FC923894

Overview
NameFC923894
Unique NameFC923894
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AK1_ARATH (Aspartokinase 1, chloroplastic OS=Arabidopsis thaliana GN=AK1 PE=1 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 1.760e-96
Identity = 178/229 (77.73%), Postives = 200/229 (87.34%), Query Frame = 1
Query:    1 EEKSENLGVDESEKQLTCVMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATPL 687
            EEK      +  EK +TCVMKFGGSS+ASAERM+EVA+LIL+FP E PVIVLSAMGKTTN LLLAGEKAVSCGV+N S I+ELS +K+LH RTV EL ID S+I T+LEELEQLLKGIAM+KELT R+RDYLVSFGEC+STRIFAAYLN IGVKARQYDAF+IGFITTDDFTN DILEATYPAVAKRL+ DW+ D A+PIVTGFLGK W+T A+TTLGRGGSDLTAT +
Sbjct:   71 EEKKTEAITEVDEKGITCVMKFGGSSVASAERMKEVADLILTFPEESPVIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTI 299          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AK3_ARATH (Aspartokinase 3, chloroplastic OS=Arabidopsis thaliana GN=AK3 PE=1 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 3.002e-96
Identity = 170/226 (75.22%), Postives = 203/226 (89.82%), Query Frame = 1
Query:   10 SENLGVDESEKQLTCVMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATPL 687
            SE   ++++EK+LTCVMKFGGSS+ASAERM +VA+LILSFP+E+PV+VLSAM KTTNKLL+AGEKAV CGVTN+  I+ELS++K+LH RT  ELG++ ++IA HLE LEQLLKG+AM+KELT RSRDYLVSFGECMSTR+FAAYLNKIG KARQYDAF+IG ITTDDFTNADILEATYPAV+K+L GDW  + A+P+VTGFLGK WR+CA+TTLGRGGSDLTAT +
Sbjct:   71 SETFKLNKTEKKLTCVMKFGGSSVASAERMIQVAKLILSFPDEKPVVVLSAMAKTTNKLLMAGEKAVCCGVTNVDTIEELSYIKELHIRTAHELGVETAVIAEHLEGLEQLLKGVAMMKELTLRSRDYLVSFGECMSTRLFAAYLNKIGHKARQYDAFEIGIITTDDFTNADILEATYPAVSKKLLGDWSKENALPVVTGFLGKGWRSCAVTTLGRGGSDLTATTI 296          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AK2_ARATH (Aspartokinase 2, chloroplastic OS=Arabidopsis thaliana GN=AK2 PE=1 SV=2)

HSP 1 Score: 344.354 bits (882), Expect = 3.669e-94
Identity = 168/216 (77.78%), Postives = 194/216 (89.81%), Query Frame = 1
Query:   40 KQLTCVMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATPL 687
            K+LTCVMKFGGSS+ SAERM+EVA LILSFP+ERPVIVLSAMGKTTNKLL AGEKAV+CGVTN+  I+ELSF+K+LH RT  ELG++ ++I  HLE L QLLKGI+M+KELT R+RDYLVSFGECMSTR+F+AYLNKIG KARQYDAF+IGFITTDDFTNADILEATYPAV+K L GDW  + A+P+VTG+LGK WR+CAITTLGRGGSDLTAT +
Sbjct:   80 KELTCVMKFGGSSVESAERMKEVANLILSFPDERPVIVLSAMGKTTNKLLKAGEKAVTCGVTNVESIEELSFIKELHLRTAHELGVETTVIEKHLEGLHQLLKGISMMKELTLRTRDYLVSFGECMSTRLFSAYLNKIGHKARQYDAFEIGFITTDDFTNADILEATYPAVSKTLVGDWSKENAVPVVTGYLGKGWRSCAITTLGRGGSDLTATTI 295          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AK_METJA (Probable aspartokinase OS=Methanocaldococcus jannaschii GN=MJ0571 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28
Identity = 82/221 (37.10%), Postives = 134/221 (60.63%), Query Frame = 1
Query:   46 LTCVMKFGGSSLASAERMREVAELILSFPNERP--VIVLSAMGKTTNKLLLAGEKAVSCGVTNISCI-DELSFVKDLHHRTVDELGID-------RSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTA 678
            +T VMKFGG+S+ S ER+R VA+++     E    V+V+SAM + TN L+   ++A+   V +I+ + D + F+++ H++ ++E           + II + +EELE++L G+A L ELTP+SRDY++SFGE +S+ I +  +  +G K+   +  + G IT ++F +A +       V +RL    + +  IP+VTGF+G       ITTLGRGGSD +A
Sbjct:    1 MTTVMKFGGTSVGSGERIRHVAKIVTKRKKEDDDVVVVVSAMSEVTNALVEISQQALD--VRDIAKVGDFIKFIREKHYKAIEEAIKSEEIKEEVKKIIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRL---EVKERLL-PLLKEGIIPVVTGFIGTT-EEGYITTLGRGGSDYSA 214          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AKH1_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.093e-13
Identity = 63/222 (28.38%), Postives = 110/222 (49.55%), Query Frame = 1
Query:   55 VMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTV------DELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWIT--DLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATPLESI 696
            V KFGG+ + ++ER+++VA +++   +ER ++V+SAM K T+ +     +A S    + S +  LS V + H  T       DEL    + +   +  L+ +L+ I +    T    D++V  GE  S ++ AA + K G+     DA D+  +     T+++ ++  +    KRL   W T     I I TGF+    +    TTL R GSD +A  + ++
Sbjct:   86 VHKFGGTCVGNSERIKDVAAVVVKDDSERKLVVVSAMSKVTDMMYDLIHRAES---RDDSYLSALSGVLEKHRATAVDLLDGDELSSFLARLNDDINNLKAMLRAIYIAGHATESFSDFVVGHGELWSAQMLAAVVRKSGLDCTWMDARDVLVVIP---TSSNQVDPDFVESEKRLE-KWFTQNSAKIIIATGFIASTPQNIP-TTLKRDGSDFSAAIMSAL 299          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AK3_ECOLI (Lysine-sensitive aspartokinase 3 OS=Escherichia coli (strain K12) GN=lysC PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.427e-13
Identity = 72/218 (33.03%), Postives = 106/218 (48.62%), Query Frame = 1
Query:   55 VMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKEL-----TPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDL--AIPIVTGFLGKAWRTCAITTLGRGGSDLTATPL 687
            V KFGG+S+A  + M   A+++LS  N R ++VLSA    TN L+   E     G+      ++L  ++++    ++ L     I     EE+E+LL+ I +L E      +P   D LVS GE MST +F   L +  V+A+ +D   +   T D F  A   E    A+A+      +  L   + I  GF+G        TTLGRGGSD TA  L
Sbjct:    6 VSKFGGTSVADFDAMNRSADIVLSDANVR-LVVLSASAGITNLLVALAE-----GLEPGERFEKLDAIRNIQFAILERLRYPNVI----REEIERLLENITVLAEAAALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKV-MRTNDRFGRA---EPDIAALAELAALQLLPRLNEGLVITQGFIGSE-NKGRTTTLGRGGSDYTAALL 208          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AKH1_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13
Identity = 63/222 (28.38%), Postives = 106/222 (47.75%), Query Frame = 1
Query:   55 VMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDEL----GIDRSIIATH--LEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIP--IVTGFLGKAWRTCAITTLGRGGSDLTATPLESI 696
            V KFGG+ + ++ER+  VA+++L  P+ER ++V+SAM K T+ +     KA S   + I+ +DE   V D H  T  +L     + R +   H  +  L+ +L+ I +    T    D++V  GE  S ++ +  + K G      D  ++  +     + A+ ++  Y    KRL   W +       I TGF+         TTL R GSD +A  + S+
Sbjct:   96 VHKFGGTCMGTSERIHNVADIVLRDPSERKLVVVSAMSKVTDMMYNLVNKAQSRDDSYIAVLDE---VFDKHMTTAKDLLAGEDLARFLSQLHADISNLKAMLRAIYIAGHATESFSDFVVGHGELWSAQMLSYAIQKSGTPCSWMDTREVLVVNP---SGANQVDPDYLESEKRLE-KWFSRCPAETIIATGFIASTPENIP-TTLKRDGSDFSAAIIGSL 309          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AKH2_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 61/220 (27.73%), Postives = 110/220 (50.00%), Query Frame = 1
Query:   43 QLTCVMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDEL--GIDRSIIATHL----EELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDW--ITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTA 678
            ++  V KFGG+ + +++R+R VAE+I++  +ER ++V+SAM K T+ +     KA S    + S +  L  V + H  T  +L  G D +   +HL      L+ +L+ I +    +    D++   GE  S ++ +  + K G++ +  D  D+  +     T+++ ++  +    KRL   W  +    I I TGF+    +    TTL R GSD +A
Sbjct:   87 EMWSVHKFGGTCVGNSQRIRNVAEVIINDNSERKLVVVSAMSKVTDMMYDLIRKAQS---RDDSYLSALEAVLEKHRLTARDLLDGDDLASFLSHLHNDISNLKAMLRAIYIAGHASESFSDFVAGHGELWSAQMLSYVVRKTGLECKWMDTRDVLIVNP---TSSNQVDPDFGESEKRL-DKWFSLNPSKIIIATGFIASTPQNIP-TTLKRDGSDFSA 298          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AK3_BACSU (Probable aspartokinase OS=Bacillus subtilis GN=yclM PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11
Identity = 64/218 (29.36%), Postives = 105/218 (48.17%), Query Frame = 1
Query:   55 VMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMG-------KTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDELGIDRSIIATHLEELEQLLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIVTGFLGKAWRTCAITTLGRGGSDLTATPL 687
            V+KFGGSSLAS  ++ +V  ++ S P  R  +V+SA G       K T+ L+   E+ ++ G    S  +    V + +    +EL + +SII    ++L  LL+G    K    +  D + + GE  + ++ AAY    GVKA   +  D G   T++  NA +L  +Y  + +    D      + I  GF G + +   + T  R GSD+T + L
Sbjct:    3 VVKFGGSSLASGAQLDKVFHIVTSDP-ARKAVVVSAPGKHYAEDTKVTDLLIACAEQYLATG----SAPELAEAVVERYALIANELQLGQSIIEKIRDDLFTLLEGD---KSNPEQYLDAVKASGEDNNAKLIAAYFRYKGVKAEYVNPKDAGLFVTNEPGNAQVLPESYQNLYRLRERD-----GLIIFPGFFGFS-KDGDVITFSRSGSDITGSIL 206          
BLAST of FC923894 vs. ExPASy Swiss-Prot
Match: AKH_DAUCA (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.629e-11
Identity = 61/216 (28.24%), Postives = 103/216 (47.69%), Query Frame = 1
Query:   55 VMKFGGSSLASAERMREVAELILSFPNERPVIVLSAMGKTTNKLLLAGEKAVSCGVTNISCIDELSFVKDLHHRTVDELGIDRSIIATHLEELEQ-------LLKGIAMLKELTPRSRDYLVSFGECMSTRIFAAYLNKIGVKARQYDAFDIGFITTDDFTNADILEATYPAVAKRLHGDWITDLAIPIV-TGFLGKAWRTCAITTLGRGGSDLTA 678
            + KFGG+ + S+ER+R VAE+++   +ER ++V+SAM K T+ +     KA S   +  S +D    V + H  T  +L +D   +A  L  L+        +L+ I +    T    D++V  GE  S ++ +  + K G      D  D+  +       ++ ++  Y    KRL   + ++    IV TGF+    +    TTL R GSD +A
Sbjct:   94 IHKFGGTCVGSSERIRNVAEIVVEDDSERKLVVVSAMSKVTDMMYDLIYKAQSRDDSYESALDA---VMEKHKLTAFDL-LDEDDLARFLTRLQHDVITLKAMLRAIYIAGHATESFSDFVVGHGELWSAQLLSFVIRKNGGDCNWMDTRDVLVVNP---AGSNQVDPDYLESEKRLEKWFSSNQCQTIVATGFIASTPQNIP-TTLKRDGSDFSA 301          
The following BLAST results are available for this feature:
BLAST of FC923894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AK1_ARATH1.760e-9677.73Aspartokinase 1, chloroplastic OS=Arabidopsis thal... [more]
AK3_ARATH3.002e-9675.22Aspartokinase 3, chloroplastic OS=Arabidopsis thal... [more]
AK2_ARATH3.669e-9477.78Aspartokinase 2, chloroplastic OS=Arabidopsis thal... [more]
AK_METJA4.569e-2837.10Probable aspartokinase OS=Methanocaldococcus janna... [more]
AKH1_ARATH1.093e-1328.38Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AK3_ECOLI1.427e-1333.03Lysine-sensitive aspartokinase 3 OS=Escherichia co... [more]
AKH1_MAIZE5.423e-1328.38Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_ARATH1.578e-1227.73Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AK3_BACSU1.744e-1129.36Probable aspartokinase OS=Bacillus subtilis GN=ycl... [more]
AKH_DAUCA6.629e-1128.24Bifunctional aspartokinase/homoserine dehydrogenas... [more]
back to top
Properties
Property NameValue
Genbank descriptionC31710B01EF StrClemenN Citrus clementina cDNA clone C31710B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923894 ID=FC923894; Name=FC923894; organism=Citrus clementina; type=EST; length=709bp
GAGGAAAAGAGTGAGAATCTAGGTGTCGATGAGAGTGAGAAACAGTTGAC
GTGTGTAATGAAGTTTGGTGGATCGTCCTTGGCCTCTGCCGAGAGGATGA
GAGAGGTTGCTGAGCTTATACTTAGCTTCCCTAATGAGAGGCCCGTGATT
GTTCTCTCTGCGATGGGAAAGACAACAAATAAGCTTTTATTGGCCGGTGA
GAAGGCTGTCAGTTGTGGTGTCACTAATATATCATGTATTGATGAGTTGA
GCTTTGTAAAAGACTTGCATCACAGGACAGTGGATGAACTTGGCATAGAC
AGGTCCATTATAGCAACACACCTAGAAGAACTGGAGCAACTTCTGAAGGG
AATTGCTATGTTGAAAGAGTTAACTCCACGTTCTAGAGACTATTTAGTTT
CCTTTGGGGAGTGCATGTCCACAAGGATTTTTGCAGCATATCTGAACAAA
ATTGGTGTGAAAGCTCGCCAATACGATGCTTTTGATATTGGTTTTATAAC
CACAGATGACTTCACAAATGCTGATATTTTAGAAGCTACTTATCCAGCTG
TTGCTAAGAGGTTACATGGTGATTGGATCACTGATCTTGCAATTCCAATT
GTTACTGGTTTCCTTGGAAAGGCCTGGAGGACTTGTGCAATTACTACATT
GGGTAGGGGTGGCAGTGACCTGACGGCCACACCATTGGAAAGCATTAGGA
TTGCAGAGA
back to top