLLL++ G LK+ DFGLAR+YGSPLK YT +VV LWYRAPELLLG+K+YSTA+DMWS+GCI  ELL+++PLF GKS+ DQ++KIFK LGTP+EKIWPG++ LP V K+ F ++ YN LRK+F A       +LSD GFDL+N  LTY P +RI AE  L H++FRE PLP      PT+PA
Sbjct:  515 LMETMKQPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDLGTPSEKIWPGYNDLPAVKKMTFSEYPYNNLRKRFGA-------LLSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRETPLPIDPSMFPTWPA 729          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CD11A_HUMAN (Cell division protein kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=3)

HSP 1 Score: 295.434 bits (755), Expect = 1.764e-79
Identity = 143/222 (64.41%), Postives = 175/222 (78.83%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGV-KVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            LMETMKQPF   EVK LM+QLL G+K+LHDNW+LHRDLKTSNLLL++ G LK+ DFGLAR+YGSPLK YT +VV  WYRAPELLLG+K+YSTA+DMWS+GCI  ELL+++PLF G SE DQ++K+FK LGTP+EKIWPG+S+LP V K+ F +H YN LRK+F A       +LSD GFDL+N  LTY P +RI+AE  L H++FRE PLP      PT+PA
Sbjct:  511 LMETMKQPFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYGSPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGNSEIDQINKVFKELGTPSEKIWPGYSELPVVKKMTFSEHPYNNLRKRFGA-------LLSDQGFDLMNKFLTYFPGRRISAEDGLKHEYFRETPLPIDPSMFPTWPA 725          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.143e-78
Identity = 143/222 (64.41%), Postives = 173/222 (77.93%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGV-KVNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            LMETMKQPF   EVK LM+QLL G+K+LHDNW+LHRDLKTSNLLL + G LK+ DFGLAR+YGSPLK YT +VV LWYRAPELLLG+K+YSTA DMWS+GCI  ELL+++PLF GKS+ DQ++KIFK +GTP+EKIWPG+S+LP V K+ F +  YN LRK+F A       +LSD GFDL+N  LTY P +RI AE  L H++FRE PLP      PT+PA
Sbjct:  167 LMETMKQPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLTHAGILKVGDFGLAREYGSPLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDIGTPSEKIWPGYSELPAVKKMTFSELPYNNLRKRFGA-------LLSDQGFDLMNKFLTYYPGRRINAEDGLKHEYFRETPLPIDPSMFPTWPA 381          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: KP58_DROME (Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.073e-68
Identity = 133/230 (57.83%), Postives = 163/230 (70.87%), Query Frame = 2
Query:    2 LMETMK---QPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVK------VNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPA 664
            LMETMK   Q F   EVKCL  QLL  + +LHDNW+LHRDLKTSNLLL+++G LK+ DFGLAR+YGSP+K YT LVV LWYRAPELLL S  YST ID+WS+GCI AE L   PLF GKSE D+L++IFK LGTPNEKIWPG+++LP VK        F ++  + LRK F   +       S+ G  LL  LLTYDP +R++A+AAL H +F+E+PLP      PT+PA
Sbjct:  646 LMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILKVGDFGLAREYGSPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFAEFLQMLPLFPGKSEIDELNRIFKELGTPNEKIWPGYTELPAVKNMLSQNSQFTEYPVSQLRKHFQEKT-------SEMGLSLLQGLLTYDPKQRLSADAALKHGFFKELPLPIDPSMFPTWPA 868          
BLAST of FC923768 vs. ExPASy Swiss-Prot
Match: CDK11_DICDI (PITSVRE serine/threonine protein-kinase cdk11 OS=Dictyostelium discoideum GN=cdk11 PE=3 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 3.451e-67
Identity = 127/224 (56.70%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    2 LMETMKQPFSQSEVKCLMLQLLEGIKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVILWYRAPELLLGSKQYSTAIDMWSLGCIMAELLSKEPLFNGKSEFDQLDKIFKTLGTPNEKIWPGFSKLPGVK-VNFIKHQYNLLRKKFPATSFTGSPVLSDAGFDLLNSLLTYDPDKRITAEAALNHDWFREVPLPKSKDFMPTFPAXH 670
            LME +K+PF  SE+K L+ QLL G+ Y+HDNWV+HRDLKT+NLL  N+G LKI DFGLAR+YGSPLKP +  VV LWYRAPELLL ++ Y+ AID+WS+GCI AE++SKE L  G SE DQ+DKIFK  GTP EK WP F KLP  K  N     YN L+ KFP         ++D  FDLLN LL  +P+ RI+A  AL H +F E P P+    MPT+P+ H
Sbjct:  140 LMEVIKKPFLPSEIKTLIQQLLNGVSYMHDNWVIHRDLKTANLLYTNKGVLKIADFGLAREYGSPLKPLSKGVVTLWYRAPELLLDTEIYTPAIDIWSVGCIFAEIISKEVLLQGSSEIDQMDKIFKLFGTPTEKSWPAFFKLPLAKYFNLTDQPYNNLKSKFPH--------ITDNAFDLLNKLLELNPEARISASDALKHPYFFENPQPRDPLLMPTWPSSH 355          
The following BLAST results are available for this feature:
BLAST of FC923768 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKG2_ORYSJ1.867e-11385.07Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG2_ORYSI1.867e-11385.07Cyclin-dependent kinase G-2 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSJ3.085e-10883.71Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI3.085e-10883.71Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CD11B_HUMAN4.199e-8165.32Cell division protein kinase 11B OS=Homo sapiens G... [more]
CDK11_MOUSE1.764e-7964.41Cell division protein kinase 11 OS=Mus musculus GN... [more]
CD11A_HUMAN1.764e-7964.41Cell division protein kinase 11A OS=Homo sapiens G... [more]
CDK11_RAT1.143e-7864.41Cell division protein kinase 11 OS=Rattus norvegic... [more]
KP58_DROME1.073e-6857.83Serine/threonine-protein kinase PITSLRE OS=Drosoph... [more]
CDK11_DICDI3.451e-6756.70PITSVRE serine/threonine protein-kinase cdk11 OS=D... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31708G02EF StrClemenN Citrus clementina cDNA clone C31708G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923768 ID=FC923768; Name=FC923768; organism=Citrus clementina; type=EST; length=674bp
ACTGATGGAGACAATGAAGCAACCATTTAGTCAGAGTGAAGTAAAATGCT
TGATGCTCCAGCTATTGGAGGGTATTAAGTATCTTCATGATAATTGGGTG
CTTCATAGGGATTTGAAAACTTCCAACCTGCTTTTAAATAACCGAGGTGA
GTTGAAGATCTGTGATTTTGGGCTGGCTCGTCAATATGGGAGCCCACTGA
AACCTTATACTCATTTGGTAGTTATCCTTTGGTACAGGGCACCTGAACTT
CTATTGGGATCAAAACAGTATTCAACGGCAATTGACATGTGGTCTTTGGG
TTGTATCATGGCTGAGCTATTATCAAAGGAGCCACTGTTCAATGGGAAAA
GTGAATTTGATCAACTTGACAAGATCTTTAAAACTCTTGGTACTCCTAAT
GAGAAAATTTGGCCTGGGTTTTCTAAGCTGCCTGGAGTTAAGGTCAACTT
TATCAAGCATCAGTATAATCTATTGCGCAAGAAATTCCCAGCAACATCTT
TCACTGGATCACCAGTTTTATCTGATGCTGGCTTTGATTTATTAAACTCA
CTGTTAACATATGATCCTGACAAGCGGATAACAGCTGAAGCTGCACTTAA
TCATGATTGGTTCCGTGAAGTTCCACTTCCGAAGTCCAAAGATTTTATGC
CTACTTTTCCTGCTNCACATGCTC
back to top