FC923905

Overview
NameFC923905
Unique NameFC923905
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length729
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: MNR1_CAPAN ((+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.860e-54
Identity = 80/155 (51.61%), Postives = 109/155 (70.32%), Query Frame = 1
Query:   25 MAE--AATKHAVVTGANKGIGYEIVRQLASNGVTTVLTARDEKRGLEAVEKLK-QSGF--DNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGISGVCMDGNDLSGVVKVNRSGTSGVILEGDN--FSGFVKDGT-PVKWYELTTQTHES 465
            MAE   +T++AVVTG NKGIGYE  RQLAS GV  VLT+RDEK+G+EA+E+LK +S F  ++++FHQLD+ DPA+I SL N I++ FG+LDIL+NNAGISGV ++G D+  + ++     S V  E +N    G+ K G   V  YELT +  E+
Sbjct:    1 MAEKTTSTRYAVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEESNFTDEHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEG-DVQVLKEILERYISIVFTEDENGEEGGWTKSGPGSVTNYELTKECIET 154          

HSP 2 Score: 98.9821 bits (245), Expect = 1.860e-54
Identity = 45/73 (61.64%), Postives = 60/73 (82.19%), Query Frame = 3
Query:  471 KCLQTNFYGTKRMCEALIPFLQLSDSPRIVNVSSSWGKLEYVTNEWAKGVLSDVENLTEERVDEVLREYLNDF 689
            +C++TN+YG KRM EA IP LQLS+SPRIVNV+SS GKL+ + N+WA  VL D ++LTEE+VD+V+ E+L DF
Sbjct:  150 ECIETNYYGAKRMTEAFIPLLQLSNSPRIVNVASSMGKLKLLCNKWAIEVLRDADSLTEEKVDQVVNEFLKDF 222          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: SALR_PAPBR (Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.801e-48
Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 1
Query:   49 AVVTGANKGIGYEIVRQLASNGVTTVLTARDEKRGLEAVEKLKQSGFDNVIFHQLDVADP-AAIHSLANFIRSHFGKLDILVNNAGISGVCMDGNDLSGVVKVNRSGTSGVILEGDNFSGFVKDGTPVKWYELTTQTHESTENAFK 483
            AVVTG NKGIG+EI +QL+S+G+  VLT RD  RGLEAVEKLK S  +NV+FHQLDV DP   + SLA+FI++ FGKLDILVNNAG++G  +D +    ++       S +   G++    VK     +  EL ++T+E  E   K
Sbjct:   15 AVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNSNHENVVFHQLDVTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMI-------SDI---GEDSEEVVKIYEKPEAQELMSETYELAEECLK 150          

HSP 2 Score: 87.8113 bits (216), Expect = 1.801e-48
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 3
Query:  471 KCLQTNFYGTKRMCEALIPFLQLSDSPRIVNVSSSWGKLEYVTNEWAKGVLSDVENLTEERVDEVLREYLNDF 689
            +CL+ N+YG K + E L+P LQLSDSPRIVNVSSS G L+YV+NE A  +L D + LTEER+D V+   L DF
Sbjct:  147 ECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDF 219          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: SDR1_ARATH ((+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.434e-32
Identity = 81/163 (49.69%), Postives = 101/163 (61.96%), Query Frame = 1
Query:   25 MAEAATKHAVVTGANKGIGYEIVRQLASNGVTTVLTARDEKRGLEAVEKLKQS---GFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGISGVCMDGNDLSGVVKVNRSGTSGVILEGDNFSGFVKDGTPVKWYELTTQTHESTENAFKQTSMVPK 504
            MAE   ++AVVTGAN+GIG+EI RQLAS G+  VLT+RDE RGLEAVE LK+       +++FHQLDVADPA+I SLA F+++ FGKLDILVNNAGI G+  D   L                     +G  K+G   KW E+ T+T+E TE   K     PK
Sbjct:    1 MAEETPRYAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQSLLFHQLDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALR--------------------AGAGKEG--FKWDEIITETYELTEECIKINYYGPK 141          

HSP 2 Score: 113.62 bits (283), Expect = 1.092e-24
Identity = 51/73 (69.86%), Postives = 63/73 (86.30%), Query Frame = 3
Query:  471 KCLQTNFYGTKRMCEALIPFLQLSDSPRIVNVSSSWGKLEYVTNEWAKGVLSDVENLTEERVDEVLREYLNDF 689
            +C++ N+YG KRMCEA IP L+LSDSPRIVNVSSS G+L+ V NEWAKG+LSD ENLTEER+D+V+ + LNDF
Sbjct:  131 ECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNEWAKGILSDAENLTEERIDQVINQLLNDF 203          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: SDR2_ARATH (Short-chain dehydrogenase/reductase 2 OS=Arabidopsis thaliana GN=SDR2 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.585e-31
Identity = 75/163 (46.01%), Postives = 102/163 (62.58%), Query Frame = 1
Query:   25 MAEAATKHAVVTGANKGIGYEIVRQLASNGVTTVLTARDEKRGLEAVEKLKQS---GFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGISGVCMDGNDLSGVVKVNRSGTSGVILEGDNFSGFVKDGTPVKWYELTTQTHESTENAFKQTSMVPK 504
            MAE + ++A+VTG N+GIG+EI RQLA+ G+  +LT+RDEK+GLEAVE LK+       +++FHQLDV+DP ++ SLA F+++HFGKLDIL+NNAG+ GV  D       V   R+GT              K+G   KW E  T+T+E  E   K     PK
Sbjct:    1 MAEESPRYAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQSIVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITD-------VDALRAGTG-------------KEG--FKWEETITETYELAEECIKINYYGPK 141          

HSP 2 Score: 105.531 bits (262), Expect = 2.973e-22
Identity = 46/72 (63.89%), Postives = 60/72 (83.33%), Query Frame = 3
Query:  471 KCLQTNFYGTKRMCEALIPFLQLSDSPRIVNVSSSWGKLEYVTNEWAKGVLSDVENLTEERVDEVLREYLND 686
            +C++ N+YG KRMCEA IP LQLSDSPRI+NVSS  G+++ + NEWAKG+LSD ENLTE R+D+V+ + LND
Sbjct:  131 ECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNEWAKGILSDAENLTEVRIDQVINQLLND 202          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: CBR1_BOVIN (Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.103e-16
Identity = 54/118 (45.76%), Postives = 70/118 (59.32%), Query Frame = 1
Query:   49 AVVTGANKGIGYEIVRQLASN-GVTTVLTARDEKRGLEAVEKLKQSGFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGISGVCMDGN----DLSGVVKVNRSGTSGVILE 387
            A+VTGANKGIG+ IVR L        VLTARDE RG  AV++L+  G  + +FHQLD+ D  +I +L +F+R  +G LD+LVNNAGI+    D           +K N  GT  V  E
Sbjct:    8 ALVTGANKGIGFVIVRDLCRRFSGDVVLTARDEARGRAAVQQLQAEGL-SPLFHQLDIDDRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADTTPFHIQAEVTMKTNFFGTRDVCTE 124          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: CBR1_RAT (Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus GN=Cbr1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.208e-16
Identity = 53/118 (44.92%), Postives = 72/118 (61.02%), Query Frame = 1
Query:   49 AVVTGANKGIGYEIVRQLASNGV-TTVLTARDEKRGLEAVEKLKQSGFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGISGVCMDGN----DLSGVVKVNRSGTSGVILE 387
            A+VTGANKGIG+ IVR L    +   VLTARDE RG EAV++L+  G  +  FHQLD+ +P +I +L +F+   +G L++LVNNAGI+   +D           +K N  GT  V  E
Sbjct:    8 ALVTGANKGIGFAIVRDLCRKFLGDVVLTARDESRGHEAVKQLQTEGL-SPRFHQLDIDNPQSIRALRDFLLQEYGGLNVLVNNAGIAFKVVDPTPFHIQAEVTMKTNFFGTQDVCKE 124          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: CBR1_MOUSE (Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.080e-15
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = 1
Query:   49 AVVTGANKGIGYEIVRQLASN-GVTTVLTARDEKRGLEAVEKLKQSGFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGIS 309
            A+VTGANKGIG+ I R L        VL ARDE+RG  AV+KL+  G  +  FHQLD+ +P +I +L +F+   +G LD+LVNNAGI+
Sbjct:    8 ALVTGANKGIGFAITRDLCRKFSGDVVLAARDEERGQTAVQKLQAEGL-SPRFHQLDIDNPQSIRALRDFLLKEYGGLDVLVNNAGIA 94          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: CBR1_PIG (Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.633e-15
Identity = 46/91 (50.55%), Postives = 61/91 (67.03%), Query Frame = 1
Query:   40 TKHAVVTGANKGIGYEIVRQLASN-GVTTVLTARDEKRGLEAVEKLKQSGFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGIS 309
            T+ A+VTGANKGIG+ IVR L        VLTARD  RG  AV++L+  G  +  FHQLD+ D  +I +L +F+R  +G LD+LVNNA I+
Sbjct:    5 TRVALVTGANKGIGFAIVRDLCRQFAGDVVLTARDVARGQAAVKQLQAEGL-SPRFHQLDIIDLQSIRALCDFLRKEYGGLDVLVNNAAIA 94          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: CBR1_PONAB (Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1
Query:   49 AVVTGANKGIGYEIVRQLASN-GVTTVLTARDEKRGLEAVEKLKQSGFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGISGVCMDGN----DLSGVVKVNRSGTSGVILE 387
            A+VTG NKGIG  IVR L        VLTARD  RG  AV++L+  G  +  FHQLD+ D  +I +L +F+R  +G LD+LVNNAGI+    D           +K N  GT  V  E
Sbjct:    8 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 124          
BLAST of FC923905 vs. ExPASy Swiss-Prot
Match: CBR1_HUMAN (Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 5.122e-14
Identity = 52/118 (44.07%), Postives = 66/118 (55.93%), Query Frame = 1
Query:   49 AVVTGANKGIGYEIVRQLASN-GVTTVLTARDEKRGLEAVEKLKQSGFDNVIFHQLDVADPAAIHSLANFIRSHFGKLDILVNNAGISGVCMDGN----DLSGVVKVNRSGTSGVILE 387
            A+VTG NKGIG  IVR L        VLTARD  RG  AV++L+  G  +  FHQLD+ D  +I +L +F+R  +G LD+LVNNAGI+    D           +K N  GT  V  E
Sbjct:    8 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTE 124          
The following BLAST results are available for this feature:
BLAST of FC923905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
MNR1_CAPAN1.860e-5451.61(+)-neomenthol dehydrogenase OS=Capsicum annuum GN... [more]
SALR_PAPBR1.801e-4848.63Salutaridine reductase OS=Papaver bracteatum GN=SA... [more]
SDR1_ARATH1.434e-3249.69(+)-neomenthol dehydrogenase OS=Arabidopsis thalia... [more]
SDR2_ARATH1.585e-3146.01Short-chain dehydrogenase/reductase 2 OS=Arabidops... [more]
CBR1_BOVIN1.103e-1645.76Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1... [more]
CBR1_RAT3.208e-1644.92Carbonyl reductase [NADPH] 1 OS=Rattus norvegicus ... [more]
CBR1_MOUSE2.080e-1551.14Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cb... [more]
CBR1_PIG4.633e-1550.55Carbonyl reductase [NADPH] 1 OS=Sus scrofa GN=CBR1... [more]
CBR1_PONAB5.122e-1444.07Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CB... [more]
CBR1_HUMAN5.122e-1444.07Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CB... [more]

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Properties
Property NameValue
Genbank descriptionC31710C05EF StrClemenN Citrus clementina cDNA clone C31710C05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923905 ID=FC923905; Name=FC923905; organism=Citrus clementina; type=EST; length=729bp
GGCACAACTTTATCATTCCATTCAATGGCAGAAGCAGCAACAAAGCATGC
AGTTGTTACAGGAGCAAATAAGGGAATTGGGTATGAAATAGTGAGGCAAT
TGGCTTCAAATGGGGTCACTACGGTACTAACAGCCAGAGATGAGAAGAGG
GGTCTTGAAGCTGTTGAAAAACTGAAACAGTCTGGCTTTGATAATGTGAT
CTTTCATCAGCTTGATGTTGCAGACCCTGCTGCTATTCACTCTCTAGCTA
ATTTCATTCGAAGTCATTTTGGAAAGCTTGATATTTTGGTGAACAATGCA
GGGATTAGTGGAGTCTGTATGGATGGTAATGATTTATCTGGTGTTGTCAA
GGTCAACCGTTCAGGGACTAGTGGAGTCATTTTGGAGGGTGACAATTTCT
CAGGTTTTGTCAAGGATGGTACGCCGGTCAAATGGTATGAATTGACAACT
CAAACTCATGAGTCAACTGAAAATGCCTTCAAACAAACTTCTATGGTACC
AAAAGAATGTGTGAAGCACTGATTCCCTTCCTCCAATTATCAGATTCACC
AAGAATTGTTAATGTTTCCTCTTCCTGGGGAAAGTTAGAGTATGTGACAA
ATGAATGGGCAAAAGGAGTGCTAAGCGATGTTGAGAACCTAACGGAAGAG
AGAGTGGATGAGGTGCTGAGGGAGTATTTGAATGATTTTAACTAGGTTCC
CCTTGAACCAANGCTGGGCCGTTCTATGT
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