FC923825

Overview
NameFC923825
Unique NameFC923825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_THEMA (Anthranilate synthase component II OS=Thermotoga maritima GN=trpGD PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.173e-28
Identity = 60/115 (52.17%), Postives = 84/115 (73.04%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGEL--GYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            +IVIDNYDSF YN+ QY+GE+      EV+RNDE+T+EE++RKNP  ++ISPGP  P+++GIS+  V      VP+ GVC+G Q IG AFGGKIV +   ++HGK+S + ++ KG
Sbjct:   47 VIVIDNYDSFVYNIVQYIGEVEPDCEIEVFRNDEITIEEIERKNPTHIVISPGPGRPEEAGISVDVVRHFSGKVPILGVCLGHQVIGYAFGGKIVHAK-RILHGKTSKIVHNGKG 160          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_PSEPU (Anthranilate synthase component II OS=Pseudomonas putida GN=trpG PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 55/113 (48.67%), Postives = 85/113 (75.22%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            +++IDNYDSFTYN+ QY+GELG   +V RNDE+T+ +++  NP  +++SPGP TP ++G+S++ +L     +P+ GVC+G Q IG+AFGG +VR+   VMHGK+S V++ + G
Sbjct:    3 LMMIDNYDSFTYNVVQYLGELGAEVKVIRNDEMTIAQIEALNPERIVVSPGPCTPSEAGVSIEAILHFAGKLPILGVCLGHQSIGQAFGGDVVRA-RQVMHGKTSPVHHRDLG 114          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_CYAPA (Anthranilate synthase component II OS=Cyanophora paradoxa GN=trpG PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 58/113 (51.33%), Postives = 83/113 (73.45%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            I++IDNYDSFTYNL QY+ EL     V RND++T++E+K  N +G++ISP P  P+DSGIS   +  LG  +P+ GVC+G Q IG  FGGKI+++P  ++HGK S++++D KG
Sbjct:    2 ILLIDNYDSFTYNLAQYLSELNIKVLVKRNDKITLDEIKNLNIQGIIISPCPGGPEDSGISQGIIKYLGNQIPILGVCLGHQTIGHVFGGKIIKAP-KLIHGKPSIIFHDGKG 113          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_THET8 (Anthranilate synthase component II OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=trpG PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27
Identity = 58/113 (51.33%), Postives = 81/113 (71.68%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            ++V+DNYDSFTYNL QY+GELG    V+RND   +EE++  +P  +LISPGP TP ++G+S+  V    P  P+ GVC+G Q IG AFGGK+V +P+ +MHGK S +++D  G
Sbjct:   14 VLVVDNYDSFTYNLVQYLGELGAEPIVWRNDRFRLEEVEALDPDRILISPGPCTPFEAGLSVPLVQRYAPRYPILGVCLGHQAIGAAFGGKVVPAPV-LMHGKVSPIHHDGTG 125          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_PORPU (Anthranilate synthase component II OS=Porphyra purpurea GN=trpG PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK 663
            I++IDNYDSFTYNL Q +GELG+   V RNDE+ V ++K+ NP  ++ISPGP  P +SGISL  +  L   +P+ GVC+G Q IG   GG I++ P  +MHGK+S +Y+D +
Sbjct:    2 ILIIDNYDSFTYNLAQCVGELGHDVLVCRNDEIDVVKIKKLNPEKIIISPGPGKPTESGISLDVISSLAEYIPILGVCLGHQSIGYINGGSIIKVP-KIMHGKTSQIYHDRE 112          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_PSEAE (Anthranilate synthase component II OS=Pseudomonas aeruginosa GN=trpG PE=4 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 59/122 (48.36%), Postives = 87/122 (71.31%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLS 693
            +++IDNYDSFTYNL QY GEL    +V RNDEL+VE+++   P  +++SPGP TP ++G+SL  +      +PL GVC+G Q IG+AFGG++VR+   VMHGK+S +++ +    G+ AGL+
Sbjct:    2 LLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAGVSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRA-RQVMHGKTSPIHHKDL---GVFAGLA 119          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_PORYE (Anthranilate synthase component II OS=Porphyra yezoensis GN=trpG PE=4 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.407e-27
Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK 663
            I++IDNYDSFTYNL Q +GELGY   V RNDE+ +  +K+ NP  ++ISPGP  P DSGISL  +     ++P+ GVC+G Q IG   GG+I++    +MHGK+S +Y++ +
Sbjct:    2 ILIIDNYDSFTYNLAQCVGELGYDVLVCRNDEIDIPTIKQLNPNKIIISPGPGKPSDSGISLDVISSFSDSIPILGVCLGHQSIGYLNGGRIIKVS-EIMHGKTSKIYHNNE 112          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_ACIAD (Anthranilate synthase component 2 OS=Acinetobacter sp. (strain ADP1) GN=trpG PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26
Identity = 53/113 (46.90%), Postives = 82/113 (72.57%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            +++IDNYDSFTYN+ QY GEL    +V RND++T+E+++R  P+ +++ PGP +P ++GIS+  +      +PL GVC+G Q IG+AFGG I+R+   VMHG+ S +Y+ +KG
Sbjct:    2 LLMIDNYDSFTYNIVQYFGELNQDVKVVRNDQVTLEDIERWQPKYLVVGPGPCSPTEAGISIPAIHHFAGRIPLLGVCLGHQAIGQAFGGNIIRAKT-VMHGRLSDMYHTDKG 113          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: PABA_BACSU (Para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II OS=Bacillus subtilis GN=pabA PE=4 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.098e-26
Identity = 55/112 (49.11%), Postives = 81/112 (72.32%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK 663
            I++IDNYDSFTYNL QY+GELG    V RND +T++E++  +P  ++ISPGP +P ++GISL+ +      +P+FGVC+G Q I + FGG +VR+   +MHGK+S + +D K
Sbjct:    2 ILMIDNYDSFTYNLVQYLGELGEELVVKRNDSITIDEIEELSPDFLMISPGPCSPDEAGISLEAIKHFAGKIPIFGVCLGHQSIAQVFGGDVVRAE-RLMHGKTSDIEHDGK 112          
BLAST of FC923825 vs. ExPASy Swiss-Prot
Match: TRPG_AZOBR (Anthranilate synthase component 2 OS=Azospirillum brasilense GN=trpG PE=4 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.025e-25
Identity = 56/114 (49.12%), Postives = 75/114 (65.79%), Query Frame = 1
Query:  328 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPDTPQDSGISLQTV-LELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 666
            +++IDNYDSFTYNL  Y+GELG   +V RND LTVEE     P G+++SPGP  P  +GI L  +       VPL GVC+G Q IG+ FGG +VR+P+  MHGK   +++  +G
Sbjct:    2 LLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAGICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPV-PMHGKVDRMFHQGRG 114          
The following BLAST results are available for this feature:
BLAST of FC923825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
TRPG_THEMA1.173e-2852.17Anthranilate synthase component II OS=Thermotoga m... [more]
TRPG_PSEPU2.001e-2848.67Anthranilate synthase component II OS=Pseudomonas ... [more]
TRPG_CYAPA2.001e-2851.33Anthranilate synthase component II OS=Cyanophora p... [more]
TRPG_THET81.694e-2751.33Anthranilate synthase component II OS=Thermus ther... [more]
TRPG_PORPU2.212e-2750.89Anthranilate synthase component II OS=Porphyra pur... [more]
TRPG_PSEAE4.929e-2748.36Anthranilate synthase component II OS=Pseudomonas ... [more]
TRPG_PORYE8.407e-2749.11Anthranilate synthase component II OS=Porphyra yez... [more]
TRPG_ACIAD1.098e-2646.90Anthranilate synthase component 2 OS=Acinetobacter... [more]
PABA_BACSU1.098e-2649.11Para-aminobenzoate/anthranilate synthase glutamine... [more]
TRPG_AZOBR6.025e-2549.12Anthranilate synthase component 2 OS=Azospirillum ... [more]

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Properties
Property NameValue
Genbank descriptionC31709C11EF StrClemenN Citrus clementina cDNA clone C31709C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923825 ID=FC923825; Name=FC923825; organism=Citrus clementina; type=EST; length=700bp
GACAGTTGCTCAGTTTTTTGTTGTCTTTGAAGTTAAAAAGCGCCTTAGTT
TCATATTCTCAGTCTCGTTCTCTCCTCTCTAGCAACAATGGCGGCAATGG
TTTCGCAGTCAACTCTCATTCAAACAAAACCGTCTCTCTCTTTAAAACCC
TCTCAACGGTTTCGACCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCC
AGGGCTGAGGTTGGGGGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAA
TGGCTGTGGCAGAGGCAGTACCCATTTCGAAGTCTTTATATTTGGATGAT
AAGAAGAGCAAGAATAATAAAAATCCCATCATTGTTATTGATAATTATGA
TAGTTTCACTTACAATCTCTGCCAGTATATGGGCGAGCTTGGTTATCACT
TTGAGGTTTATCGGAATGATGAATTAACTGTGGAGGAGTTAAAACGGAAA
AATCCTAGAGGAGTGCTTATATCCCCTGGGCCGGACACACCTCAAGATTC
TGGAATATCATTGCAGACTGTTTTGGAACTTGGACCTACTGTGCCTCTGT
TTGGTGTTTGTATGGGTTTGCAGTGCATTGGAGAGGCTTTTGGAGGGAAG
ATTGTGCGTTCTCCGCTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTA
TTATGATGAGAAAGGGGAGGATGGCTTGCTTGCTGGACTATCAATCCTTT
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