FC925076
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP1B1_MOUSE (AP-1 complex subunit beta-1 OS=Mus musculus GN=Ap1b1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29 Identity = 77/189 (40.74%), Postives = 108/189 (57.14%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T+Q G I L N + + F IQFN+N+FGLA A PLQV + P + LP+ ++ + P + LQVAVKN+ V+YF+ PLHV F EDG+M+R FL TW+ + + NE D +N+ EA ++L +SN+F +AKR Q++ Y S KL G Sbjct: 716 PKAVWLPAMKAKGLEISGTFTRQAGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHVPLSPNQTVEISLPLNTVGSVLKMEPLNNLQVAVKNNID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIANENEAQFQIRDCPLNT-EAASNKLQSSNIFTVAKRNVEGQDMLYQSLKLTNG 902
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP1B1_HUMAN (AP-1 complex subunit beta-1 OS=Homo sapiens GN=AP1B1 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29 Identity = 76/189 (40.21%), Postives = 107/189 (56.61%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T+Q G I L N + + F IQFN+N+FGLA A PLQV + P + LP+ ++ + P + LQVAVKN+ V+YF+ PLH+ F EDG+M+R FL TW+ + + NE D +N+ EA +L +SN+F +AKR Q++ Y S KL G Sbjct: 719 PKAVWLPAMKAKGLEISGTFTRQVGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLSTVGSVMKMEPLNNLQVAVKNNID-VFYFSTLYPLHILFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCPLNA-EAASSKLQSSNIFTVAKRNVEGQDMLYQSLKLTNG 905
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP1B1_RAT (AP-1 complex subunit beta-1 OS=Rattus norvegicus GN=Ap1b1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.765e-29 Identity = 77/189 (40.74%), Postives = 107/189 (56.61%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T+Q G I L N + + F IQFN+N+FGLA A PLQV + P + LP+ ++ + P + LQVAVKN+ V+YF+ PLHV F EDG+M+R FL TW+ + + NE D +N+ EA +L +SN+F +AKR Q++ Y S KL G Sbjct: 722 PKAVWLPAMKAKGLEISGTFTRQVGSISMDLQLTNKALQVMTDFAIQFNRNSFGLAPAAPLQVHAPLSPNQTVEISLPLNTVGSVMKMEPLNNLQVAVKNNID-VFYFSTLYPLHVLFVEDGKMDRQMFLATWKDIPNENEAQFQIRDCPLNT-EAASSKLQSSNIFTVAKRTVEGQDMLYQSLKLTNG 908
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP2B1_RAT (AP-2 complex subunit beta OS=Rattus norvegicus GN=Ap2b1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26 Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T + G IY ++F N + + F IQFNKN+FG+ + PL + + P S LP+ + + P + LQVAVKN+ V+YF+ PL+V F EDG+MER FL TW+ + + NE+ + +N+ + +L +N++ IAKR Q++ Y S KL G Sbjct: 710 PKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNA-DTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNG 896
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP2B1_MOUSE (AP-2 complex subunit beta OS=Mus musculus GN=Ap2b1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26 Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T + G IY ++F N + + F IQFNKN+FG+ + PL + + P S LP+ + + P + LQVAVKN+ V+YF+ PL+V F EDG+MER FL TW+ + + NE+ + +N+ + +L +N++ IAKR Q++ Y S KL G Sbjct: 710 PKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNA-DTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNG 896
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP2B1_HUMAN (AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26 Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T + G IY ++F N + + F IQFNKN+FG+ + PL + + P S LP+ + + P + LQVAVKN+ V+YF+ PL+V F EDG+MER FL TW+ + + NE+ + +N+ + +L +N++ IAKR Q++ Y S KL G Sbjct: 710 PKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNA-DTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNG 896
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP2B1_BOVIN (AP-2 complex subunit beta OS=Bos taurus GN=AP2B1 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26 Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T + G IY ++F N + + F IQFNKN+FG+ + PL + + P S LP+ + + P + LQVAVKN+ V+YF+ PL+V F EDG+MER FL TW+ + + NE+ + +N+ + +L +N++ IAKR Q++ Y S KL G Sbjct: 710 PKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNA-DTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNG 896
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP1B1_BOVIN (AP-1 complex subunit beta-1 OS=Bos taurus GN=AP2B1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.410e-26 Identity = 70/189 (37.04%), Postives = 105/189 (55.56%), Query Frame = -1 Query: 6 PLPVVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGPLQV-PQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVKNSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKDFPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAKLPRG 569 P V LPA +GL+IS T + G IY ++F N + + F IQFNKN+FG+ + PL + + P S LP+ + + P + LQVAVKN+ V+YF+ PL+V F EDG+MER FL TW+ + + NE+ + +N+ + +L +N++ IAKR Q++ Y S KL G Sbjct: 724 PKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLGPVMKMEPLNNLQVAVKNNID-VFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNA-DTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNG 910
BLAST of FC925076 vs. ExPASy Swiss-Prot
Match: AP1B_DICDI (AP-1 complex subunit beta OS=Dictyostelium discoideum GN=ap1b1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.712e-16 Identity = 59/187 (31.55%), Postives = 97/187 (51.87%), Query Frame = -1 Query: 18 VVLPASTGQGLQISAQLTQQDGQIYYSLSFENNSQIPLDGFMIQFNKNTFGLAAAGP-LQVPQVQPGTSASTLLPMVMFQNLSQGPPSSLLQVAVK-NSQQPVWYFNDKAPLHVFFTEDGRMERGNFLETWRSLHDSNEVSKD----FPDIVVNSVEATLDRLDASNMFFIAKRKHAKQEVFYFSAK 560 VV Q +QIS T+ G+I L+ N SQ + F IQF +N+FG++ A L ++ G S +P+ +S P + ++ +A+ Q +YF PL TE GR++R ++L W+S+ +SNE S + P + V+S+ L RL++ N+F I ++K QE+ + S K Sbjct: 713 VVFGGDRSQAIQISGAFTRFQGRINLELNLLNTSQQGMSKFKIQFYQNSFGISPADQILSCGAIEVGQSTDVTIPISCNGQIS-NPLNPVIDMAMMVLPSQERFYFKMNFPLLCLLTETGRLDRESYLSMWKSIPESNERSVEIQVRLPHVDVDSI---LRRLNSKNIFEIVRKKAPNQEISFLSCK 895 The following BLAST results are available for this feature:
BLAST of FC925076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925076 ID=FC925076; Name=FC925076; organism=Citrus clementina; type=EST; length=776bpback to top |