FC923784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH_DICDI (Clathrin heavy chain OS=Dictyostelium discoideum GN=chcA PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.842e-55 Identity = 95/157 (60.51%), Postives = 127/157 (80.89%), Query Frame = 1 Query: 1 VSAVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDELVKD 471 V+A+NEALNE+YVEEEDYE LR SID + NF I LAQK+EKHELLE RR+AAY+YKK RW QS+ LSKKDK+YKDA+++AS S + + EELL YF++Q FA+CL+ CYD ++PD +EL+W NN+++++FPYL+Q+++EYT KVD+LV D Sbjct: 1461 VAALNEALNELYVEEEDYESLRSSIDANSNFGTIALAQKLEKHELLEFRRIAAYLYKKNNRWAQSVELSKKDKLYKDAIQSASDSKNPAIGEELLQYFVDQQNNSAFAACLYTCYDFLKPDAVIELAWRNNILNYSFPYLIQYVKEYTTKVDQLVDD 1617
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH_RAT (Clathrin heavy chain 1 OS=Rattus norvegicus GN=Cltc PE=1 SV=3) HSP 1 Score: 206.453 bits (524), Expect = 1.218e-52 Identity = 91/152 (59.87%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 7 AVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDEL 462 +VNE+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W +N++DFA PY +Q ++EY KVD+L Sbjct: 1462 SVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH_MOUSE (Clathrin heavy chain 1 OS=Mus musculus GN=Cltc PE=1 SV=3) HSP 1 Score: 206.453 bits (524), Expect = 1.218e-52 Identity = 91/152 (59.87%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 7 AVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDEL 462 +VNE+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W +N++DFA PY +Q ++EY KVD+L Sbjct: 1462 SVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH1_HUMAN (Clathrin heavy chain 1 OS=Homo sapiens GN=CLTC PE=1 SV=5) HSP 1 Score: 206.453 bits (524), Expect = 1.218e-52 Identity = 91/152 (59.87%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 7 AVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDEL 462 +VNE+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W +N++DFA PY +Q ++EY KVD+L Sbjct: 1462 SVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH1_BOVIN (Clathrin heavy chain 1 OS=Bos taurus GN=CLTC PE=1 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.218e-52 Identity = 91/152 (59.87%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 7 AVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDEL 462 +VNE+LN +++ EEDY+ LR SID +DNFD I LAQ++EKHEL+E RR+AAY++K RWKQS+ L KKD +YKDAM+ AS+S D ELAEELL +F+++ K+ECF +CLF CYDL+RPDV LE +W +N++DFA PY +Q ++EY KVD+L Sbjct: 1462 SVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQWFLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKL 1613
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH_DROME (Clathrin heavy chain OS=Drosophila melanogaster GN=Chc PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.714e-52 Identity = 94/152 (61.84%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 7 AVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDEL 462 A+NEALN + ++EEDY+ LR SID DNFD I LAQK+EKHEL E RR+AAY+YK RWKQS+ L KKDK+YKDAME A++S +++AEELL +F+E+ +CFA+CL+ CYDL+RPDV LEL+W + ++DFA PYL+Q +REYT KVD+L Sbjct: 1463 AINEALNGLLIDEEDYQGLRNSIDGFDNFDNIALAQKLEKHELTEFRRIAAYLYKGNNRWKQSVELCKKDKLYKDAMEYAAESCKQDIAEELLGWFLERDAYDCFAACLYQCYDLLRPDVILELAWKHKIVDFAMPYLIQVLREYTTKVDKL 1614
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH2_HUMAN (Clathrin heavy chain 2 OS=Homo sapiens GN=CLTCL1 PE=1 SV=2) HSP 1 Score: 201.445 bits (511), Expect = 3.919e-51 Identity = 90/152 (59.21%), Postives = 121/152 (79.61%), Query Frame = 1 Query: 7 AVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDEL 462 +VNEALN + EEEDY+ LR SID +DNFD I LAQ++EKH+L+E R +AAY+YK W QS+ L KKD +YKDAM+ A++S D ELA++LL +F+E+GK+ECFA+CLF CYDL+RPD+ LEL+W +N++D A PY +Q +REY KVD+L Sbjct: 1462 SVNEALNHLLTEEEDYQGLRASIDAYDNFDNISLAQQLEKHQLMEFRCIAAYLYKGNNWWAQSVELCKKDHLYKDAMQHAAESRDAELAQKLLQWFLEEGKRECFAACLFTCYDLLRPDMVLELAWRHNLVDLAMPYFIQVMREYLSKVDKL 1613
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH_CAEEL (Probable clathrin heavy chain 1 OS=Caenorhabditis elegans GN=chc-1 PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.460e-45 Identity = 81/158 (51.27%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 7 AVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDELVKDKIE 480 A+NEALN++ ++EED+ LR SI+ DNFD I LAQ++EKH L+E RR++AY++K RWKQSI L KKDK+YKDAME A++S + ELAEELL +F+++ +CFA+ L+ CYDL+ PDV +EL+W + ++D+A PY++Q +R+Y ++++L + + E Sbjct: 1464 AINEALNQLLIDEEDHAGLRSSIEAQDNFDNITLAQQLEKHPLVEFRRISAYLFKGNNRWKQSIELCKKDKLYKDAMEYAAESRNGELAEELLSFFLDEKLYDCFAASLYHCYDLLHPDVIMELAWKHKIMDYAMPYMIQVMRDYQTRLEKLERSEHE 1621
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH_SCHPO (Probable clathrin heavy chain OS=Schizosaccharomyces pombe GN=chc1 PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42 Identity = 80/162 (49.38%), Postives = 113/162 (69.75%), Query Frame = 1 Query: 1 VSAVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDELVKDKIEAQ 486 + AVN A N++ +E EDY+ L++SI+ +D+FD I LA+++EKH LLE RR+AAYIY+K RW QSI LSK+D+ YKDA+ TA S +AE+L+ YF+E G ECFA+ L+ CY L+R D+ +E+SW + D+A+PY + F E KV L KD + Q Sbjct: 1455 IQAVNHAYNDLLIEMEDYQSLQDSIENYDHFDAIALARRLEKHSLLEFRRIAAYIYRKNKRWTQSIELSKQDRFYKDAIITARDSDQTTIAEDLMKYFVEIGNYECFAAILYTCYHLLRNDLVMEISWRKGLQDYAYPYFINFQCEMFSKVLNLEKDLKDRQ 1616
BLAST of FC923784 vs. ExPASy Swiss-Prot
Match: CLH_YEAST (Clathrin heavy chain OS=Saccharomyces cerevisiae GN=CHC1 PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33 Identity = 57/156 (36.54%), Postives = 111/156 (71.15%), Query Frame = 1 Query: 4 SAVNEALNEIYVEEEDYERLRESIDMHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKVYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDELVKD 471 S VN+A +++ +EEEDY+ L++++D +D FDQ+GLA ++E H+L+ +++ A +Y++ +W +S+++ K++K++KDA+ETA+ S D ++ E LL YF+E G +E F + L+ Y+L+R + LE+SWMN++ D+ P+ + +E + ++ ++ Sbjct: 1467 SVVNQAYHDLMIEEEDYKALQDAVDSYDKFDQLGLASRLESHKLIFFKKIGALLYRRNKKWAKSLSILKEEKLWKDAIETAAISQDPKVVEALLTYFVETGNREGFVALLYAAYNLVRIEFVLEISWMNSLEDYIKPFEISIKKEQNDSIKKITEE 1622 The following BLAST results are available for this feature:
BLAST of FC923784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923784 ID=FC923784; Name=FC923784; organism=Citrus clementina; type=EST; length=721bpback to top |