FC925015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925015 vs. ExPASy Swiss-Prot
Match: VTI13_ARATH (Vesicle transport v-SNARE 13 OS=Arabidopsis thaliana GN=VTI13 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.649e-42 Identity = 62/92 (67.39%), Postives = 80/92 (86.96%), Query Frame = 2 Query: 146 EKAELSEIKTGLDDADALIRKMDLEARSLQPSVKATLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLM 421 +K LSEIK+G+++A+AL++KMDLEAR+L P+VK++LL KLREYK+DLNN K EVKR+TSGN+N ARDELLE+GMAD + SADQR RL+M Sbjct: 34 KKQNLSEIKSGVEEAEALVKKMDLEARNLPPNVKSSLLVKLREYKSDLNNFKTEVKRITSGNLNATARDELLEAGMADTLTASADQRSRLMM 125 HSP 2 Score: 62.003 bits (149), Expect = 2.649e-42 Identity = 29/37 (78.38%), Postives = 32/37 (86.49%), Query Frame = 3 Query: 48 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQN 158 MSQ FE YERQYCE+SA LS+KCT+A ALDGE KKQN Sbjct: 1 MSQGFERYERQYCEISANLSKKCTSAIALDGEQKKQN 37
BLAST of FC925015 vs. ExPASy Swiss-Prot
Match: VTI11_ARATH (Vesicle transport v-SNARE 11 OS=Arabidopsis thaliana GN=VTI11 PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 8.270e-41 Identity = 62/92 (67.39%), Postives = 79/92 (85.87%), Query Frame = 2 Query: 146 EKAELSEIKTGLDDADALIRKMDLEARSLQPSVKATLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLM 421 +K +LSEIK+GL++A+ LIRKMDLEAR+L P++K++LL KLRE+K+DLNN K EVKR+TSG +N AARDELLE+GMAD SADQR RL+M Sbjct: 34 KKQKLSEIKSGLENAEVLIRKMDLEARTLPPNLKSSLLVKLREFKSDLNNFKTEVKRITSGQLNAAARDELLEAGMADTKTASADQRARLMM 125 HSP 2 Score: 60.4622 bits (145), Expect = 8.270e-41 Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 3 Query: 48 MSQVFEGYERQYCELSAGLSRKCTAASALDGELKKQ 155 MS VF+GYERQYCELSA LS+KC++A +LDGE KKQ Sbjct: 1 MSDVFDGYERQYCELSASLSKKCSSAISLDGEQKKQ 36
BLAST of FC925015 vs. ExPASy Swiss-Prot
Match: VTI12_ARATH (Vesicle transport v-SNARE 12 OS=Arabidopsis thaliana GN=VTI12 PE=1 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 4.734e-38 Identity = 62/92 (67.39%), Postives = 76/92 (82.61%), Query Frame = 2 Query: 146 EKAELSEIKTGLDDADALIRKMDLEARSLQPSVKATLLSKLREYKTDLNNLKNEVKRVTSGNVNQAARDELLESGMADAMMVSADQRGRLLM 421 +K +++EIK+G+D+AD LIRKMDLEARSLQPS KA LSKLREYK+DLN LK E KRV+S + ++R+EL+ESGMAD VSADQRGRL M Sbjct: 35 KKGKIAEIKSGIDEADVLIRKMDLEARSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSADAKPSSREELMESGMADLHAVSADQRGRLAM 126 HSP 2 Score: 53.1434 bits (126), Expect = 4.734e-38 Identity = 27/36 (75.00%), Postives = 29/36 (80.56%), Query Frame = 3 Query: 48 MSQVFEGYERQYCELSAGLSRKCTAASAL-DGELKK 152 MS VFEGYERQYCELS LSRKC +AS L +GE KK Sbjct: 1 MSDVFEGYERQYCELSTNLSRKCHSASVLSNGEEKK 36 The following BLAST results are available for this feature:
BLAST of FC925015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925015 ID=FC925015; Name=FC925015; organism=Citrus clementina; type=EST; length=421bpback to top |