FC925103

Overview
NameFC925103
Unique NameFC925103
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13923 contig Ccv1_Contig13923:64..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21
Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSE-KAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFIGQNLFT 583
            TKIV TLGP SR+V ++   L+AGM+VARF FS G  EYHQETL+NLK A++ T+ LCAVMLDT GPE++    ++ K I L     + ++ D   +   +++ +++  L   LK G+TI       T
Sbjct:   22 TKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCADGTIT 149          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21
Identity = 59/128 (46.09%), Postives = 76/128 (59.38%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFIGQNLFT 583
            TKIV TLGP SRSV++    L+AGM+VARF FS G  +YHQETL NLK A+  T  LCAVMLDT GPE++    K  K I L     V +T D   +   +++ +++  L   LK G+TI       T
Sbjct:   23 TKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTILCSDGTIT 150          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.932e-20
Identity = 56/130 (43.08%), Postives = 80/130 (61.54%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFI--GQNLFT 583
            TKIV TLGP SRSV +I   L+AGM+VARF FS G+ +YHQET++NL+ A+++T  LCAVMLDT GPE++    K  K + L     + ++ D   +    ++ +++  LA  +K    I    GQ  FT
Sbjct:   20 TKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVILCADGQITFT 149          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.012e-19
Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTI 559
            TKIV TLGP SRSV ++   L AGMSVARF FS G+ EYHQETL+NL+ A+  T  LCAVMLDT GPE++    K  K I L     + ++ D   +   + + +++  LA  +  G  I
Sbjct:    9 TKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVI 128          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYK_DICDI (Pyruvate kinase OS=Dictyostelium discoideum GN=pyk PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15
Identity = 42/129 (32.56%), Postives = 76/129 (58.91%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKA--ISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFIGQNLFT 583
            TKIV T+GPK+ S + +   ++ GM+V R  FS G  +YH + ++N+++A++ T K+ A+MLDT GPE++     ++   + L     +++  +  Q  TS  + I++ GL +S+K G  I I   + +
Sbjct:   22 TKIVCTIGPKTMSEEALIKLIETGMNVCRLNFSHGTHDYHGQVIKNVRSAMEKTGKIIAIMLDTKGPEIRTGKIEDRCGYVDLFVGQEILVDTNMNQPGTSFRISIDYKGLLDSVKVGGYILIADGVIS 150          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 41/126 (32.54%), Postives = 72/126 (57.14%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFIGQNL 577
            TKIV T+GPK+ S +++S  L AGM+V R  FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SL A  +   T D      ++++ + ++G  + L  G+T+ +   L
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL 129          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.368e-15
Identity = 41/126 (32.54%), Postives = 72/126 (57.14%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFIGQNL 577
            TKIV T+GPK+ S +++S  L AGM+V R  FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SL A  +   T D      ++++ + ++G  + L  G+T+ +   L
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL 129          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 41/126 (32.54%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFIGQNL 577
            TKIV T+GPK+ S ++++  L AGM+V R  FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SL A  +   T D      S+++ + ++G    L  G+T+ +   L
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL 129          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.280e-14
Identity = 41/126 (32.54%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  203 TKIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLMADGSVVLTPDCGQEATSQVLPINFDGLANSLKKGDTIFIGQNL 577
            TKIV T+GPK+ S ++++  L AGM+V R  FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SL A  +   T D      S+++ + ++G    L  G+T+ +   L
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL 129          
BLAST of FC925103 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.672e-14
Identity = 43/128 (33.59%), Postives = 71/128 (55.47%), Query Frame = 2
Query:  206 KIVGTLGPKSRSVDVISGCLKAGMSVARFYFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLMADGSVVLTPDCGQE--ATSQVLPINFDGLANSLKKGDTIFIGQNLFT 583
            +IV T+GP ++SV+ +   +K+GMSVAR  FS G+ EYHQ T+ N++AA         + LDT GPE++     +  +S      V +T D   E   T +   I++  L N+++ G +I++   + T
Sbjct:   23 RIVCTIGPSTQSVEALKNLMKSGMSVARMNFSHGSHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGEVSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMT 150          
The following BLAST results are available for this feature:
BLAST of FC925103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
KPYC_SOLTU1.844e-2143.75Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_SOYBN2.408e-2146.09Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_TOBAC5.932e-2043.08Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH1.012e-1945.83Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYK_DICDI1.512e-1532.56Pyruvate kinase OS=Dictyostelium discoideum GN=pyk... [more]
KPYK1_SALTY3.368e-1532.54Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI3.368e-1532.54Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK1_ECOLI1.280e-1432.54Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO571.280e-1432.54Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK1_TRYBB1.672e-1433.59Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YB10FM1 TF Citrus clementina cDNA clone KN0AAP3YB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925103 ID=FC925103; Name=FC925103; organism=Citrus clementina; type=EST; length=616bp
TATTATTCATCTTATAAACAATAAAATTCAAAACTCTCTAATCAACGCTA
ACCGCTGCCTCATTCATCTCTCGTACTCTCTCTGTATCTCTCTGTATCTC
TCTGTTCAGTGAAAGATGCATTCAAGTCACTTGCTTCTCGAGGAGCCAAT
CAGGATGGCTTCAATCCTGGAGCCATCCAAAGCCTTTTTCTTCCCGGCAA
TGACCAAAATTGTCGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTT
ATATCCGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCTATTTCTC
GTGGGGTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGG
CAGTTAAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGT
CCCGAATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTATGGC
AGATGGTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACCTCTC
AAGTTTTGCCCATCAATTTCGATGGACTTGCTAATTCATTGAAGAAAGGA
GACACCATTTTTATCGGTCAAAACTTGTTCACTGGAAATTGAGAATACTT
CTGTGTGGCTGGAGGT
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