FC923930
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOS11_ARATH (Golgi SNARE 11 protein OS=Arabidopsis thaliana GN=GOS11 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.674e-73 Identity = 143/172 (83.14%), Postives = 152/172 (88.37%), Query Frame = 3 Query: 207 MDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKGSTKVDAAEDDLESGIDWLLKQLQQVNIQMQDWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQAQATLGALGFSRSTLG 722 MDVPSSWDALRKQARK+EAQLDEQMHSYR+LVS+K +K D E DLE+GID LL+QLQQVN QMQ WVSSGGSEMVSHTLTRHQEILQDLTQEFYR RSSL+AKQEHASLLEDFREFDRTRLDLEDG GS EQAL+KEH INR+T QMD VISQAQATLG L F RST G Sbjct: 1 MDVPSSWDALRKQARKIEAQLDEQMHSYRRLVSTKALSKSDGNESDLEAGIDLLLRQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRHRSSLRAKQEHASLLEDFREFDRTRLDLEDGYGS-EQALIKEHMGINRNTAQMDGVISQAQATLGTLVFQRSTFG 171
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOS12_ARATH (Golgi SNARE 12 protein OS=Arabidopsis thaliana GN=GOS12 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.178e-18 Identity = 66/184 (35.87%), Postives = 99/184 (53.80%), Query Frame = 3 Query: 201 SAMDVPSS-WDALRKQARKLEAQLDEQMHSYRKLVS--SKGSTKVDAAEDDLESGIDW---------LLKQLQQVNIQMQDWVSSGG-SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQALLKEHATINRSTGQMDSVISQAQATLGALGFSRS 713 S++D+ S W+ LR++ARK+E LD ++ SY KL + ++G VD + SG W LL++L +N M +S + V+ L RH++IL + TQEF R++ ++ + +EHA LL R D G SP +L+E A+I+ S +D VI QAQAT LG RS Sbjct: 4 SSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGY-VDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSLREHAELLSSVR--DDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQRS 184
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOSR1_HUMAN (Golgi SNAP receptor complex member 1 OS=Homo sapiens GN=GOSR1 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 60/187 (32.09%), Postives = 91/187 (48.66%), Query Frame = 3 Query: 204 AMDVPSSWDALRKQARKLEAQLDEQMHSYRKLVSSKG-STKVDAAEDDLESG--------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQAT 686 A S W+ LRKQAR+LE +LD ++ S+ KL +S S+ D D S I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT Sbjct: 2 AAGTSSYWEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOSR1_CRIGR (Golgi SNAP receptor complex member 1 OS=Cricetulus griseus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12 Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKG-STKVDAAEDDLESG--------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQAT 686 W+ LRKQAR+LE +LD ++ S+ KL +S S+ D D S I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOSR1_BOVIN (Golgi SNAP receptor complex member 1 OS=Bos taurus GN=GOSR1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12 Identity = 58/180 (32.22%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKG-STKVDAAEDDLESG--------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQAT 686 W+ LRKQAR+LE +LD ++ S+ KL +S S+ D D S I+ LL +L +N +M ++ SS G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGRRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGINDKMAEYTSSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFVAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOSR1_RAT (Golgi SNAP receptor complex member 1 OS=Rattus norvegicus GN=Gosr1 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 58/180 (32.22%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKG-STKVDAAEDDLESG--------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQAT 686 W+ LRKQAR+LE +LD ++ S+ KL +S S+ D D S I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSARDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOSR1_PONAB (Golgi SNAP receptor complex member 1 OS=Pongo abelii GN=GOSR1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.794e-12 Identity = 56/178 (31.46%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKG-STKVDAAEDDLESG------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQAT 686 W+ LRKQAR+LE +LD ++ S+ KL +S S+ D D ++ I+ LL +L VN +M ++ +S G + + HTL RH++ILQD T EF++ +++ + +E +L+ R+ D GV + L LKEH + S ++ IS A AT Sbjct: 9 WEDLRKQARQLENELDLKLVSFSKLCTSYSHSSTRDGRRDSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTNSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFMSIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 185
BLAST of FC923930 vs. ExPASy Swiss-Prot
Match: GOSR1_MOUSE (Golgi SNAP receptor complex member 1 OS=Mus musculus GN=Gosr1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 58/180 (32.22%), Postives = 86/180 (47.78%), Query Frame = 3 Query: 225 WDALRKQARKLEAQLDEQMHSYRKLVSSKG-STKVDAAEDDLESG--------------------IDWLLKQLQQVNIQMQDWVSSGG----SEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLEDFREFDRTRLDLEDGVGSPEQAL-LKEHATINRSTGQMDSVISQAQAT 686 W+ LRKQAR+LE +LD ++ S KL +S S D D S I+ LL +L VN +M ++ S G + + HTL RH++ILQD T EF++ +++ A +E +L+ R+ D GV + L LKEH + S ++ IS A AT Sbjct: 9 WEDLRKQARQLENELDLKLVSSSKLCTSYSHSGSRDGGRDRYSSDTTPLLNGSSQDRMFETMAIEIEQLLARLTGVNDKMAEYTHSAGVPSLNAALMHTLQRHRDILQDYTHEFHKTKANFTAIRERENLMGSVRK-DIESYKSGSGVNNRRTELFLKEHDHLRNSDRLIEETISIAMAT 187 The following BLAST results are available for this feature:
BLAST of FC923930 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC923930 ID=FC923930; Name=FC923930; organism=Citrus clementina; type=EST; length=732bpback to top |