FC923771

Overview
NameFC923771
Unique NameFC923771
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length763
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.347e-33
Identity = 97/248 (39.11%), Postives = 120/248 (48.39%), Query Frame = 1
Query:  121 VASHADISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYVGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTS--NGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECEDPGIK-ESKILCNSLES 759
            VA  AD++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+YVGV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+K I+ECE   +  E K    SLES
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLES 264          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31
Identity = 68/114 (59.65%), Postives = 82/114 (71.93%), Query Frame = 1
Query:  421 PVYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECEDPGIK-ESKILCNSLES 759
            PV+V V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M + +++CE P  + E K    SLES
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLES 298          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.482e-16
Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 1
Query:  484 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECE-DPGIKESKILCNSLES 759
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M+  + ECE  P   E+K    SLES
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLES 113          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.120e-14
Identity = 46/106 (43.40%), Postives = 61/106 (57.55%), Query Frame = 1
Query:  460 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECEDPGI------KESKILCNSLES 759
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M+  +  CE   I      K       SLES
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLES 157          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14
Identity = 47/113 (41.59%), Postives = 60/113 (53.10%), Query Frame = 1
Query:  424 VYVGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECEDPGIK-ESKILCNSLES 759
            V +   P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++  + ECE P  K E K    SLES
Sbjct:   83 VQIRYGPNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLES 194          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.261e-14
Identity = 47/100 (47.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:  475 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECEDPGIK-ESKILCNSLES 759
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M   +++CE P  K E K    SLES
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLES 452          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  436 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECE 711
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M   + ECE
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECE 133          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.369e-12
Identity = 42/85 (49.41%), Postives = 54/85 (63.53%), Query Frame = 1
Query:  460 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQKHIKECE 711
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+  + ECE
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECE 166          
BLAST of FC923771 vs. ExPASy Swiss-Prot
Match: BURP7_ORYSJ (BURP domain-containing protein 7 OS=Oryza sativa subsp. japonica GN=BURP7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 1
Query:  502 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIM 687
            +FFLEKDL PG K+ LHFT+ + GA  L R  A S P +++KLPEI +Q SV  GS  A+ M
Sbjct:   64 VFFLEKDLFPGSKLTLHFTRATAGAALLPRGRADSVPLATEKLPEILSQLSVPAGSPAADAM 125          
The following BLAST results are available for this feature:
BLAST of FC923771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
RD22_ARATH5.347e-3339.11Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ6.536e-3159.65BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP6_ORYSJ3.482e-1650.54BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP2_ORYSJ1.120e-1443.40BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP5_ORYSJ4.257e-1441.59BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ7.261e-1447.00BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP1_ORYSJ2.112e-1344.57BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ1.369e-1249.41BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURP7_ORYSJ5.753e-1153.23BURP domain-containing protein 7 OS=Oryza sativa s... [more]
back to top
Properties
Property NameValue
Genbank descriptionC31708G05EF StrClemenN Citrus clementina cDNA clone C31708G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923771 ID=FC923771; Name=FC923771; organism=Citrus clementina; type=EST; length=763bp
GATGAAGCCTAGATTTTAGATTACATACTATCTTGTATTCTGGGTGTCTT
TTAAAACATACTCAAAGCTATAATGGAGTTTCACTTGTTGCCCATCCTTG
CTTTCCTCAGTCTAGCACTGGTAGCAAGTCATGCTGACATTTCTCCTGAG
CTTTACTGGAAAACTGTACTGCCAAATTCCCCGATGCCAAAAGCTGTCAA
AGATCTTCTACAGCCAGATGTGCTGGAAGACAAAAGCACCTCTGTCAACG
TAGGGAAGGGTGGTGTCAATGTGGATGCAGGGAAAGGAAAGCCCGGTGGT
GGCACCCATGTGAATGTTGGGGGTAAGGGCGTTGGTGTAAACACTGGAAA
GCCTGACAAAAGAACCAGTGTTGGTGTTGGCAAAGGAGGAGTATCCGTAA
GTACAGGACACAAGGGAAAGCCAGTTTATGTTGGAGTAAGCCCATTCAAC
TATGTATATGCTGCAAATGAGAACCAACTCCATGATGACCCGAATACAGC
TCTTTTCTTCTTGGAAAAGGACTTGCATCCTGGCATGAAGATGAACTTGC
ACTTCACTCAAACTTCAAATGGAGCAACTTTCTTATCTCGCCAAGCTGCC
AAATCAACTCCTTTCTCGTCTGACAAATTGCCTGAGATCTTTAACCAGTT
TTCCGTGAAACCTGGATCAGTTGAAGCTGAAATAATGCAGAAACACATCA
AAGAGTGTGAAGACCCTGGCATTAAGGAGAGCAAAATATTGTGCAACTCA
CTGGAGTCATGAT
back to top