FC923773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 8.892e-51 Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 308 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP Sbjct: 222 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 323
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.244e-44 Identity = 86/102 (84.31%), Postives = 98/102 (96.08%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 308 FEEG+IGTPQ+TDS+VLPENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP+KF I+N+NAQSWLLTTYLD++LRISR DAGSVFV IKEGSPLL P Sbjct: 225 FEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSWLLTTYLDDELRISRGDAGSVFVLIKEGSPLLKP 326
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.063e-43 Identity = 83/102 (81.37%), Postives = 96/102 (94.12%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 308 FEEG+IGTPQ+TDS+VLPENVEFLGQKID+SPFKG+++SVQDTASSV K+ISSQPP+KF I+N+NAQSWLLTTYLD++LRI R DAGSVFV IKEGSPLL P Sbjct: 225 FEEGIIGTPQLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSWLLTTYLDDELRIPRGDAGSVFVLIKEGSPLLKP 326
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.170e-40 Identity = 78/100 (78.00%), Postives = 91/100 (91.00%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 302 FEEGVIGTPQ+TDS+V+P+NV+FLGQKID +PF GI+SS+QDTAS+VAKTISSQPP+KFSISN+ +SWLLTTYLDEDLRISR D GSVFV +KEGS L Sbjct: 221 FEEGVIGTPQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVESWLLTTYLDEDLRISRGDGGSVFVLLKEGSSFL 320
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 5.407e-40 Identity = 79/102 (77.45%), Postives = 92/102 (90.20%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 308 FEEGVIGTPQ+TDS+ +PE VEFLGQKIDL+P +G+L+SVQDTA+SVA+TISSQPPLKFS+ +AQSWLLTTYLD+D+RISR D GSVFV IKEGSPLL P Sbjct: 218 FEEGVIGTPQLTDSIEIPEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP 319
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.573e-39 Identity = 79/102 (77.45%), Postives = 91/102 (89.22%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 308 FE+GVIGTPQ+TDS+ +PE VE LGQKIDL+P +G+L+SVQDTASSVA+TISSQPPLKFS+ NAQSWLLTTYLD+D+RISR D GSVFV IKEGSPLL P Sbjct: 209 FEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP 310
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.020e-38 Identity = 77/102 (75.49%), Postives = 91/102 (89.22%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 308 FE+GVIGTPQ+TDS+ +PE+VE LGQKIDL+P KG+L+SVQDTASSVA+TIS+QPPLKFS+ + N QSWLLTTYLD+DLRISR D GSV+V IKEGS LL P Sbjct: 217 FEQGVIGTPQLTDSIEIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPPLKFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVLIKEGSSLLNP 318
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 2.272e-38 Identity = 78/102 (76.47%), Postives = 90/102 (88.24%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLLMP 308 FE+GVIGTPQ+TDS+ +PE VE LGQKIDL+P KG+L+SVQDTASSVA+TISSQPPLKFS+ +AQSWLLTTYLD+DLRISR D GSVFV I+EGS LL P Sbjct: 226 FEQGVIGTPQLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSWLLTTYLDKDLRISRGDGGSVFVLIREGSSLLNP 327
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.200e-33 Identity = 67/100 (67.00%), Postives = 80/100 (80.00%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 302 F+EG+IGTPQ+TDS+VLPE E GQ IDL+P KGI SS+++ ASSVA+TIS QPPLK I NA+SWLLTTYLD++LRISR D S+FV KEGS LL Sbjct: 219 FDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDNAESWLLTTYLDDELRISRGDGSSIFVLFKEGSTLL 318
BLAST of FC923773 vs. ExPASy Swiss-Prot
Match: PAP3_ORYSJ (Probable plastid-lipid-associated protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP3 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.981e-22 Identity = 53/101 (52.48%), Postives = 72/101 (71.29%), Query Frame = 3 Query: 3 FEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSI-SNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 302 F+EG P+++ S+ LP V+ GQKI L P + +L+ +Q +S+A +IS QPPLK I N+ A+SWLLTTYLD+DLRISR D G +F+ +KEGSPLL Sbjct: 272 FKEGSFQPPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNNRARSWLLTTYLDKDLRISRGD-GGLFILVKEGSPLL 371 The following BLAST results are available for this feature:
BLAST of FC923773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923773 ID=FC923773; Name=FC923773; organism=Citrus clementina; type=EST; length=556bpback to top |