FC923923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SRR35_HUMAN (35 kDa SR repressor protein OS=Homo sapiens GN=SRRP35 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPGEMRQRHR 465 SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A +++N K GR+I + A RK PG+M+ + R Sbjct: 11 SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SF13A_MOUSE (Splicing factor, arginine/serine-rich 13A OS=Mus musculus GN=Sfrs13a PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPGEMRQR 459 SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I + A RK P +M+ + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SF13A_HUMAN (Splicing factor, arginine/serine-rich 13A OS=Homo sapiens GN=SFRS13A PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.171e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRKRPGEMRQR 459 SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I + A RK P +M+ + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SFR2B_HUMAN (Splicing factor, arginine/serine-rich 2B OS=Homo sapiens GN=SFRS2B PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.650e-12 Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESRK-----RPGEMRQRHR 465 +L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+ M+G GRE+ V +A R+ R GE R R R Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSR 110
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SFRS2_RAT (Splicing factor, arginine/serine-rich 2 OS=Rattus norvegicus GN=Sfrs2 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SFRS2_PIG (Splicing factor, arginine/serine-rich 2 OS=Sus scrofa GN=SFRS2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SFRS2_PANTR (Splicing factor, arginine/serine-rich 2 OS=Pan troglodytes GN=SFRS2 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SFRS2_MOUSE (Splicing factor, arginine/serine-rich 2 OS=Mus musculus GN=Sfrs2 PE=1 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SFRS2_HUMAN (Splicing factor, arginine/serine-rich 2 OS=Homo sapiens GN=SFRS2 PE=1 SV=4) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94
BLAST of FC923923 vs. ExPASy Swiss-Prot
Match: SFRS2_CHICK (Splicing factor, arginine/serine-rich 2 OS=Gallus gallus GN=SFRS2 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 193 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAESR 432 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A R Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGR 94 The following BLAST results are available for this feature:
BLAST of FC923923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC923923 ID=FC923923; Name=FC923923; organism=Citrus clementina; type=EST; length=755bpback to top |