FC925003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: FTHS_ARATH (Formate--tetrahydrofolate ligase OS=Arabidopsis thaliana GN=THFS PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 9.523e-104 Identity = 186/233 (79.83%), Postives = 198/233 (84.98%), Query Frame = 2 Query: 50 SKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 S + RKL+VVSPVPADIDIANSVEPLHISEIA++LN+ P HYDLYGKYKAKVLLS DEL+G DGYYVVVGGITPTPLGEGKSTTTVGLCQALGA+LDKKVVTCLRQPSQGPTFGIK YSQVIPMDEFNLHLTGDIH RIFHE SQSDKALFNRLCPPNKEG+RSFS+IMFRRL KLGISKT PE+LTPEEI +FARLDIDP SITW+RVMD Sbjct: 2 SSSTRKLEVVSPVPADIDIANSVEPLHISEIAKDLNINPLHYDLYGKYKAKVLLSAFDELQGQEDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITASNNLLAAAIDTRIFHETSQSDKALFNRLCPPNKEGKRSFSDIMFRRLTKLGISKTSPEELTPEEIKKFARLDIDPASITWRRVMD 234
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: FTHS_SPIOL (Formate--tetrahydrofolate ligase OS=Spinacia oleracea PE=1 SV=3) HSP 1 Score: 373.244 bits (957), Expect = 8.062e-103 Identity = 182/234 (77.78%), Postives = 200/234 (85.47%), Query Frame = 2 Query: 47 SSKTVRKLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 SSKTVRKL+V +PVPADIDIAN+VEPLHI++IA +LNL P HYDLYGKYKAKVLLSVLDE++ + DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIK YSQVIPMDEFNLHLTGDIH R+FHE++QSDKALFNRLCPPNKEG+R+F NIM RRLKKLGI KT P+DLTPEE+ +FARLDIDP SITW+RVMD Sbjct: 4 SSKTVRKLEVATPVPADIDIANAVEPLHIADIAADLNLSPRHYDLYGKYKAKVLLSVLDEVQETQDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKGGAAGGGYSQVIPMDEFNLHLTGDIHAITASNNLLAAAIDTRMFHESTQSDKALFNRLCPPNKEGKRTFCNIMHRRLKKLGIDKTNPDDLTPEEVTKFARLDIDPDSITWRRVMD 237
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TC_HUMAN (C-1-tetrahydrofolate synthase, cytoplasmic OS=Homo sapiens GN=MTHFD1 PE=1 SV=3) HSP 1 Score: 264.618 bits (675), Expect = 4.038e-70 Identity = 138/227 (60.79%), Postives = 163/227 (71.81%), Query Frame = 2 Query: 68 LQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 L + +PVP+DIDI+ S +P I ++A+E+ L +LYG+ KAKVLLS L+ L+ DG YVVV GITPTPLGEGKSTTT+GL QALGA L + V C+RQPSQGPTFGIK YSQVIPM+EFNLHLTGDIH RIFHE +Q+DKALFNRL P+ G R FS+I RRLK+LGI KT P LT EEINRFARLDIDP +ITW+RV+D Sbjct: 310 LNLKTPVPSDIDISRSCKPKPIGKLAREIGLLSEEVELYGETKAKVLLSALERLKHRPDGKYVVVTGITPTPLGEGKSTTTIGLVQALGAHLYQNVFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAITAANNLVAAAIDARIFHELTQTDKALFNRLV-PSVNGVRRFSDIQIRRLKRLGIEKTDPTTLTDEEINRFARLDIDPETITWQRVLD 535
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TC_RAT (C-1-tetrahydrofolate synthase, cytoplasmic OS=Rattus norvegicus GN=Mthfd1 PE=1 SV=3) HSP 1 Score: 263.077 bits (671), Expect = 1.175e-69 Identity = 137/228 (60.09%), Postives = 162/228 (71.05%), Query Frame = 2 Query: 65 KLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 KL + +PVP+DI I+ S +P I +A+E+ L +LYG+ KAKVLLS LD L+ DG YVVV GITPTPLGEGKSTTT+GL QALGA L + V C+RQPSQGPTFGIK YSQVIPM+EFNLHLTGDIH RIFHE +Q+DKALFNRL P+ G R FS+I RRL++LGI KT P LT +EINRFARLDIDP +ITW+RV+D Sbjct: 309 KLNLKTPVPSDIAISRSCKPKLIGNLAREIGLLTEEVELYGETKAKVLLSALDRLKHQPDGKYVVVTGITPTPLGEGKSTTTIGLVQALGAHLHQNVFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAITAANNLVAAAIDARIFHELTQTDKALFNRLV-PSVNGVRKFSDIQIRRLRRLGIEKTDPAALTDDEINRFARLDIDPETITWQRVLD 535
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TC_PONAB (C-1-tetrahydrofolate synthase, cytoplasmic OS=Pongo abelii GN=MTHFD1 PE=2 SV=3) HSP 1 Score: 262.692 bits (670), Expect = 1.535e-69 Identity = 138/227 (60.79%), Postives = 162/227 (71.37%), Query Frame = 2 Query: 68 LQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 L + +P P+DIDI+ S +P I ++A+E+ L +LYG+ KAKVLLS L+ L+ DG YVVV GITPTPLGEGKSTTTVGL QALGA L + V C+RQPSQGPTFGIK YSQVIPM+EFNLHLTGDIH RIFHE +Q+DKALFNRL P+ G R FS+I RRLK+LGI KT P LT EEINRFARLDIDP +ITW+RV+D Sbjct: 310 LNLKTPDPSDIDISRSCKPKPIGKLAREIGLLSEEVELYGETKAKVLLSALERLKHRPDGKYVVVTGITPTPLGEGKSTTTVGLVQALGAHLYQNVFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAFTAANNLVAAAIDARIFHELTQTDKALFNRLV-PSVNGVRKFSDIQIRRLKRLGIEKTDPTTLTDEEINRFARLDIDPETITWQRVLD 535
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TC_MOUSE (C-1-tetrahydrofolate synthase, cytoplasmic OS=Mus musculus GN=Mthfd1 PE=1 SV=3) HSP 1 Score: 262.307 bits (669), Expect = 2.004e-69 Identity = 137/228 (60.09%), Postives = 162/228 (71.05%), Query Frame = 2 Query: 65 KLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 KL + +PVP+DI I+ S +P I +A+E+ L +LYG+ KAKVLLS LD L+ DG YVVV GITPTPLGEGKSTTT+GL QALGA L + V C+RQPSQGPTFGIK YSQVIPM+EFNLHLTGDIH RIFHE +Q+DKALFNRL P+ G R FS+I RRL++LGI KT P LT +EINRFARLDIDP +ITW+RV+D Sbjct: 309 KLNLKTPVPSDIAISRSCKPKLIGNLAREIGLLTEEVELYGETKAKVLLSALDRLKYQPDGKYVVVTGITPTPLGEGKSTTTIGLVQALGAHLRQNVFACVRQPSQGPTFGIKGGAAGGGYSQVIPMEEFNLHLTGDIHAITAANNLVAAAIDARIFHELTQTDKALFNRLV-PSVNGIRKFSDIQIRRLRRLGIEKTDPTTLTDDEINRFARLDIDPETITWQRVLD 535
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TM_HUMAN (Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Homo sapiens GN=MTHFD1L PE=1 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 1.029e-65 Identity = 129/228 (56.58%), Postives = 158/228 (69.30%), Query Frame = 2 Query: 65 KLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 KLQ +SPVP+DI+I+ P + +A+E+ L + ++YGK KAKV LSVL+ L+ ADG YV+V GITPTPLGEGKST T+GL QAL A L+ CLRQPSQGPTFG+K Y+QVIPM+EFNLHLTGDIH RI HE +Q+DKAL+NRL P G R FS I RLKKLGI+KT P LT EE+++FARLDIDP +ITW+RV+D Sbjct: 352 KLQPLSPVPSDIEISRGQTPKAVDVLAKEIGLLADEIEIYGKSKAKVRLSVLERLKDQADGKYVLVAGITPTPLGEGKSTVTIGLVQALTAHLNVNSFACLRQPSQGPTFGVKGGAAGGGYAQVIPMEEFNLHLTGDIHAITAANNLLAAAIDTRILHENTQTDKALYNRLV-PLVNGVREFSEIQLARLKKLGINKTDPSTLTEEEVSKFARLDIDPSTITWQRVLD 578
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TM_BOVIN (Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Bos taurus GN=MTHFD1L PE=2 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 6.672e-65 Identity = 127/228 (55.70%), Postives = 159/228 (69.74%), Query Frame = 2 Query: 65 KLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 KLQ +SPVP+DI+I+ + P + +A+E+ L + ++YGK KAKV LS+L+ L+ ADG YV+V GITPTPLGEGKST T+GL QAL A L+ CLRQPSQGPTFG+K Y+QVIPM+EFNLHLTGDIH RI HE +Q+DKAL+NRL P+ G R FS I RLK+LGI+KT P LT EE+ +FARLDIDP +ITW+RV+D Sbjct: 349 KLQPLSPVPSDIEISRAQTPKAVEILAKEIGLLADEIEIYGKSKAKVRLSLLERLKDQADGKYVLVAGITPTPLGEGKSTVTIGLVQALTAHLNVNSFACLRQPSQGPTFGVKGGAAGGGYAQVIPMEEFNLHLTGDIHAITAANNLLAAAIDARILHENTQTDKALYNRLV-PSVNGVREFSKIQLARLKRLGINKTDPSALTEEEMRKFARLDIDPSTITWQRVVD 575
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TM_MOUSE (Monofunctional C1-tetrahydrofolate synthase, mitochondrial OS=Mus musculus GN=Mthfd1l PE=1 SV=2) HSP 1 Score: 244.588 bits (623), Expect = 4.325e-64 Identity = 126/228 (55.26%), Postives = 155/228 (67.98%), Query Frame = 2 Query: 65 KLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 KLQ +SPVP+DI+I+ P + +A+E+ L + ++YGK KAKV LS+L+ L+ DG YV+V GITPTPLGEGKST T+GL QAL A L CLRQPSQGPTFG+K Y+QVIPM+EFNLHLTGDIH RI HE++Q+DKAL+NRL P G R FS I RLKKLGI KT P LT EE+ +FARL+IDP +ITW+RV+D Sbjct: 351 KLQPLSPVPSDIEISRGQTPKAVDVLAKEIGLLADEIEIYGKSKAKVQLSLLERLKDQTDGKYVLVAGITPTPLGEGKSTVTIGLVQALTAHLKVNSFACLRQPSQGPTFGVKGGAAGGGYAQVIPMEEFNLHLTGDIHAITAANNLLAAAIDTRILHESTQTDKALYNRLV-PLVNGVREFSEIQLSRLKKLGIHKTDPSTLTEEEVRKFARLNIDPATITWQRVLD 577
BLAST of FC925003 vs. ExPASy Swiss-Prot
Match: C1TC_YEAST (C-1-tetrahydrofolate synthase, cytoplasmic OS=Saccharomyces cerevisiae GN=ADE3 PE=1 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.065e-62 Identity = 126/250 (50.40%), Postives = 166/250 (66.40%), Query Frame = 2 Query: 11 N*FIKKKK*LMASSKTVR----KLQVVSPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPSQGPTFGIKXXXXXXXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLKKLGISKTKPEDLTPEEINRFARLDIDPPSITWKRVMD 748 N I K+ + SSK ++ L++++PVP+DIDI+ + +P I+++AQEL + + +LYG YKAK+ V++ L+ +G Y++V GITPTPLGEGKSTTT+GL QAL A L K + +RQPS GPT G+K YSQVIPMDEFNLHLTGDIH R+FHE +Q + A F P K G+R F+ M RRL +LGI KT P+DLTPEEIN+FARL+IDP +IT KRV+D Sbjct: 291 NTLIAAKRQMEESSKPLQIPPLPLKLLTPVPSDIDISRAQQPKLINQLAQELGIYSHELELYGHYKAKISPKVIERLQTRQNGKYILVSGITPTPLGEGKSTTTMGLVQALTAHLGKPAIANVRQPSLGPTLGVKGGAAGGGYSQVIPMDEFNLHLTGDIHAIGAANNLLAAAIDTRMFHETTQKNDATFYNRLVPRKNGKRKFTPSMQRRLNRLGIQKTNPDDLTPEEINKFARLNIDPDTITIKRVVD 540 The following BLAST results are available for this feature:
BLAST of FC925003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 309
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925003 ID=FC925003; Name=FC925003; organism=Citrus clementina; type=EST; length=750bpback to top |