FC923910

Overview
NameFC923910
Unique NameFC923910
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length728
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC923910 vs. ExPASy Swiss-Prot
Match: ADPPT_RAT (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Rattus norvegicus GN=Aasdhppt PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.331e-30
Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 3
Query:  153 RWVVDISKWDPTPHDFSFALYLLPQHHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDK 695
            RW      W P+P ++  A+  +       I ++V   D K AL   L+   LV + L IP++ I + RT +GKP L  D     +PNFNFN+SH GDY  +A+EP   VG+DI+  + P R +IPEF       F++ EW+ I +       L  FYR+W LKE+++KAIG+G+ + + +
Sbjct:   18 RWAFSCGTWLPSPAEWLLAVRSIQPEEKERIGQFVFARDAKAALAGRLMIRKLVAEKLNIPWDHIRLQRTSKGKPILAKDTLN-PYPNFNFNISHQGDYTVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFNDEWSQLDMFYRHWALKESFIKAIGVGLGFEMQR 197          
BLAST of FC923910 vs. ExPASy Swiss-Prot
Match: ADPPT_MOUSE (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Mus musculus GN=Aasdhppt PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.059e-30
Identity = 67/181 (37.02%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  153 RWVVDISKWDPTPHDFSFALYLLPQHHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDK 695
            RW      W P+  ++  A+  +       I K+V   D K AL   L+   LV + L IP++ I + RT +GKP L  D     +PNFNFN+SH GDY  +A+EP   VG+DI+  + P R +IPEF       F+  EW+ I +       L  FYR+W LKE+++KAIG+G+ + + +
Sbjct:   18 RWAFSCGTWLPSRAEWLLAMRSIQPEEKERIGKFVFARDAKAALAGRLMIRKLVAEKLNIPWDHIRLQRTSKGKPVLAKDSLN-PYPNFNFNISHQGDYAVLAAEPEVQVGIDIMKTSFPGRGSIPEFFHIMKRKFTKKEWETIRSFNDEWTQLDMFYRHWALKESFIKAIGVGLGFEMQR 197          
BLAST of FC923910 vs. ExPASy Swiss-Prot
Match: ADPPT_HUMAN (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Homo sapiens GN=AASDHPPT PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 5.594e-29
Identity = 66/181 (36.46%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  153 RWVVDISKWDPTPHDFSFALYLLPQHHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDK 695
            RW      W P+  ++  A+  +       I ++V   D K A+   L+   LV + L IP+  I + RT +GKP L  D +   +PNFNFN+SH GDY  +A+EP   VG+DI+  + P R +IPEF       F++ EW+ I +       L  FYR W LKE+++KAIG+G+ + L +
Sbjct:   18 RWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSN-PYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQR 197          
BLAST of FC923910 vs. ExPASy Swiss-Prot
Match: ADPPT_PONAB (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Pongo abelii GN=AASDHPPT PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.305e-29
Identity = 66/181 (36.46%), Postives = 98/181 (54.14%), Query Frame = 3
Query:  153 RWVVDISKWDPTPHDFSFALYLLPQHHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDK 695
            RW      W P+  ++  A+  +       I ++V   D K A+   L+   LV + L IP+  I + RT +GKP L  D +   +PNFNFN+SH GDY  +A+EP   VG+DI+  + P R +IPEF       F++ EW+ I         L  FYR W LKE+++KAIG+G+ + L +
Sbjct:   18 RWAFSCGTWLPSRAEWLLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSN-PYPNFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRGFKDEWTQLDMFYRNWALKESFIKAIGVGLGFELQR 197          
BLAST of FC923910 vs. ExPASy Swiss-Prot
Match: ADPPT_XENLA (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Xenopus laevis GN=aasdhppt PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.989e-26
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 3
Query:  144 GVQRWVVDISKWDPTPHDFSFALYLLPQHHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIASEPLCLVGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVAYGLDK 695
            G  RW      W P+  ++      +       I  ++   D K A+   LL   ++   L IP++ I + RT +GKP+L    +  ++P FNFNVSH GDY  +A+EP   VG+DI+   +P   +I EF +  +  F+  EW++I +       L  FYR+W LKE+++KAIG+G+ + L +
Sbjct:   12 GSVRWAFQCGSWCPSQAEWLLCARCVQPEEKQRIGHFMFTRDAKAAMAGRLLMRKVIADKLQIPWDRILLERTGKGKPFLTGGSSS-EYPCFNFNVSHQGDYAVLAAEPDRQVGVDIMKTDLPGSSSIEEFFRLMNRQFTEKEWNSIRSMNNDWARLDMFYRHWALKESFIKAIGVGLGFNLQR 194          
BLAST of FC923910 vs. ExPASy Swiss-Prot
Match: LYS5_SCHPO (L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase OS=Schizosaccharomyces pombe GN=lys7 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 58/191 (30.37%), Postives = 94/191 (49.21%), Query Frame = 3
Query:  135 MEKGVQRWVVDISKWDPTPHDFSFALYLLPQHHHSSIIKYVKLEDRKRALVSLLLQYALVHQVLGIPFEEITINRTIEGKPYLESDKAGMDFPNFNFNVSHHGDYVAIA-----SEPLCL----VGLDIVSCTIPLRETIPEFVQNFSSYFSSFEWDNILNAGTSDEILIEFYRYWCLKEAYVKAIGIGVA 680
            M++ V R ++D  +  P       +   L       I +Y    D K AL S+L++  LV   L     E+ I+ T  G+PY +S  A      F+FNVSH+G  V +      S+P  +    +G+DIV C     E    ++++F S F+  EW  I ++ +S ++   F+  W  KEA +KA+GIG++
Sbjct:    1 MKQKVYRLLIDTQEAWPFERTRIPSFKKLSDSERQQIERYYFDMDAKMALASILIKRHLVSTALECSPNEVQISVTKAGRPYCQS--AHCPPIIFDFNVSHYGGIVIVVGAWLPSDPSGMRPINIGVDIVECKPLAFEA--SWMEDFMSVFTPCEWKLIKSSISSIDV---FFLLWTCKEAILKALGIGLS 184          
The following BLAST results are available for this feature:
BLAST of FC923910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ADPPT_RAT1.331e-3037.02L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
ADPPT_MOUSE5.059e-3037.02L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
ADPPT_HUMAN5.594e-2936.46L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
ADPPT_PONAB7.305e-2936.46L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
ADPPT_XENLA1.989e-2633.15L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
LYS5_SCHPO1.808e-1130.37L-aminoadipate-semialdehyde dehydrogenase-phosphop... [more]
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Properties
Property NameValue
Genbank descriptionC31710C11EF StrClemenN Citrus clementina cDNA clone C31710C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923910 ID=FC923910; Name=FC923910; organism=Citrus clementina; type=EST; length=728bp
GAAGACAAGAAGAAACTGCTGTTACAAAATGACAAGTCGTTTAAGTCATT
GAACAAGCCGGACAAATTGGATCCTTTGTAGATGTTCGACTAAATGCCTG
AAAGAGGTTCTTGTAAAGTTGGGATGATGTAGAAATGGAAAAGGGAGTTC
AACGATGGGTGGTGGATATATCAAAGTGGGACCCAACTCCCCACGACTTC
TCTTTTGCTCTCTATCTTCTTCCCCAGCATCACCACTCCTCCATCATCAA
ATATGTGAAACTTGAAGACAGGAAACGGGCACTTGTAAGCCTTTTGCTTC
AGTATGCTCTCGTGCATCAAGTGCTGGGAATCCCATTTGAAGAGATTACC
ATAAACCGGACAATTGAAGGCAAGCCTTATTTGGAAAGCGATAAAGCTGG
CATGGACTTTCCAAATTTTAATTTCAACGTGTCCCATCATGGTGATTATG
TGGCTATAGCATCTGAACCTCTTTGCCTGGTGGGGTTGGACATTGTTTCT
TGTACGATTCCCCTCAGAGAGACAATTCCAGAATTTGTTCAAAACTTCTC
GTCATACTTTTCAAGTTTTGAATGGGATAACATACTGAATGCAGGCACTT
CTGATGAAATTCTGATTGAGTTTTACAGATATTGGTGTCTTAAAGAAGCA
TACGTCAAAGCCATTGGGATTGGAGTAGCTTATGGGTTGGACAAGTAGAG
TTCATCACACTGGCTGGGGCACATATCT
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