FC925035

Overview
NameFC925035
Unique NameFC925035
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3323 contig Ccv1_Contig3323:385..1105. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.000e-51
Identity = 108/242 (44.63%), Postives = 155/242 (64.05%), Query Frame = 2
Query:    2 FVSHDAQFHVLVNGYVVLSNFNVGNIISSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTA-KFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASI-PNLNMTCEFPVID-GYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFV 718
            F    A+F VL+NG+ V+++F+  +++    V E++++I+   L I+FLP   S F FVNA+E+ SAPKD I+D   K V  +    F  L+ Q LE ++R+NVGG K+TPFNDTLWRTW+ DD +L     ++R ++T    YQ+GGA+ EI PDNVY TA+ +   N  +    N++  F V +    +LV LHFCDI S SL  L+FNV++NE L +KD DLS +  + L+SP Y DFV
Sbjct:  119 FNLRSAKFRVLINGFSVINSFSTSSVV----VKEFILKIDDPVLEISFLPFKASGFGFVNAVEVFSAPKDYIMDQGTKLVIPNSAQIFSNLSSQVLETVHRINVGGSKLTPFNDTLWRTWVVDDNYLLLRAAARRAWTTHSPNYQNGGATREIAPDNVYMTAQEMDRDNQELQARFNISWGFQVDEKRVLHLVRLHFCDIVSSSLNQLYFNVFINEYLAFKDVDLSTLTFHVLASPLYIDFV 356          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 103/245 (42.04%), Postives = 136/245 (55.51%), Query Frame = 2
Query:    2 FVSHDAQFHVLVNGYVVLSNFNVGNIISSASV---NEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILD--TAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLNMTCEFPVIDGYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFVV 721
            F    A F VL   YV+L NF + N  + +      EYL+ +   +  + F P MKS  AF+NAIE++SAP +LI D  TA F     +  F  L+  A + +YRVNVGGP + P NDTL RTW+PD EFLK    +K V +T          +  I P  VY TA  +A +    PN N++  FP    + YL+ LHFCDI S SL  L+FNVY+N        DLS VAG +L++P+Y D VV
Sbjct:  143 FDLQQATFSVLTEKYVLLHNFKISNNNNDSQAAVQKEYLVNMTDAQFALRFRP-MKSSAAFINAIEVVSAPDELISDSGTALF----PVIGFSGLSDYAYQSVYRVNVGGPLIMPQNDTLGRTWIPDKEFLKDENLAKDVKTTPSAIKYPPEVTPLIAPQTVYATAVEMANSLTIDPNFNVSWNFPSNPSFNYLIRLHFCDIVSKSLNDLYFNVYINGKTAISGLDLSTVAG-NLAAPYYKDIVV 381          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y2214_ARATH (Probable receptor-like protein kinase At2g21480 OS=Arabidopsis thaliana GN=At2g21480 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.190e-41
Identity = 99/243 (40.74%), Postives = 130/243 (53.50%), Query Frame = 2
Query:    2 FVSHDAQFHVLVNGYVVLSNFNVGNIISSASVN---EYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLNMTCEFPVIDGYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFVV 721
            F    A F VL   YV+L NF + N  + +      EYL+ +   +  + F P MK   AF+N IEL+SAP +LI D    +    ++ F  L+  A + +YRVNVGGP +TP NDTL RTW PD E+LK    +K V +         G +  I P  VY T   +A +    PN N+T  FP    + Y + LHFCDI S SL  L+FNVY+N        DLS VAG  LS+P+Y D VV
Sbjct:  142 FDLQQATFSVLTEKYVLLHNFKLSNDNNDSQATVQKEYLLNMTDAQFALRFKP-MKGSAAFINGIELVSAPDELISDAGTSLF--PVNGFSGLSDYAYQSVYRVNVGGPLITPQNDTLGRTWTPDKEYLKDENLAKDVKTNPTAIIYPPGVTPLIAPQTVYATGAEMADSQTIDPNFNVTWNFPSNPSFHYFIRLHFCDIISKSLNDLYFNVYINGKTAISGLDLSTVAG-DLSAPYYKDIVV 380          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 91/234 (38.89%), Postives = 126/234 (53.85%), Query Frame = 2
Query:   17 AQFHVLVNGYVVLSNFNVGNIISSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLNMTCEFPVIDGYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFV 718
            A+F V    +V+LS+F V    SS  + EY + +  + L +TF P+  S FAF+NA+E++S P  L      F        F  L+ QALE +YRVN+GGP+VTP NDTL R W PD EFL      K V       Y  G A+ E  P  VY T   + + +    N N+T +F V  G++Y +  HFCDI S +L  L+FN+YV+     ++ DLS     +LS  +  DFV
Sbjct:  117 AKFSVSSETHVLLSDFTV----SSRVMKEYSLNVATDHLELTFTPSGDS-FAFLNALEVVSVPDTLFSGDPSFAGSP--GKFQGLSWQALETVYRVNMGGPRVTPSNDTLSRIWEPDSEFLVEKNLVKSVSKIASVDYVPGFATEETAPRTVYGTCTEMNSADNPSSNFNVTWDFDVDPGFQYFLRFHFCDIVSKALNQLYFNLYVDSMDVVENLDLSSYLSNTLSGAYAMDFV 343          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.308e-35
Identity = 92/239 (38.49%), Postives = 129/239 (53.97%), Query Frame = 2
Query:    2 FVSHDAQFHVLVNGYVVLSNFNVGNIISSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLNMTCEFPVIDGYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFV 718
            F    A+F V    +V+LS+F V    SS  V EY + +    L +TF P+  S FAFVNAIE+IS P  LI  + +FV       F  ++ Q LE I+RVN+GGP V   NDTL RTW+PD EFL     +K +       +  G A+ +  P  VY +   + + +      N+T EF V  G++Y    HFCDI S+SL  L+FN+YV+  +   D DLS +   +L+  +  DFV
Sbjct:  112 FKMGSAKFAVSSQSHVLLSDFTV---TSSKVVKEYSLNVTTNDLVLTFTPSSGS-FAFVNAIEVISIPDTLITGSPRFVGNPA--QFPDMSMQGLETIHRVNMGGPLVASNNDTLTRTWVPDSEFLLEKNLAKSMSKFSTVNFVPGYATEDSAPRTVYGSCTEMNSADNPNSIFNVTWEFDVDPGFQYYFRFHFCDIVSLSLNQLYFNLYVDSMVAATDIDLSTLVDNTLAGAYSMDFV 344          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34
Identity = 92/234 (39.32%), Postives = 133/234 (56.84%), Query Frame = 2
Query:   23 FHVLVNGYVVLSNFNVGNIISSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLPDDEFLKSSEGSKRV-YSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLNMTCEFPVIDGYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFVV 721
            F V  +  V+L +F+ G+  SS    EYLI   AEKL + F P  K   AF+NA+E++S P +L+ D+A  V   +  +F  L+  +LEI++R+N+GG  ++P  D L RTWL D  +    EGS+ V        Y  GGA+  I P+ VY TA  +A    S PN N++    V  G++Y + LHFCDI S SL  L FNV++N+       DLS +   +L + +YADFV+
Sbjct:  131 FSVTTDTTVLLHDFSAGDT-SSIVFKEYLIYA-AEKLSLYFKPH-KGSTAFINAVEIVSVPDELVPDSASSVP--QAPDFKGLSSFSLEILHRINIGGDLISPKIDPLSRTWLSDKPYNTFPEGSRNVTVDPSTITYPDGGATALIAPNPVYATAEEMADAQTSQPNFNLSWRMSVDFGHDYFIRLHFCDIVSKSLNDLIFNVFINKLSAISALDLSSLTS-ALGTAYYADFVL 358          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.160e-33
Identity = 84/234 (35.90%), Postives = 125/234 (53.42%), Query Frame = 2
Query:   17 AQFHVLVNGYVVLSNFNVGNIISSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLNMTCEFPVIDGYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFV 718
            A   V+   +V+L+NF+  N   S    EY + + +E L ++F+P+  S   FVNAIE++S P +LI D A  +       F  L+  A E +YR+N+GGP +T  NDTL R W  D E+L  +     V +   +   S   + E  P+ VY TA  +   N + P+ N+T   PV   + Y V +HFCDI S +L  L FN+YVN++L     DLS +    L  P++ DF+
Sbjct:  122 ASITVVTEDFVLLNNFSFNNFNGSYIFKEYTVNVTSEFLTLSFIPSNNS-VVFVNAIEVVSVPDNLIPDQALALNPST--PFSGLSLLAFETVYRLNMGGPLLTSQNDTLGRQWDNDAEYLHVNSSVLVVTANPSSIKYSPSVTQETAPNMVYATADTMGDANVASPSFNVTWVLPVDPDFRYFVRVHFCDIVSQALNTLVFNLYVNDDLALGSLDLSTLTN-GLKVPYFKDFI 351          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.188e-23
Identity = 80/228 (35.09%), Postives = 121/228 (53.07%), Query Frame = 2
Query:   53 LSNFNVGNIISSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDTLWRTWLP-DDEFLKSSEGSKRVYSTGKNWYQSG--GASHEIGPDNVYNTARVI-AATNASIPNL-NMTCEFPVIDGYEYLVTLHFCDIAS-ISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFV 718
            L +F+  N+ ++  V E+L+ +N+ +  I F+P   S  A +NAIE+ SAP DL + +A              + + L  IYR+NVGG K+TP NDTL RTWLP DD+FL   + ++ + ST    Y  G   A+    PD VY TA+ +  ++N  +  L N+T  F V   + + + +HF DI S +S     F ++VN    Y   D+       L+SPF+ D V
Sbjct:  142 LKSFSPQNLTNTPRVEEFLLMMNSLEFEIRFVPD-HSSLALINAIEVFSAPDDLEIPSA--------------SDKNLHTIYRLNVGGEKITPDNDTLGRTWLPDDDDFLYRKDSARNINSTQTPNYVGGLSSATDSTAPDFVYKTAKAMNRSSNEQVGMLMNVTWSFKVKSNHRHFIRIHFSDILSNLSNSDSDFYLFVN---GYWRVDVKPSEQPRLASPFFKDVV 351          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21
Identity = 70/252 (27.78%), Postives = 120/252 (47.62%), Query Frame = 2
Query:   11 HDAQFHVLVNGYVVLSNFNVG---------------NIISSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLILDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDT-LWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLNMTCEFPVIDGYEYLVTLHFCDIASISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFV 718
            +++ F V  +G  ++ + N+                N  +S+ V E+L+     KL ++F+P  K  F FVNAIE++S    L  ++   V G +++    L  + +E +YR+NVGGPK+ P  D  L+RTW  D  ++        V ++    Y     S  + P  VY TAR+++ T       N++ +F V   ++YLV LHFC++         F +Y+N      + D+   AG   +   Y D++
Sbjct:  122 NESSFSVFADGLRLMLDINIAGEIAHKNLILESTGHNATASSLVKEFLLPTGPGKLVLSFIPE-KGSFGFVNAIEIVSVDDKLFKESVTKVGGSEVEL--GLGGRGIETMYRLNVGGPKLGPSKDLKLYRTWETDLSYMVIENAGVEVKNSSNITYALADDS-PVAPLLVYETARMMSNTEVLEKRFNISWKFEVDPNFDYLVRLHFCELLVDKQNQRIFRIYINNQTAAGNFDIFAHAG-GKNKGIYQDYL 368          
BLAST of FC925035 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 79/244 (32.38%), Postives = 119/244 (48.77%), Query Frame = 2
Query:   23 FHVLVNGYVVLSNFNVGNII--SSASVNEYLIRINAEKLGITFLPTMKSKFAFVNAIELISAPKDLI----LDTAKFVTGDKIDNFDALNKQALEIIYRVNVGGPKVTPFNDT-LWRTWLPDDEFLKSSEGSKRVYSTGKNWYQSGGASHEIGPDNVYNTARVIAATNASIPNLN--MTCEFPVIDGYEYLVTLHFCDIAS--ISLGLLFFNVYVNENLPYKD*DLSIVAGYSLSSPFYADFVV 721
            F V VN + +L NF+V   I  SS+ + E+++ +N + L +TF P+  S  AFVN IE+IS P         D      G  +D F+  N  A E +YRVNVGG  V    D+ ++R WL D+ FL           TG     +      + P++VY T R++   ++   NLN  +T  F V  G+ Y+V LHFC+        G   F+++    L  ++ D+  ++G     P Y DF V
Sbjct:  124 FSVNVNRFTLLHNFSVKASIPESSSLIKEFIVPVN-QTLDLTFTPSPNS-LAFVNGIEIISMPDRFYSKGGFDDVVRNVGRDVD-FEIDNSTAFETVYRVNVGGKVVGDVGDSGMFRRWLSDEGFLLGINSGAIPNITGVKINYTDKTPAYVAPEDVYTTCRLMGNKDSPELNLNFNLTWLFEVDAGFAYIVRLHFCETQPEVNKTGDRVFSIFFGYQLAMREMDVFRLSG-GFRLPMYLDFKV 363          
The following BLAST results are available for this feature:
BLAST of FC925035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
Y5241_ARATH3.000e-5144.63Probable receptor-like protein kinase At5g24010 OS... [more]
Y4391_ARATH6.271e-4142.04Probable receptor-like protein kinase At4g39110 OS... [more]
Y2214_ARATH8.190e-4140.74Probable receptor-like protein kinase At2g21480 OS... [more]
Y5597_ARATH1.036e-3538.89Probable receptor-like protein kinase At5g59700 OS... [more]
HERK_ARATH2.308e-3538.49Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5613_ARATH5.685e-3439.32Probable receptor-like protein kinase At5g61350 OS... [more]
THE1_ARATH2.160e-3335.90Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
Y2232_ARATH1.188e-2335.09Probable receptor-like protein kinase At2g23200 OS... [more]
Y1357_ARATH3.236e-2127.78Probable receptor-like protein kinase At1g30570 OS... [more]
Y5389_ARATH2.739e-2032.38Probable receptor-like protein kinase At5g38990 OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB05FM1 TF Citrus clementina cDNA clone KN0AAP8YB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925035 ID=FC925035; Name=FC925035; organism=Citrus clementina; type=EST; length=721bp
ATTTGTTTCACATGATGCTCAATTTCACGTTTTGGTTAATGGATATGTTG
TTTTGAGCAATTTTAATGTTGGTAATATAATTTCAAGTGCTAGTGTTAAC
GAGTATCTTATCAGGATTAATGCTGAAAAACTTGGAATTACGTTTTTGCC
CACTATGAAATCAAAATTTGCATTTGTTAATGCCATTGAACTGATATCCG
CACCTAAAGATTTGATTTTGGATACTGCCAAGTTTGTCACTGGCGATAAA
ATTGACAACTTTGATGCGCTAAATAAACAAGCGCTTGAAATTATATATAG
GGTCAATGTGGGTGGTCCAAAAGTGACACCATTTAATGATACTTTGTGGA
GGACATGGTTACCTGATGATGAATTCCTCAAATCTAGTGAGGGATCAAAA
AGGGTGTATTCTACTGGTAAGAACTGGTATCAGAGTGGAGGGGCAAGCCA
TGAAATTGGTCCTGATAATGTTTATAACACTGCCCGGGTGATTGCTGCCA
CGAATGCTTCAATTCCTAATTTGAATATGACGTGTGAGTTTCCAGTGATT
GACGGTTACGAGTATCTTGTTACGTTGCATTTTTGTGATATTGCAAGTAT
TTCTCTTGGTTTGCTGTTTTTCAATGTGTATGTAAATGAGAACTTACCAT
ACAAAGATTAGGATCTCTCCATTGTTGCTGGTTATTCATTGTCTTCTCCG
TTTTATGCCGACTTTGTGGTT
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