FC923907

Overview
NameFC923907
Unique NameFC923907
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC923907 vs. ExPASy Swiss-Prot
Match: AKR2_ARATH (Ankyrin repeat domain-containing protein 2 OS=Arabidopsis thaliana GN=AKR2 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 6.429e-52
Identity = 97/155 (62.58%), Postives = 121/155 (78.06%), Query Frame = 2 
Query:  260 NPFDFSAMSGLLNDPSIKELAEQIAKDPAFNSMAEQLQKTLHGANAEESIPQFDTTQYYSTMQQVMQNPQFMTMAERLGNALMQDPSMSHMLESLTNPTKKDQIEERMAKIKEDPSLKPILDEIESGGPSAMMKYWK**DVLQKLGESMGLAVGG 724
            N FDFS M+ +LNDPSI+E+AEQIAKDPAFN +AEQLQ+++  A  E   P FD  QY +TMQQVM NP+F TMAE+LG AL+QDP MS  L++ +NP   +   ERMA++KEDP LKPILDEI++GGPSAMMKYW   +VL+KLGE+MG+ V G
Sbjct:   45 NAFDFSNMASILNDPSIREMAEQIAKDPAFNQLAEQLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAFSNPETAEHFTERMARMKEDPELKPILDEIDAGGPSAMMKYWNDPEVLKKLGEAMGMPVAG 199
The following BLAST results are available for this feature:
BLAST of FC923907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AKR2_ARATH6.429e-5262.58Ankyrin repeat domain-containing protein 2 OS=Arab... [more]
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Properties
Property NameValue
Genbank descriptionC31710C08EF StrClemenN Citrus clementina cDNA clone C31710C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923907 ID=FC923907; Name=FC923907; organism=Citrus clementina; type=EST; length=746bp
GGGTGGGGAGCAAGTGCATAGGTTTTATTCTTAATTTTAAAACCCAATCT
AATCTCAATCTCCTTCACAGTCTCTCCGATTCAGCAGCTGTTTAGTTCGC
ATGGCGTCTCCTCCCACCAAGGATGCTCCCGCTGATAAGAAAGCAGAAGG
ATCGACCCCTAAGTCAGAAGCAACTTCGGGGTCTGTTAGAGACTCATCTA
GTTCGCCTTCCGGTGCTTCTGCTGCAAGTGCTTTTCCAGGAGTTGGTGGC
GCTGCTCCAAATCCTTTTGATTTCTCCGCCATGAGTGGCCTTCTTAATGA
TCCGAGCATTAAGGAACTAGCTGAACAGATTGCGAAAGATCCAGCATTCA
ATTCCATGGCCGAGCAACTTCAGAAAACTTTGCATGGTGCAAATGCTGAG
GAGAGTATTCCACAGTTTGACACAACACAGTATTACTCCACCATGCAACA
GGTTATGCAGAATCCTCAGTTTATGACTATGGCTGAGCGCCTTGGTAATG
CTTTAATGCAGGACCCATCAATGTCTCATATGCTGGAGAGTTTGACAAAC
CCTACAAAAAAAGACCAGATCGAGGAAAGAATGGCAAAAATCAAGGAAGA
TCCCTCTTTGAAGCCTATTTTGGATGAGATAGAGTCTGGTGGACCATCTG
CTATGATGAAGTACTGGAAATGATAAGATGTTTTGCAGAAATTGGGTGAA
AGCATGGGTCTTGCAGTTGGTGGGGATGCGACACTTCTGCTGATAT
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