FC923891

Overview
NameFC923891
Unique NameFC923891
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 3.370e-93
Identity = 163/201 (81.09%), Postives = 182/201 (90.55%), Query Frame = 1
Query:  127 EEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEL-TCTEP*HVAY 726
            E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPE+     P HV +
Sbjct:   26 EAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPH 226          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.057e-62
Identity = 117/197 (59.39%), Postives = 150/197 (76.14%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPELTCT-EP*HVAY 726
            L MN+YK++CP+AE+IIR+QV+ LY +H NTA SWLRN+FHDC V+SCDASLLL++ R   SE++  RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +  T +P +  Y
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALY 226          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.008e-37
Identity = 72/179 (40.22%), Postives = 115/179 (64.25%), Query Frame = 1
Query:  151 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 687
            ++Y+++CP AE II + ++ +Y    + A   +R +FHDC ++ CDAS+LLD+     SEK+   +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+HS+G THC    +RLY
Sbjct:   71 DYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLY 249          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.629e-34
Identity = 75/185 (40.54%), Postives = 100/185 (54.05%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE 693
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+         R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H++G++ C     R+Y E
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNE 214          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.629e-34
Identity = 65/193 (33.68%), Postives = 111/193 (57.51%), Query Frame = 1
Query:  130 EDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPELTCT 705
            +D  L +++YK TCP   D+I+++++ + K     A   +R  FHDC VQ CD S+LLD T     EK+   +   ++ ++ ++ IK  +E ECPGVVSCAD+L +  RD  + +GGPY  +  GR+D + +  E+    LP   + +  ++ +F + G+    +VAL+G+H++G+  C     R+Y +   T
Sbjct:   26 KDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVT 218          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.347e-33
Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 1
Query:  139 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 687
            GL + FY   CP+AE I+++ V    K  +  A   LR  FHDC V+ C+ S+LL+   K   EK    +  +R F  I+N+K A+E+ECPG+VSC+D+L L  RD +VAL GP   ++TGRRDG  +        LP   +++S ++ +F + G+D   LV L G H++G  HC ++ +RLY
Sbjct:   31 GLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKK-DEKNSIPNLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLY 212          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.000e-33
Identity = 69/187 (36.90%), Postives = 108/187 (57.75%), Query Frame = 1
Query:  154 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPELTCTEP 711
            FY +TCP+AE I+R ++K    +   +  S +R  FHDC V  CDASLLLD T   L EK  +     +R+F  +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY +    +P
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKP 213          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 6.684e-33
Identity = 74/183 (40.44%), Postives = 100/183 (54.64%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD-RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 687
            L   +Y  +CPQ  +I+R  V     R    A S LR  FHDC VQ CD SLLLDS+ +  +EK  +  S   R F  ++ IK  +E++CPG VSCAD+L L+ RD  V  GGP   +  GRRD R +        +P  N++   +L +F   G+D   LVAL GSH++G + C     RLY
Sbjct:   30 LFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLY 212          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32
Identity = 73/182 (40.11%), Postives = 109/182 (59.89%), Query Frame = 1
Query:  142 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 687
            L MNFY ++CP AE I+++ V        + A + +R  FHDC V+ CD S+L++ST    +E++   +  +R F +I+ IK  +E +CPG+VSCADI+ L+ RD VV  GGP   + TGRRDGR S A      +P    +++ +   FA  G+D   LV L G+H++G +HC    +RLY
Sbjct:   26 LQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRGFGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLY 206          
BLAST of FC923891 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.140e-32
Identity = 79/184 (42.93%), Postives = 110/184 (59.78%), Query Frame = 1
Query:  142 LVMNFYK--DTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 687
            L  ++YK  +TC  AE+ +R QV++ YK  K+ A   LR ++ DC V  CDAS+LL+      SEK   ++ G+  F  I+ IK  +E+ CPGVVSCADIL L+ RD V   G P  P+ TGRRDG  S  + ++  LP  + S    +  F + G++   +  LLGSHS+GRTHC  +V RLY
Sbjct:   35 LTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGPN---SEKMAPQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLY 213          
The following BLAST results are available for this feature:
BLAST of FC923891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER42_ARATH3.370e-9381.09Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.057e-6259.39Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER48_ARATH2.008e-3740.22Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER52_ARATH4.629e-3440.54Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER11_ARATH4.629e-3433.68Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER56_ARATH1.347e-3339.89Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER17_ARATH3.000e-3336.90Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER49_ARATH6.684e-3340.44Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER3_ARATH1.140e-3240.11Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER26_ARATH1.140e-3242.93Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31710A09EF StrClemenN Citrus clementina cDNA clone C31710A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923891 ID=FC923891; Name=FC923891; organism=Citrus clementina; type=EST; length=745bp
GAAACAAGGTTGGTCACCTTCAGTGAGTGAAGAGTAGAAGAGAAAATGGG
TACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGT
CTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATG
AATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACA
AGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTA
GAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTT
CTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTT
TGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAA
GAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGT
AGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGG
AAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCC
CAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATT
GGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGG
CAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAGTTGACCT
GCACTGAACCCTGACATGTCGCATATGCTCATAGTGTCTGATGCA
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