FC924961
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP4E1_MOUSE (AP-4 complex subunit epsilon-1 OS=Mus musculus GN=Ap4e1 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32 Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 280 LVKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINEETIPAGLPQV 684 L++ + SK EE++++ E+ +LK +S P + MKE ++RL+Y EMLG+DASFGYIHA+K+ NL+ KR GYLAV+LFL+E H+L++L+VNT+ KDL+S N + VC AL V ++ E IPA LP + Sbjct: 38 LIRGVTALSSKHEEEKLIQQELSSLKATVSAPTTTLKTMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLI 172
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP4E1_HUMAN (AP-4 complex subunit epsilon-1 OS=Homo sapiens GN=AP4E1 PE=1 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 67/135 (49.63%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 280 LVKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINEETIPAGLPQV 684 LV+ I SK EE++++ E+ +LK +S P + MKE ++RL+Y EMLG+DASFGYIHA+K+ NL+ KR GYLAV+LFL+E H+L++L+VNT+ KDL+S N + VC AL V ++ E IPA LP + Sbjct: 39 LVRGITALTSKHEEEKLIQQELSSLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPCEMIPAVLPLI 173
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP4E_DICDI (AP-4 complex subunit epsilon OS=Dictyostelium discoideum GN=ap4e1 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.441e-31 Identity = 71/140 (50.71%), Postives = 98/140 (70.00%), Query Frame = 1 Query: 268 EFLDLVKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINEETIPAGLPQVV 687 +F DLVK+IGE+ S+ EE I+ NEI LK S+ K K +E +IR++Y MLG+D FG+I A+ MT D ++ KRTGYL ++L L E H+L+I+ VN+I K L S NYL VC+AL A+CKLI+ +TIPA L +V+ Sbjct: 33 DFYDLVKNIGESTSREEEVHIIQNEIIKLKSCFSKEQ-SKDKKRECLIRMIYCHMLGYDVPFGHIQALNMTQDSEILNKRTGYLTLSLCLPERHELLIMAVNSILKGLNSSNYLEVCSALTAMCKLIDNDTIPAFLQKVL 171
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP1G1_YEAST (AP-1 complex subunit gamma-1 OS=Saccharomyces cerevisiae GN=APL4 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 38/125 (30.40%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 283 VKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINEE 657 +K + A++ A+E I+ + ++ ++ + +P K + I +L+Y+ +LG FG + ++ + D+ V KR GYLA TL L+E DL+ L+ N + DL N V AL ++ L + E Sbjct: 9 IKDVRGAKTLADERAIITKQSAKIRTKLRDDHLPHEKRRVNIQKLLYLYILGEKTHFGQVESINLIASDDFVDKRLGYLAATLLLDESEDLLTLLTNMLNNDLHHPNKYAVSLALTSLGFLSSPE 133
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP1G1_SCHPO (AP-1 complex subunit gamma-1 OS=Schizosaccharomyces pombe GN=apl4 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.114e-13 Identity = 37/117 (31.62%), Postives = 68/117 (58.12%), Query Frame = 1 Query: 283 VKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNA 633 +K++ +++ AEE +L E +++ I + R ++ + +L+Y+ +LG FG I +K+ + KR GYLA L L+E+ +++ L+ N++Q DLKS + IV AL+A Sbjct: 37 IKAVRASKTTAEEHTTILKESAQIRKNIRQGSNDMRMRRKNVAKLLYLFLLGEPTHFGQIECLKLLSSSRFMDKRLGYLAAMLLLDENQEVLTLLTNSLQNDLKSRDKFIVGLALSA 153
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP2A2_DICDI (AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum GN=ap2a1-1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.723e-13 Identity = 36/128 (28.12%), Postives = 74/128 (57.81%), Query Frame = 1 Query: 277 DLVKSIGEARSKAEEDRIVLNEIETLKRRISE-PDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINEE 657 + + + + SK E++ V E+ +++ E +I + ++Y+ +LVY+ MLG++ FG++ AV + K+ GY+A+ + LNE H+++ LI+N+ ++DL + + AL A+C + +E Sbjct: 20 NFISDLRNSPSKENEEKRVTKEMAHIRKEFKENKNIDGYQRRKYVCKLVYMYMLGYELDFGHMEAVTLLSSTKFSEKQIGYIALGILLNEQHEMLPLIINSFKEDLLARSDYFQSLALAAICNIGGKE 147
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP2A_SCHPO (AP-2 complex subunit alpha OS=Schizosaccharomyces pombe GN=apl3 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.488e-12 Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = 1 Query: 316 EEDRIVLNEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINEE 657 +E++ V E+ ++ + + K+Y+ +L+Y+ MLG+ +FG++ A K+ K GYLAV L LNE+H+L+ L++N+I+KDL S + L AL+ + + E Sbjct: 24 DEEKRVNVELAKIRAKFQSSTLSAYDRKKYVSKLLYIYMLGYPITFGHMEAAKLLSGTKYSEKLIGYLAVALLLNENHELMKLVINSIKKDLLSHDSLQNSLALHTIANIGGRE 137
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP2A1_MOUSE (AP-2 complex subunit alpha-1 OS=Mus musculus GN=Ap2a1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 37/139 (26.62%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 283 VKSIGEARSKAEEDRIVLNEIETLKRRIS-EPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINE---ETIPAGLPQVV 687 + I +SK E + + E+ ++ + + + K+Y+ +L+++ +LGHD FG++ AV + + K+ GYL +++ +N + +LI LI N I+ DL S N +C AL+ + + + E A +P+++ Sbjct: 17 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMGEAFAADIPRIL 155
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP2A1_HUMAN (AP-2 complex subunit alpha-1 OS=Homo sapiens GN=AP2A1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 37/139 (26.62%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 283 VKSIGEARSKAEEDRIVLNEIETLKRRIS-EPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNAVCKLINE---ETIPAGLPQVV 687 + I +SK E + + E+ ++ + + + K+Y+ +L+++ +LGHD FG++ AV + + K+ GYL +++ +N + +LI LI N I+ DL S N +C AL+ + + + E A +P+++ Sbjct: 17 ISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMCLALHCIANVGSREMGEAFAADIPRIL 155
BLAST of FC924961 vs. ExPASy Swiss-Prot
Match: AP1G_DICDI (AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.260e-11 Identity = 39/145 (26.90%), Postives = 74/145 (51.03%), Query Frame = 1 Query: 262 SKEFLDLVKSIGEARSKAEEDRIVLNEIETLKRRISEPDIPKRKMKEYIIRLVYVEMLGHDASFGYIHAVKMTHDDNLVLKRTGYLAVTLFLNEDHDLIILIVNTIQKDLKSDNYLIVCAALNA---VCKLINEETIPAGLPQVV 687 S + DL+K++ ++ AEE + E ++ + E D+ R+ + +L+Y+ MLG+ FG + +K+ + KR GYL + L L+E ++++L N I+ D+ + N IV +L A +C I + +V+ Sbjct: 2 SSKLRDLIKTVRSCKTAAEERSQIAKESALIRTAMKEEDLESRQRN--VAKLLYIHMLGYPTQFGQMECLKLIVSPSYADKRIGYLGLMLLLDEKQEVLLLATNCIRGDIMNSNQFIVGVSLCAFGNICSTAMARDISPEIEKVI 144 The following BLAST results are available for this feature:
BLAST of FC924961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC924961 ID=FC924961; Name=FC924961; organism=Citrus clementina; type=EST; length=689bpback to top |