FC925016
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925016 vs. ExPASy Swiss-Prot
Match: DIM_PEA (Cell elongation protein diminuto OS=Pisum sativum GN=DIM PE=2 SV=1) HSP 1 Score: 417.542 bits (1072), Expect = 3.700e-116 Identity = 204/238 (85.71%), Postives = 224/238 (94.12%), Query Frame = 1 Query: 31 MSDLEAPLRPKRKKGIVDFLVQFRWILVVFVVLPISVTIYFLIYLGDVKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLT 744 MSDLEAPLRPKRKK VD+ V+FRWILV+FVVLPIS T+YFL YLGDV+S+ KS+K RQKEHDENV+KVV RLK+RNPSKDGLVCTARKPW+AVGMRNVDYKRARHFEVDLS FRNILDIDK+RMIA+VEPLVNMGQI+R T PMNL+LAVVAELDDLTVGGLINGYGIEGSSH YGLFSDTVVA+EI+LADG +V+ATKDNEY DLFYAIPWSQGTLGLLV+AE+KLIPIKEYMKLT Sbjct: 1 MSDLEAPLRPKRKKIWVDYFVKFRWILVIFVVLPISFTLYFLTYLGDVRSEWKSFKTRQKEHDENVQKVVNRLKKRNPSKDGLVCTARKPWVAVGMRNVDYKRARHFEVDLSPFRNILDIDKERMIARVEPLVNMGQITRVTVPMNLALAVVAELDDLTVGGLINGYGIEGSSHKYGLFSDTVVAFEIILADGSLVKATKDNEYSDLFYAIPWSQGTLGLLVAAEVKLIPIKEYMKLT 238
BLAST of FC925016 vs. ExPASy Swiss-Prot
Match: DIM_ARATH (Cell elongation protein DIMINUTO OS=Arabidopsis thaliana GN=DIM PE=1 SV=2) HSP 1 Score: 393.275 bits (1009), Expect = 7.473e-109 Identity = 193/239 (80.75%), Postives = 219/239 (91.63%), Query Frame = 1 Query: 31 MSDLEAPL-RPKRKKGIVDFLVQFRWILVVFVVLPISVTIYFLIYLGDVKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLT 744 MSDL+ PL RPKRKK VD+ V+FRWI+V+F+VLP S T YFLIYLGD+ S+ KS++KRQKEHDENVKKV+KRLK R+ SKDGLVCTARKPWIAVGMRNVDYKRARHFEVDL FRNIL+I+K++M A+VEPLVNMGQISRAT PMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLF+DTV AYEIVLA G++VRAT+DNEY DL+YAIPWSQGTLGLLV+AEI+LI +KEYM+LT Sbjct: 1 MSDLQTPLVRPKRKKTWVDYFVKFRWIIVIFIVLPFSATFYFLIYLGDMWSESKSFEKRQKEHDENVKKVIKRLKGRDASKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLGEFRNILEINKEKMTARVEPLVNMGQISRATVPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFADTVEAYEIVLAGGELVRATRDNEYSDLYYAIPWSQGTLGLLVAAEIRLIKVKEYMRLT 239
BLAST of FC925016 vs. ExPASy Swiss-Prot
Match: DHC24_RAT (24-dehydrocholesterol reductase OS=Rattus norvegicus GN=Dhcr24 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 6.032e-42 Identity = 96/227 (42.29%), Postives = 140/227 (61.67%), Query Frame = 1 Query: 64 RKKGIVDFLVQFRWILVVFVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKL 741 R KG+ L+ RW+ V +LP+S+ Y+ V + S + ++ ++++K V+ KE+ +CT R W+ V +R YK+ H + ++ +IL++D + I +VEPLV+MGQ++ + +L V+ ELDDLTVGGLI G GIE SSH YGLF AYE++LADG VR T +E DLFYA+PWS GTLG LV+AEI++IP K+Y+KL Sbjct: 19 RVKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVQDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVSMGQVTALLNSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELILADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL 240
BLAST of FC925016 vs. ExPASy Swiss-Prot
Match: DHC24_MACFA (24-dehydrocholesterol reductase OS=Macaca fascicularis GN=DHCR24 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 6.032e-42 Identity = 97/227 (42.73%), Postives = 138/227 (60.79%), Query Frame = 1 Query: 64 RKKGIVDFLVQFRWILVVFVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKL 741 R KG+ L+ RW+ V +LP+S+ Y+ V + S + ++ +++K V+ KE+ +CT R W+ V +R YK+ H + ++ +IL++D + I +VEPLV MGQ++ + +L V+ ELDDLTVGGLI G GIE SSH YGLF AYE+VLADG VR T +E DLFYA+PWS GTLG LV+AEI++IP K+Y+KL Sbjct: 19 RVKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVLADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL 240
BLAST of FC925016 vs. ExPASy Swiss-Prot
Match: DHC24_HUMAN (24-dehydrocholesterol reductase OS=Homo sapiens GN=DHCR24 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 6.032e-42 Identity = 97/227 (42.73%), Postives = 138/227 (60.79%), Query Frame = 1 Query: 64 RKKGIVDFLVQFRWILVVFVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKL 741 R KG+ L+ RW+ V +LP+S+ Y+ V + S + ++ +++K V+ KE+ +CT R W+ V +R YK+ H + ++ +IL++D + I +VEPLV MGQ++ + +L V+ ELDDLTVGGLI G GIE SSH YGLF AYE+VLADG VR T +E DLFYA+PWS GTLG LV+AEI++IP K+Y+KL Sbjct: 19 RLKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVTMGQVTALLTSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELVLADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL 240
BLAST of FC925016 vs. ExPASy Swiss-Prot
Match: DHC24_MOUSE (24-dehydrocholesterol reductase OS=Mus musculus GN=Dhcr24 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.029e-41 Identity = 96/227 (42.29%), Postives = 139/227 (61.23%), Query Frame = 1 Query: 64 RKKGIVDFLVQFRWILVVFVVLPISVTIYFLIYLGD-VKSDMKSYKKRQKEHDENVKKVVKRLKERNPSKDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYKDLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKL 741 R KG+ L+ RW+ V +LP+S+ Y+ V + S + ++ +++K V+ KE+ +CT R W+ V +R YK+ H + ++ +IL++D + I +VEPLV+MGQ++ + +L V+ ELDDLTVGGLI G GIE SSH YGLF AYE++LADG VR T +E DLFYA+PWS GTLG LV+AEI++IP K+Y+KL Sbjct: 19 RVKGLEFVLIHQRWVFVCLFLLPLSLIFDIYYYVRAWVVFKLSSAPRLHEQRVRDIQKQVREWKEQGSKT--FMCTGRPGWLTVSLRVGKYKKT-HKNIMINLM-DILEVDTKKQIVRVEPLVSMGQVTALLNSIGWTLPVLPELDDLTVGGLIMGTGIESSSHKYGLFQHICTAYELILADGSFVRCT-PSENSDLFYAVPWSCGTLGFLVAAEIRIIPAKKYVKL 240
BLAST of FC925016 vs. ExPASy Swiss-Prot
Match: DIML_CAEEL (Diminuto-like protein OS=Caenorhabditis elegans GN=F52H2.6 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.714e-34 Identity = 89/241 (36.93%), Postives = 135/241 (56.02%), Query Frame = 1 Query: 55 RPKRKKGIVDFLV-QFRWILVVFVVLPISVTIYFLIYLGDVKSDM-KSYKKRQKEHDENVKKVVKRLKERNPS-KDGLVCTARKPWIAVGMRNVDYKRARHFEVDLSAFRNILDIDKDRMIAKVEPLVNMGQISRATCPMNLSLAVVAELDDLTVGGLINGYGIEGSSHIYGLFSDTVVAYEIVLADGQVVRATKDNEYK--------DLFYAIPWSQGTLGLLVSAEIKLIPIKEYMKLT 744 +P R + V+F++ FRW+ VV +LP+S + + D ++ + + H VK + ++LKE N + + + AR W+ + R YK ++ +ILD+D ++M K EP V MGQ+S+ +L V+ ELDDLTVGGLING G+E S YG+F YE+V++DG++ D+ K LF+AIPWSQGT+ LV+A IK+IP K+Y+KLT Sbjct: 10 KPTRWEKCVEFIMFHFRWVFVVPFLLPLS---FLFNTVFDFRNRIVHAVNSAPNAHVRKVKHIQEQLKEWNDNGRKSKLVNARPGWLTMSFRFPLYKE-NATKIATDKLFDILDLDVEKMTVKAEPGVTMGQLSQYLISRGYTLPVLPELDDLTVGGLINGCGVESGSFKYGMFQHICTGYEVVMSDGELKNVYPDSAAKTEQAKQDNSLFFAIPWSQGTICFLVAATIKIIPCKKYVKLT 246 The following BLAST results are available for this feature:
BLAST of FC925016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925016 ID=FC925016; Name=FC925016; organism=Citrus clementina; type=EST; length=745bpback to top |