FC924934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: APRR3_ARATH (Two-component response regulator-like APRR3 OS=Arabidopsis thaliana GN=APRR3 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.177e-48 Identity = 102/173 (58.96%), Postives = 121/173 (69.94%), Query Frame = 3 Query: 210 MCYEQKEVGNGVAGEGHGLGSSEEDESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 MC+ E G+ V E GSSEEDE RV+D + N +Q+ V++WER+LP RSLKVLLVENDDSTRH+V+ALL+NCSYEVTAV + L AW+ILED + ID+VLTEVDMPV SG GLL KIM+HKTLKNIPV MMS DSM ++FKCLS GA D Sbjct: 1 MCFNNIETGDEVETERQVFGSSEEDEFRVEDTARNTNN----VQISQ-----QQQQPLAHVVKWERYLPVRSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVD 164
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSI (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. indica GN=PRR73 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 7.525e-42 Identity = 93/170 (54.71%), Postives = 110/170 (64.71%), Query Frame = 3 Query: 225 KEVGNGVAGEGHGLGSSEED--ESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 K GNG+ GH S EE+ +D N ++ P Q + ++RWERFLP ++L+VLLVENDDSTR VVSALLR C YEV N LHAW+ LEDL NHID+VLTEV MP +SGIGLL KI +HK K+IPV MMS DSMG +FKCLSKGA D Sbjct: 18 KGTGNGILENGHSHKSEEEEWRNGMGEDLPNGHSTPPEPQQTDE------QKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVD 181
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: PRR73_ORYSJ (Two-component response regulator-like PRR73 OS=Oryza sativa subsp. japonica GN=PRR73 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.189e-41 Identity = 92/170 (54.12%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 225 KEVGNGVAGEGHGLGSSEED--ESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 K GNG+ GH EE+ +D N ++ P Q + ++RWERFLP ++L+VLLVENDDSTR VVSALLR C YEV N LHAW+ LEDL NHID+VLTEV MP +SGIGLL KI +HK K+IPV MMS DSMG +FKCLSKGA D Sbjct: 18 KGTGNGILENGHSHKPEEEEWRNGMGEDLPNGHSTPPEPQQTDE------QKEHQVQIVRWERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVD 181
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: APRR7_ARATH (Two-component response regulator-like APRR7 OS=Arabidopsis thaliana GN=APRR7 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.859e-41 Identity = 84/150 (56.00%), Postives = 106/150 (70.67%), Query Frame = 3 Query: 279 EDESRVDDAVNSNNGPGGTIQVHDGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 E+E ++ NG G +Q+ + + WERFL R+++VLLVENDD TR++V+ALLRNCSYEV +N + AWK+LEDL NHIDIVLTEV MP +SGIGLLCKI+ HK+ +NIPV MMS DSMG++FKCLSKGA D Sbjct: 36 EEEKTNGITMDVRNGSSGGLQI-------PLSQQTAATVCWERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVD 178
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSJ (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. japonica GN=PRR37 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.339e-33 Identity = 70/110 (63.64%), Postives = 82/110 (74.55%), Query Frame = 3 Query: 399 WERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 WERF+ +++KVLLV++DDSTR VVSALLR+C YEV N AW LED+ N ID+VLTEV MP VSGI LL +IM H KNIPV MMS D+MG +FKCLSKGA D Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVD 162
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: PRR37_ORYSI (Two-component response regulator-like PRR37 OS=Oryza sativa subsp. indica GN=PRR37 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.339e-33 Identity = 70/110 (63.64%), Postives = 82/110 (74.55%), Query Frame = 3 Query: 399 WERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 WERF+ +++KVLLV++DDSTR VVSALLR+C YEV N AW LED+ N ID+VLTEV MP VSGI LL +IM H KNIPV MMS D+MG +FKCLSKGA D Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVD 162
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: APRR5_ARATH (Two-component response regulator-like APRR5 OS=Arabidopsis thaliana GN=APRR5 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 5.059e-30 Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 390 VIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 +++WERFLP +L+VLLVE DDSTR +++ALLR CSY V AV + L AW++L+ +D++LTEVD+P +SG LL IM H KNIPV MMS +DS+ ++KC+ KGA D Sbjct: 38 LVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAAD 150
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: APRR9_ARATH (Two-component response regulator-like APRR9 OS=Arabidopsis thaliana GN=APRR9 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.922e-29 Identity = 58/127 (45.67%), Postives = 90/127 (70.87%), Query Frame = 3 Query: 348 DGFXXXXXXXXXGSVIRWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 DG V++WE++LP L+VLLVE+D STR +++ALLR C Y+V AV++ L AW++L++ +++ID++LTE+D+P +SG LL +M H+ KNIPV MMS +DS+ ++ KC+ +GA D Sbjct: 11 DGMETIKNRVKSSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAAD 137
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: PRR95_ORYSJ (Two-component response regulator-like PRR95 OS=Oryza sativa subsp. japonica GN=PRR95 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.930e-27 Identity = 58/111 (52.25%), Postives = 78/111 (70.27%), Query Frame = 3 Query: 396 RWERFLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 R R LP ++VLL E DDSTRH++ ALLR C Y V A ++ + AW IL++ + +ID+VLTEV++P++SG LL IM H KNIPV MMS DS+ ++FKC+ KGA D Sbjct: 33 RETRMLPRMPVRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAAD 143
BLAST of FC924934 vs. ExPASy Swiss-Prot
Match: APRR1_ARATH (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana GN=APRR1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 41/107 (38.32%), Postives = 62/107 (57.94%), Query Frame = 3 Query: 408 FLPTRSLKVLLVENDDSTRHVVSALLRNCSYEVTAVANSLHAWKILEDLTNHIDIVLTEVDMPVVSGIGLLCKIMTHKTLKNIPVKMMSPKDSMGILFKCLSKGAGD 728 F+ +++LL +ND ++ V LL CSY+VTAV ++ L IDI+L E+D+P+ G+ +L I K L+ IPV MMS +D + ++ KCL GA D Sbjct: 13 FIDRSRVRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAKGMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAAD 119 The following BLAST results are available for this feature:
BLAST of FC924934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924934 ID=FC924934; Name=FC924934; organism=Citrus clementina; type=EST; length=730bpback to top |