FC925009

Overview
NameFC925009
Unique NameFC925009
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3112 contig Ccv1_Contig3112:24..658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_MYCLE (Hypoxanthine-guanine phosphoribosyltransferase OS=Mycobacterium leprae GN=hpt PE=3 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 5.883e-34
Identity = 77/185 (41.62%), Postives = 110/185 (59.46%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXAT----GAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 546
            I++V+ TQ+QI  R+ EL AQI HD+                  GA +F+ DL R I LP   +F+   SYGS   SSG   +  D   D+ D++V++VED+VD+G TLS L+ NL ++   S+ VCTLL KP   +  V++      Y GF+ P+ FVVGYG+D+ E YR+LPY+G+L P  Y+
Sbjct:   23 IKSVMLTQEQIQARIAELGAQIGHDYRDRSPASDQDLLLVTVLKGAVIFVTDLARAIPLPTQFEFMAVSSYGSSMSSSGVVRILKDLDRDIHDRNVLIVEDVVDSGLTLSWLLRNLATRRPQSLQVCTLLRKPDALRANVDIT-----YVGFDIPNDFVVGYGLDYDERYRDLPYIGMLDPRVYQ 202          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_BACSU (Hypoxanthine-guanine phosphoribosyltransferase OS=Bacillus subtilis GN=hprT PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 4.980e-33
Identity = 73/181 (40.33%), Postives = 113/181 (62.43%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 546
            IE VL ++++I ++V EL A++T ++              GA  F+ADL+++I   + +DF+   SYG+ T+SSG   +  D    V+ + ++++EDI+D+G TLS L+     + A S+ + TLLDKP+ RK  ++       + GFE PD FVVGYG+D+AE YRNLPY+GVLKP  Y+
Sbjct:    6 IEKVLISEEEIQKKVKELGAELTSEYQDTFPLAIGVLK--GALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIK-----ADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYE 179          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_STAAW (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MW2) GN=hpt PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.449e-32
Identity = 74/180 (41.11%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 543
            ++ VL T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    5 LKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_STAAS (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MSSA476) GN=hpt PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.449e-32
Identity = 74/180 (41.11%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 543
            ++ VL T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    5 LKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_STAAR (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain MRSA252) GN=hpt PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.449e-32
Identity = 74/180 (41.11%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 543
            ++ VL T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    5 LKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_STAAN (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain N315) GN=hpt PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.449e-32
Identity = 74/180 (41.11%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 543
            ++ VL T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    5 LKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_STAAM (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hpt PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.449e-32
Identity = 74/180 (41.11%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 543
            ++ VL T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    5 LKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_STAAC (Hypoxanthine-guanine phosphoribosyltransferase OS=Staphylococcus aureus (strain COL) GN=hpt PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.449e-32
Identity = 74/180 (41.11%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 543
            ++ VL T++ I     EL AQ+T D+              G+ +F++DL++ I   +S+DF+   SY  GT S+G   +  D    +++K V+++EDI++TGTTL S+   L S+  +S+ + TLLDKP RRK  +E       Y G + PD FVVGYG+D+ ELYRNLPY+G LKPE Y
Sbjct:    5 LKEVLLTEEDIQNICKELGAQLTKDYQGKPLVCVGILK--GSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAK-----YVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVY 177          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: HPRT_ENTFA (Hypoxanthine-guanine phosphoribosyltransferase OS=Enterococcus faecalis GN=hpt PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.892e-32
Identity = 74/181 (40.88%), Postives = 112/181 (61.88%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECYK 546
            IE VL ++++I  +  EL  Q+T ++              GA  F+ADL R I+  + +DF+   SYG+ T+SSG   +  D   +V+ +H+++VEDI+D+G TL+ L+     + A+SV + TLLDKP  R + ++       Y GF+ P+ FVVGYG+D+AE YRNLPY+GVLKPE Y+
Sbjct:    6 IEKVLISKEEILAKSAELGKQLTEEYQGKNPLVVGILK--GAVPFMADLTREINTYLELDFMDVSSYGNATVSSGEVKIVKDLDTNVEGRHILIVEDIIDSGRTLAYLVDLFRYRKAASVKIVTLLDKPEGRVVDIK-----ADYVGFDVPNEFVVGYGLDYAETYRNLPYIGVLKPEVYE 179          
BLAST of FC925009 vs. ExPASy Swiss-Prot
Match: TILS_LISMO (Bifunctional protein tilS/hprT OS=Listeria monocytogenes GN=tilS/hprT PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.216e-32
Identity = 71/180 (39.44%), Postives = 111/180 (61.67%), Query Frame = 1
Query:    4 IENVLWTQDQISRRVTELAAQITHDFNXXXXXXXXXXXATGAFLFLADLVRNIHLPISVDFIRAESYGSGTLSSGAPVLSLDSKLDVKDKHVILVEDIVDTGTTLSSLIANLVSKGASSVSVCTLLDKPARRKIQVELVGEGKFYRGFECPDYFVVGYGMDFAELYRNLPYVGVLKPECY 543
            I+ VL ++D++  ++ EL  ++T ++              GA  F+ DL++ +   + +DF+   SYG+GT+SSG   +  D    V+ + V+++EDI+D+G TLS L+  +  + A SV + TLLDKPA R +++E       Y GF  P+ FVVGYG+D+AE YRNLPY+G+LKPE Y
Sbjct:  474 IQKVLISEDELQEKIRELGRELTTEYEGRNPLVVGVLK--GATPFMTDLLKRVDTYLEMDFMDVSSYGNGTVSSGEVKIIKDLNASVEGRDVLVIEDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIE-----ADYVGFVVPNEFVVGYGLDYAERYRNLPYIGILKPEIY 646          
The following BLAST results are available for this feature:
BLAST of FC925009 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
HPRT_MYCLE5.883e-3441.62Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_BACSU4.980e-3340.33Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAW1.449e-3241.11Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAS1.449e-3241.11Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAR1.449e-3241.11Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAN1.449e-3241.11Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAM1.449e-3241.11Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_STAAC1.449e-3241.11Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
HPRT_ENTFA1.892e-3240.88Hypoxanthine-guanine phosphoribosyltransferase OS=... [more]
TILS_LISMO4.216e-3239.44Bifunctional protein tilS/hprT OS=Listeria monocyt... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YP10FM1 TF Citrus clementina cDNA clone KN0AAP6YP10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925009 ID=FC925009; Name=FC925009; organism=Citrus clementina; type=EST; length=635bp
CACATAGAGAACGTGCTTTGGACACAGGACCAAATTTCTCGCCGAGTAAC
GGAGCTTGCCGCCCAAATCACCCACGATTTCAACTCCGTTTCCCCGCCGC
CTGTCGTCGTGGGTGTCGCCACCGGAGCGTTTCTCTTCTTGGCTGACCTG
GTCAGAAATATTCACCTCCCTATCTCCGTTGATTTCATTCGTGCTGAATC
CTACGGCTCCGGTACTCTCTCCAGTGGAGCCCCTGTTCTTTCCCTCGATT
CGAAACTCGATGTTAAGGACAAGCACGTAATCTTGGTCGAGGACATTGTA
GATACAGGAACCACATTATCATCTCTTATTGCAAACTTGGTATCCAAAGG
AGCATCTTCTGTCTCAGTCTGCACTCTCCTTGATAAACCAGCCAGAAGAA
AGATTCAGGTGGAGCTAGTGGGTGAAGGAAAGTTCTATCGGGGATTTGAG
TGTCCAGATTATTTCGTTGTGGGCTATGGAATGGACTTCGCTGAATTATA
TAGGAACCTGCCTTATGTTGGAGTGTTGAAGCCTGAATGCTACAAATAAT
TTTATCCGTCACTGGCTCTTTGACAGGGCGGTCAATAAACTTATTCTACA
AATCCAGACTCTTTGCAACTTCCACAGATTCTTGG
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