FC925104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT12_ARATH (Cyclin-T1-2 OS=Arabidopsis thaliana GN=CYCT1-2 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.576e-19 Identity = 48/76 (63.16%), Postives = 57/76 (75.00%), Query Frame = 1 Query: 538 SKLEDDE--PVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 S L DDE P F SR+EIER SPSR+DGID ET LR SYC F++ LG RL++PQ TI TA+ CHRFF+R+SHA Sbjct: 21 SNLHDDEIIPWFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFFLRQSHA 96
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT13_ARATH (Cyclin-T1-3 OS=Arabidopsis thaliana GN=CYCT1-3 PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19 Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 + SR+EIERFSPSRKDGID ++E+ LR SYC F+Q LG++L + Q TI AMV+CHRF++R+SHA Sbjct: 35 YFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHRFYMRQSHA 99
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT15_ARATH (Cyclin-T1-5 OS=Arabidopsis thaliana GN=CYCT1-5 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.670e-18 Identity = 44/86 (51.16%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 502 EVSTSMSCKRDRSKLEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 E S + K E+ + R EIE SPSR DGID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF R+SHA Sbjct: 13 ESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHA 98
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT11_ORYSJ (Cyclin-T1-1 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.848e-18 Identity = 39/65 (60.00%), Postives = 56/65 (86.15%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 +++RDE+ER SPSR+DG+ A +E LR +YC+FI+++GLRL+LPQ TI TA +LCHRF++R+SHA Sbjct: 10 YVTRDEVERGSPSRRDGVGAAKEAELRATYCSFIRDVGLRLQLPQVTIATATLLCHRFYLRQSHA 74
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT14_ORYSJ (Cyclin-T1-4 OS=Oryza sativa subsp. japonica GN=CYCT1-1 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 40/65 (61.54%), Postives = 54/65 (83.08%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 + SR EIE SPSR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRF++R+SHA Sbjct: 37 YFSRKEIEENSPSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHA 101
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT14_ARATH (Cyclin-T1-4 OS=Arabidopsis thaliana GN=CYCT1-4 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.082e-17 Identity = 42/86 (48.84%), Postives = 57/86 (66.28%), Query Frame = 1 Query: 502 EVSTSMSCKRDRSKLEDDEPVFMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 E S + K ++ + R EIE SPSR D ID +ET+LR SYC F+Q+LG+RL++PQ TI TA++ CHRFF+R+SHA Sbjct: 13 ESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHA 98
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT13_ORYSJ (Cyclin-T1-3 OS=Oryza sativa subsp. japonica GN=CYCT1-3 PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.149e-17 Identity = 40/65 (61.54%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 + SR EIE S SR+DGID +E++LR SYC F+Q+LG+RL++PQ TI TA+V CHRFF+R+SHA Sbjct: 38 YFSRKEIEENSLSRRDGIDLKKESYLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFFLRQSHA 102
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT12_ORYSJ (Cyclin-T1-2 OS=Oryza sativa subsp. japonica GN=CYCT1_2 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15 Identity = 34/65 (52.31%), Postives = 53/65 (81.54%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRSHA 759 + +R+E+E+FSPSRKDGI + E+ +R YC+FI+++G+RL+LPQ TI TA++ CHRF++ +S A Sbjct: 19 YFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLA 83
BLAST of FC925104 vs. ExPASy Swiss-Prot
Match: CCT11_ARATH (Putative cyclin-T1-1 OS=Arabidopsis thaliana GN=CYCT1-1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.984e-12 Identity = 35/63 (55.56%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 565 FMSRDEIERFSPSRKDGIDALRETHLRYSYCAFIQNLGLRLELPQTTIGTAMVLCHRFFVRRS 753 + +R+ IE+ SPSR DGI+ ET R+SY +F+Q LG RL PQ TI TA+VLC RFF R+S Sbjct: 8 YNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFFTRQS 70 The following BLAST results are available for this feature:
BLAST of FC925104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925104 ID=FC925104; Name=FC925104; organism=Citrus clementina; type=EST; length=764bpback to top |