FC923922
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 4.075e-63 Identity = 108/152 (71.05%), Postives = 125/152 (82.24%), Query Frame = 1 Query: 28 SKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 SKREIAAFFAHVTHETGH CYI EIN +N YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AGK IGFDGLR P+ VA+DP +SFKTA+WFWM NVH V++QGFGATI+ INGA+EC GK P V AR+ YYKDYC +FGV+PG NL C Sbjct: 134 SKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 2.920e-61 Identity = 106/152 (69.74%), Postives = 123/152 (80.92%), Query Frame = 1 Query: 28 SKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 SKREIAAFFAHVTHETGH CYI EIN ++ YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AG+ IGFDGLR P+ VA+DP +SFKTA+WFWM NVH V+ QGFGATI+ INGA+EC GK P V AR+ YYKDYC +FGV PG NL C Sbjct: 137 SKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 3.814e-61 Identity = 106/160 (66.25%), Postives = 124/160 (77.50%), Query Frame = 1 Query: 4 FGSGSPEVS-KREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 F G EV KREIAAFFAHVTHETGHFCYI EINKSN YCD N+Q+PC G+ YYGRGP+Q++ N NYG AG+ IGF+GL P VA+D V++FKTA+WFWM NVH V+ QGFGATI+ INGA+EC G PAQ+ AR+GYYK YC + V PGPNL C Sbjct: 121 FAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 4.663e-59 Identity = 101/156 (64.74%), Postives = 120/156 (76.92%), Query Frame = 1 Query: 13 GSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 GS KREIAAFFAH THETGHFCYI EINKSN YCD +Q+PC G+ YYGRGP+Q++ N NYG AG+AIGFDGL P VA+D VV+FK A+WFWM +VH VV QGFGAT + + A+ECGG PAQ+ AR+GYY+ YC + GV PGPNL+C Sbjct: 114 GSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 4.825e-56 Identity = 103/158 (65.19%), Postives = 123/158 (77.85%), Query Frame = 1 Query: 13 GSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQN-KQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 GS + SKREIAA FAH THETGHFCYIEEI+ +++ YCDE++ QYPC K Y+GRGPIQL+ N NYG AG A FDGL APETV+ D VVSFKTA+W+WM +V PV+NQGFGATI+ INGA+EC G P VQAR+ YY +YC + GVA G NL+C Sbjct: 113 GSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.027e-54 Identity = 97/160 (60.62%), Postives = 121/160 (75.62%), Query Frame = 1 Query: 4 FGSGSPEVSKREIAAFFAHVTHETGHFCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 F + + V++REIA FAH THETGHFCYIEEIN ++R YCDE N+QYPC PGK Y+GRGPIQL+ N NYGA G+++ + L PE V+ +P V+F+T +WFWM +V PV+NQGFGATI+ ING +EC G V ARI YY+DYC + GV PGPNLSC Sbjct: 110 FPNFANSVTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.453e-52 Identity = 95/160 (59.38%), Postives = 120/160 (75.00%), Query Frame = 1 Query: 10 SGSPEVSKREIAAFFAHVTHETGHFCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHP--VVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 +GS + SKREIAAFFAH HET FCYIEEI+ S YCDE + Q+PC+ GK YYGRGP+Q++ N NYG AG++IGFDGL P+ VA+ PV++F+TA+W+W NVH V QGFGATI+ INGA+EC GK P V R+ YY+ +C +FGV PG NL+C Sbjct: 112 TGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 7.972e-51 Identity = 98/164 (59.76%), Postives = 119/164 (72.56%), Query Frame = 1 Query: 1 QFGS-GSPEVSKREIAAFFAHVTHETGHFCYIEEINKS--NRYCDEQNK-QYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMTNVHPVVNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 +FG+ GS + +KREIAAFFAH++HET + C+IEE + + YCD+ QYPC GK YYGRGP+QL+ N NY AG+AIGFDGL PE VA D SFK A+WFWMTNVH V+NQGFGAT + INGA+EC G+ Q RI +YK YC FGVAPG NL+C Sbjct: 125 KFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.077e-47 Identity = 92/158 (58.23%), Postives = 116/158 (73.42%), Query Frame = 1 Query: 22 EVSKREIAAFFAHVTHETGHFCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWM-TNVHPVV---NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 E KREIAA+FAHVTHETGH CYIEE + +N YC E ++QYPC P K Y+GRGP+QL+ N NY AGK + FDGL P+ V +DP++SFKT++WFW+ V V+ NQGFGATI+ ING EC G AQ+ AR+GYY++YC + GV+PG NL C Sbjct: 94 EDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQE-SQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250
BLAST of FC923922 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.000e-39 Identity = 83/191 (43.46%), Postives = 107/191 (56.02%), Query Frame = 1 Query: 10 SGSPEVSKREIAAFFAHVTHETGH-------------FCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTAVWFWMT------NVHPVV---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYCNKFGVAPGPNLSC 480 +G + KRE+AAF A ++HET CY EEIN + YCD +KQ+PC PGK Y+GRGPIQ++ N NYG AG+A+GFDGLR PE VA ++F+TA+WFWMT + H V+ GFG +NG +EC A+V RIG+Y+ YC GV GPNL C Sbjct: 94 TGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYCQVLGVDVGPNLDC 284 The following BLAST results are available for this feature:
BLAST of FC923922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923922 ID=FC923922; Name=FC923922; organism=Citrus clementina; type=EST; length=596bpback to top |