FC923943

Overview
NameFC923943
Unique NameFC923943
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length552
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8690 contig Ccv1_Contig8690:436..988. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.708e-54
Identity = 106/183 (57.92%), Postives = 134/183 (73.22%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GA+ AT GSTI++P  I+P + GF  SPFYLD+Q SQF  F  RSQ IR+ GGI+A L+P+E YF +ALYTFDIGQND T + F ++ +E++ A+VPD++NSF+ NVK IY+ G R+FWIHNTGP+GC  F+    P A   KDSAGC K YNE+AQ+FN KLKE V QLRK  P   F +VD
Sbjct:  104 GADFATAGSTIKLPTTIIPAHGGF--SPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLT-EGFLNLTVEEVNATVPDLVNSFSANVKKIYDLGARTFWIHNTGPIGCLSFILTYFPWAE--KDSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVD 281          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: FUCO3_ARATH (Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FXG1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.186e-47
Identity = 92/183 (50.27%), Postives = 121/183 (66.12%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GAN AT GS IR  +  L  +   GFSPF LD+Q  QF  F +RSQ +R RGG+Y +++P+ + FS+ALYTFDIGQND TA  FA+  +E++   VP++I+ F   +K+IY  GGR FWIHNTGP+GC  +V    P+  +  DS GC  P N LAQ FN  LK+AV++LR +    A TYVD
Sbjct:  100 GANFATAGSPIRALNSTLRQS---GFSPFSLDVQFVQFYNFHNRSQTVRSRGGVYKTMLPESDSFSKALYTFDIGQNDLTAGYFANKTVEQVETEVPEIISQFMNAIKNIYGQGGRYFWIHNTGPIGCLAYVIERFPNKASDFDSHGCVSPLNHLAQQFNHALKQAVIELRSSLSEAAITYVD 279          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.004e-46
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GAN AT GST+R P+  +  +   G SP  LD+QL QF  F +RSQ+IR RGG++  L+P++EYFSQALYTFDIGQND TA L  +M  ++I A +PDV +  +  ++ +Y+ GGR FWIHNT PLGC  +V    P   +  D+ GC  P NE+A+Y+N +LK  V++LRK     AFTYVD
Sbjct:  101 GANFATAGSTVRPPNATIAQS---GVSPISLDVQLVQFSDFITRSQLIRNRGGVFKKLLPKKEYFSQALYTFDIGQNDLTAGLKLNMTSDQIKAYIPDVHDQLSNVIRKVYSKGGRRFWIHNTAPLGCLPYVLDRFPVPASQIDNHGCAIPRNEIARYYNSELKRRVIELRKELSEAAFTYVD 280          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.394e-40
Identity = 88/186 (47.31%), Postives = 119/186 (63.98%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMI--RQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCY-VFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GAN ATGGSTIR   R   T   +G SPF LD+Q++QF  FK+RS ++  + +       +P++E F++ALYTFDIGQND +   F  M ++++ A++PD++N  A  V++IY  GGR+FW+HNTGP GC  V +F     AP   D +GC K  NE+A  FN KLKE V+ LRK     A TYVD
Sbjct:  111 GANFATGGSTIR---RQNETIFQYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVG-FRTMSVDQLKATIPDIVNHLASAVRNIYQQGGRTFWVHNTGPFGCLPVNMFYMGTPAPGYLDKSGCVKAQNEMAMEFNRKLKETVINLRKELTQAAITYVD 292          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.407e-32
Identity = 80/183 (43.72%), Postives = 108/183 (59.02%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GAN ATGGS IR      PT   F  SPF+L  Q+SQF+ FK+R+  +  +     + +    YFS+ALYT DIGQND     F +M  E++ A++P +I +F   +K +Y  G R F IHNTGP GC  ++    P+ P  +D  GC KP N +A  FN +LK  + QL+K  PS+ FTYVD
Sbjct:  102 GANFATGGSCIR------PTLACF--SPFHLGTQVSQFIHFKTRTLSLYNQTNGKFNRLSHTNYFSKALYTLDIGQNDLAIG-FQNMTEEQLKATIPLIIENFTIALKLLYKEGARFFSIHNTGPTGCLPYLLKAFPAIP--RDPYGCLKPLNNVAIEFNKQLKNKITQLKKELPSSFFTYVD 273          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: GDL22_ARATH (GDSL esterase/lipase At1g54790 OS=Arabidopsis thaliana GN=At1g54790 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 8.536e-30
Identity = 70/184 (38.04%), Postives = 101/184 (54.89%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRS-QMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            G N A  GSTI      LP N     SPF  D+Q+SQF+ FKSR+ +++ + G  Y   +P  +Y+S+ LY  DIGQND  A  F    ++++ AS+P ++ +F   +K +Y  GGR+ WIHNTGPLGC         +     D  GC   +N+ A+ FNL+L     + +  +P    TYVD
Sbjct:  103 GCNFAAAGSTI------LPANPT-SVSPFSFDLQISQFIRFKSRAIELLSKTGRKYEKYLPPIDYYSKGLYMIDIGQNDI-AGAFYSKTLDQVLASIPSILETFEAGLKRLYEEGGRNIWIHNTGPLGCLAQNIAKFGTDSTKLDEFGCVSSHNQAAKLFNLQLHAMSNKFQAQYPDANVTYVD 278          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: GDL49_ARATH (GDSL esterase/lipase At3g05180 OS=Arabidopsis thaliana GN=At3g05180 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 4.684e-28
Identity = 67/183 (36.61%), Postives = 99/183 (54.10%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            G N A   STI+  +          +SPF   +Q+SQF+ FKS+   + Q+       +P E +FS  LY FDIGQND  A  F    ++++ A VP +++ F   +K +Y  G R++WIHNTGPLGC   V        +  D  GC   +N+ A+ FNL+L     +L + +P++ FTYVD
Sbjct:  109 GCNFAAAASTIQKANAA-------SYSPFGFGVQVSQFITFKSKVLQLIQQDEELQRYLPSEYFFSNGLYMFDIGQNDI-AGAFYTKTVDQVLALVPIILDIFQDGIKRLYAEGARNYWIHNTGPLGCLAQVVSIFGEDKSKLDEFGCVSDHNQAAKLFNLQLHGLFKKLPQQYPNSRFTYVD 283          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: GDL61_ARATH (GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana GN=At4g01130 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24
Identity = 65/183 (35.52%), Postives = 94/183 (51.37%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GAN AT  ST+ +P+  L  +   G SPF L IQL+Q   FK               ++P +  F ++LYTF IGQNDFT++L A + +E++   +P VI   A  +K IY  GGR+F + N  P+GCY  +        A  D  GC  P N+  +Y+N  L + + Q R    +    Y+D
Sbjct:  104 GANFATLASTVLLPNTSLFVS---GISPFSLAIQLNQMKQFKVNVDESHSLDRPGLKILPSKIVFGKSLYTFYIGQNDFTSNL-ASIGVERVKLYLPQVIGQIAGTIKEIYGIGGRTFLVLNLAPVGCYPAILTGYTHTDADLDKYGCLIPVNKAVKYYNTLLNKTLSQTRTELKNATVIYLD 282          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 9.460e-21
Identity = 65/183 (35.52%), Postives = 83/183 (45.36%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GAN A  GS+       LP      + PF L+IQL QF+ FKSR+  +         +M  E  F  ALY  DIGQND        +   ++   +P+VI+     +K +Y+ GGR FW+HNTGPLGC         S     D  GC   YN  A+ FN  L      LR         YVD
Sbjct:  109 GANFAIVGSST------LPR-----YVPFALNIQLMQFLHFKSRALELASISDPLKEMMIGESGFRNALYMIDIGQNDIADSFSKGLSYSRVVKLIPNVISEIKSAIKILYDEGGRKFWVHNTGPLGCLPQKLSMVHSKGF--DKHGCLATYNAAAKLFNEGLDHMCRDLRTELKEANIVYVD 278          
BLAST of FC923943 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.752e-20
Identity = 63/183 (34.43%), Postives = 76/183 (41.53%), Query Frame = 3
Query:    3 GANLATGGSTIRVPDRILPTNEGFGFSPFYLDIQLSQFMLFKSRSQMIRQRGGIYASLMPQEEYFSQALYTFDIGQNDFTADLFADMPIEKIYASVPDVINSFAYNVKSIYNSGGRSFWIHNTGPLGCYVFVFLDSPSAPALKDSAGCXKPYNELAQYFNLKLKEAVVQLRKAFPSTAFTYVD 551
            GAN A  GS        LP N      PF L+IQ+ QF  FKSRS  +         +      F  ALY  DIGQND            +    +P +I     ++K +Y+ GGR FWIHNTGPLGC         S     D  GC   YN  A  FN  L     +LR         Y+D
Sbjct:  112 GANFAIAGSPT------LPKNV-----PFSLNIQVKQFSHFKSRSLELASSSNSLKGMFISNNGFKNALYMIDIGQNDIARSFARGNSYSQTVKLIPQIITEIKSSIKRLYDEGGRRFWIHNTGPLGCLPQKLSMVKSKDL--DQHGCLVSYNSAATLFNQGLDHMCEELRTELRDATIIYID 281          
The following BLAST results are available for this feature:
BLAST of FC923943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
EST_HEVBR1.708e-5457.92Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
FUCO3_ARATH1.186e-4750.27Alpha-L-fucosidase 3 OS=Arabidopsis thaliana GN=FX... [more]
GDL53_ARATH1.004e-4650.27GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
GDL76_ARATH2.394e-4047.31GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL54_ARATH1.407e-3243.72GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]
GDL22_ARATH8.536e-3038.04GDSL esterase/lipase At1g54790 OS=Arabidopsis thal... [more]
GDL49_ARATH4.684e-2836.61GDSL esterase/lipase At3g05180 OS=Arabidopsis thal... [more]
GDL61_ARATH3.142e-2435.52GDSL esterase/lipase At4g01130 OS=Arabidopsis thal... [more]
GDL2_ARATH9.460e-2135.52GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]
LIP4_ARATH2.752e-2034.43GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC31710G08EF StrClemenN Citrus clementina cDNA clone C31710G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923943 ID=FC923943; Name=FC923943; organism=Citrus clementina; type=EST; length=552bp
ACGGAGCAAATCTTGCCACCGGAGGATCAACAATTAGAGTACCAGATAGA
ATCCTACCAACCAATGAAGGATTCGGATTCAGCCCTTTCTACTTGGATAT
CCAATTATCACAATTCATGCTGTTCAAATCCAGATCACAGATGATCAGAC
AACGAGGAGGAATCTATGCAAGTTTAATGCCCCAGGAGGAATACTTTTCC
CAAGCTTTATACACTTTCGATATTGGTCAGAATGATTTTACTGCCGATTT
GTTTGCTGACATGCCTATAGAGAAAATCTATGCCTCTGTCCCTGATGTAA
TCAACAGTTTCGCATACAACGTTAAGAGTATATACAATTCCGGAGGGAGG
TCATTTTGGATTCACAACACAGGACCTTTGGGTTGCTATGTTTTTGTTTT
TTTAGATTCTCCTTCAGCACCAGCGTTGAAGGACTCTGCGGGCTGCNGTA
AGCCATACAATGAATTAGCTCAATATTTCAATCTCAAGTTGAAGGAAGCT
GTAGTTCAACTCAGGAAAGCTTTTCCTTCGACTGCATTTACTTATGTTGA
TG
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