FC923844

Overview
NameFC923844
Unique NameFC923844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length756
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC2_DANRE (Cation transport regulator-like protein 2 OS=Danio rerio GN=chac2 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29
Identity = 70/165 (42.42%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAMFDIGHED 706
            WVFGYGSL+W   F Y++K +GF+K + R F     DHRG P  P R  TL +  E   WGVAY +  G E+E    EYL+ RE        V F+ + E  QP +   +++  + D   N  YLGPAPLE +A+QI  +VGP G N DYLF++ +A+  +  ED
Sbjct:    2 WVFGYGSLIWKVDFPYEDKRVGFVKGFSRRFWQGSTDHRGVPGKPGRVVTLIEDPEGCVWGVAYKLPSGQEQE--VKEYLDYREKGGYGVITVTFHPKDEQQQP-MQDTLLYIGSCD---NPNYLGPAPLETIAQQIVKSVGPSGKNTDYLFELADALRQLVPED 160          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC2_CHICK (Cation transport regulator-like protein 2 OS=Gallus gallus GN=chac2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28
Identity = 73/165 (44.24%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAMFDIGHED 706
            WVFGYGSL+W   F Y EK++G I+ Y R F     DHRG P  P R  TL +  E   WGVAY +  G E E  A  YL+ RE      T V FY +    +P    V+++  T D   N  YLGPAPL+E+A QI  AVGP G N +YLF++  +M ++  ED
Sbjct:    2 WVFGYGSLIWKVDFPYQEKMVGRIRGYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPAGQECEVKA--YLDFREKGGYRTTTVVFYPKDSSIKP--FDVLLYIGTRD---NPNYLGPAPLQEIAEQIIDAVGPSGRNTEYLFELANSMRNLVPED 159          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC2_XENLA (Cation transport regulator-like protein 2 OS=Xenopus laevis GN=chac2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.645e-28
Identity = 72/165 (43.64%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAMFDIGHED 706
            WVFGYGSL+W   F Y EK++G+I  Y R F     DHRG P  P R  TL +  E   WGVAY +  G E+E  A  YL+ RE      + V FY +    QP    V+++  T D   N  YLGPAPLE++A QI  AVGP G N +YLF++  ++ ++  ED
Sbjct:    2 WVFGYGSLIWKVDFPYVEKLVGYIMCYSRRFWQGSTDHRGVPGKPGRVVTLVEDPEGCVWGVAYRLPEGKEEEVKA--YLDFREKGGYRTSTVVFYPKDPSIQP--FNVLLYIGTCD---NPNYLGPAPLEDIAEQILNAVGPSGRNTEYLFELANSLRNLVPED 159          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC2_RAT (Cation transport regulator-like protein 2 OS=Rattus norvegicus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27
Identity = 68/165 (41.21%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAMFDIGHED 706
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF++ +++  +  ED
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSIRKLVPED 159          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC2_MOUSE (Cation transport regulator-like protein 2 OS=Mus musculus GN=Chac2 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27
Identity = 68/165 (41.21%), Postives = 93/165 (56.36%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAMFDIGHED 706
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E     YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF++ +++  +  ED
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPGGSVWGVAYKLPVGKEEE--VKTYLDFREKGGYRTTTVIFYPKDSTTKP--FSVLLYIGTCD---NPNYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELADSVRKLVPED 159          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC2_HUMAN (Cation transport regulator-like protein 2 OS=Homo sapiens GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26
Identity = 71/179 (39.66%), Postives = 100/179 (55.87%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAMFD-IGHEDELHIELANEVRKE 745
            WVFGYGSL+W   F Y +K++G+I +Y R F     DHRG P  P R  TL +      WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF++  ++ + +  E + H+    ++ KE
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYITNYSRRFWQGSTDHRGVPGKPGRVVTLVEDPAGCVWGVAYRLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDPTTKP--FSVLLYIGTCD---NPDYLGPAPLEDIAEQIFNAAGPSGRNTEYLFELANSIRNLVPEEADEHLFALEKLVKE 173          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC1_MOUSE (Cation transport regulator-like protein 1 OS=Mus musculus GN=Chac1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24
Identity = 67/161 (41.61%), Postives = 89/161 (55.28%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAM 685
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY VRG  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL ++ + M
Sbjct:   35 WIFGYGSLVWKPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVRG--EQVNEALKYLNVREAVLGGYDTKE-VTFYPQDTPDQPLT--ALAYVATP---QNPGYLGPAPEEVIATQILACRGFSGHNLEYLLRLADFM 187          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC1_HUMAN (Cation transport regulator-like protein 1 OS=Homo sapiens GN=CHAC1 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.440e-24
Identity = 66/161 (40.99%), Postives = 89/161 (55.28%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERREC---EYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAM 685
            W+FGYGSLVW P F Y +  +GF++ Y R F      HRG+ + P R  TL +  E   WGVAY V+G  E+   A++YL  RE     YD+K  V FY +  P QP     + + +TP    N  YLGPAP E +A QI    G  G+N +YL ++ + M
Sbjct:   34 WIFGYGSLVWRPDFAYSDSRVGFVRGYSRRFWQGDTFHRGSDKMPGRVVTLLEDHEGCTWGVAYQVQG--EQVSKALKYLNVREAVLGGYDTKE-VTFYPQDAPDQP--LKALAYVATP---QNPGYLGPAPEEAIATQILACRGFSGHNLEYLLRLADFM 186          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC1_DANRE (Cation transport regulator-like protein 1 OS=Danio rerio GN=chac1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.440e-24
Identity = 66/164 (40.24%), Postives = 87/164 (53.05%), Query Frame = 2
Query:  200 KMVFWVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDS--KTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAM 685
            K   W+FGYGSLVW P FKY    +G+IK Y+R F      HRG  + P R  TL +  +   WGVA+ V G   +E  +++YL  RE          VDF+  G    P     +V+ +TPD   N  YLGPA  EE+A QIA   G  G+N +YL ++ E M
Sbjct:   10 KSSLWIFGYGSLVWKPDFKYKRSKVGYIKGYKRRFWHGDNFHRGDDEMPGRVVTLIEEDDVCTWGVAFEVTGSQMEE--SLKYLNVREAVRGGYLTRAVDFFPRGTNQPP--VQALVYIATPD---NPIYLGPASTEEIASQIAVCKGNSGHNIEYLLRLAEFM 166          
BLAST of FC923844 vs. ExPASy Swiss-Prot
Match: CHAC2_BOVIN (Cation transport regulator-like protein 2 OS=Bos taurus GN=CHAC2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.878e-23
Identity = 66/165 (40.00%), Postives = 88/165 (53.33%), Query Frame = 2
Query:  212 WVFGYGSLVWNPGFKYDEKILGFIKDYRRVFDLACIDHRGTPQHPARTCTLEKSQETICWGVAYCVRGGPEKERLAMEYLERRECEYDSKTLVDFYREGEPSQPALTGVIVFTSTPDKVSNEYYLGPAPLEEMARQIATAVGPCGNNRDYLFKVGEAMFDIGHED 706
            WVFGYGSL+W   F Y +K++G+I  Y R F     DHRG P   +             WGVAY +  G E+E  A  YL+ RE      T V FY +   ++P    V+++  T D   N  YLGPAPLE++A QI  A GP G N +YLF++  +M  +  ED
Sbjct:    2 WVFGYGSLIWKVDFPYQDKLVGYISGYSRRFWQGSTDHRGVPGKGS------------VWGVAYKLPVGKEEEVKA--YLDFREKGGYRTTTVIFYPKDSTTEP--FSVLLYIGTRD---NPNYLGPAPLEDIAEQIFNAAGPSGKNTEYLFELANSMRSLVPED 147          
The following BLAST results are available for this feature:
BLAST of FC923844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
CHAC2_DANRE4.584e-2942.42Cation transport regulator-like protein 2 OS=Danio... [more]
CHAC2_CHICK5.068e-2844.24Cation transport regulator-like protein 2 OS=Gallu... [more]
CHAC2_XENLA8.645e-2843.64Cation transport regulator-like protein 2 OS=Xenop... [more]
CHAC2_RAT7.318e-2741.21Cation transport regulator-like protein 2 OS=Rattu... [more]
CHAC2_MOUSE7.318e-2741.21Cation transport regulator-like protein 2 OS=Mus m... [more]
CHAC2_HUMAN1.248e-2639.66Cation transport regulator-like protein 2 OS=Homo ... [more]
CHAC1_MOUSE1.526e-2441.61Cation transport regulator-like protein 1 OS=Mus m... [more]
CHAC1_HUMAN4.440e-2440.99Cation transport regulator-like protein 1 OS=Homo ... [more]
CHAC1_DANRE4.440e-2440.24Cation transport regulator-like protein 1 OS=Danio... [more]
CHAC2_BOVIN2.878e-2340.00Cation transport regulator-like protein 2 OS=Bos t... [more]

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Properties
Property NameValue
Genbank descriptionC31709E06EF StrClemenN Citrus clementina cDNA clone C31709E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923844 ID=FC923844; Name=FC923844; organism=Citrus clementina; type=EST; length=756bp
GGTGTTTATATAACTCGCAACCTCCATCCCTCTCTTTGCTCGTGACTCAA
TTGCACCCACACGAGAGACGGGGAGAGAGAGAGAGAGGAAGCGAAGAGAA
ATAGAAAGAGAGAATACAGAATCCTAACCTTAGGCGTTTTAGCTTGTTTC
GTTTCTCTCTTTTGCTTCAAGTTTCTTCCTTTCTCTTGCGATTTCCTTGA
AAATGGTGTTCTGGGTTTTTGGGTATGGATCATTGGTGTGGAACCCAGGG
TTTAAATATGATGAGAAAATTTTAGGCTTCATCAAGGACTACAGGCGCGT
GTTTGATCTTGCATGCATTGATCACAGGGGTACACCTCAACACCCGGCTA
GAACTTGCACGCTGGAAAAATCTCAAGAAACCATTTGTTGGGGTGTTGCT
TATTGTGTCCGAGGAGGTCCTGAAAAGGAAAGACTCGCTATGGAGTATTT
GGAACGAAGAGAATGCGAGTACGACTCTAAGACCCTTGTAGACTTTTACA
GGGAAGGGGAGCCTTCACAGCCGGCTCTAACTGGGGTTATAGTTTTCACG
TCTACTCCAGACAAAGTATCAAACGAGTATTATCTGGGGCCTGCTCCATT
GGAGGAAATGGCTAGGCAAATTGCAACGGCTGTCGGACCCTGTGGAAACA
ATAGAGACTACCTTTTCAAAGTTGGAGAGGCCATGTTTGATATTGGTCAT
GAGGACGAACTACATATAGAGCTGGCAAATGAAGTGAGGAAAGAGCTTGG
AACTGC
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