FC925113
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_CUCSA (Photosystem I reaction center subunit XI, chloroplastic OS=Cucumis sativus GN=PSAL PE=2 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.021e-50 Identity = 95/127 (74.80%), Postives = 113/127 (88.98%), Query Frame = 1 Query: 7 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNT 387 MA+ +SP ASQL SSF S +R+L++P+G+S SP R +P+ R+ F ++AIQ++KPT+QVIQPINGDPFIGSLETP+TSSPLIAWYLSNLPAYRTAVSPLLRG+EVGLAHGF LVGPFVKAGPLRNT Sbjct: 1 MATATSPTASQLSSSFASSNTRALISPKGLSASPLRRIPT-RTHSFTIRAIQADKPTFQVIQPINGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFFLVGPFVKAGPLRNT 126
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_ARATH (Photosystem I reaction center subunit XI, chloroplastic OS=Arabidopsis thaliana GN=PSAL PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 6.730e-50 Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 1 Query: 7 MASVSSPMASQLKSSFTSP-VSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNT 387 MA+ +SPMASQL+SSF+S +S+ L P+GISG+PF V P+KR F V+A++S+K T+QV+QPINGDPFIGSLETP+TSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGF LVGPFVKAGPLRNT Sbjct: 1 MAASASPMASQLRSSFSSASLSQRLAVPKGISGAPFGVSPTKRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWYLSNLPGYRTAVNPLLRGVEVGLAHGFFLVGPFVKAGPLRNT 128
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_SPIOL (Photosystem I reaction center subunit XI, chloroplastic OS=Spinacia oleracea GN=PSAL PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 1.958e-49 Identity = 98/129 (75.97%), Postives = 112/129 (86.82%), Query Frame = 1 Query: 7 MASVSSPMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPS-KRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTE 390 MA+ +SPMASQLKS FT+ ++L+ P+GISG R PS +R F V+AI++EKPTYQVIQP+NGDPFIG LETP+TSSPLIAWYLSNLPAYRTAV+PLLRGVEVGLAHGFLLVGPFVKAGPLRNTE Sbjct: 1 MAATTSPMASQLKSGFTT---KALVVPKGISGPALRGFPSPRRHTSFTVRAIKTEKPTYQVIQPLNGDPFIGGLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTE 126
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_HORVU (Photosystem I reaction center subunit XI, chloroplastic OS=Hordeum vulgare GN=PSAL PE=1 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 3.955e-42 Identity = 84/123 (68.29%), Postives = 98/123 (79.67%), Query Frame = 1 Query: 25 PMASQLKSSFTSPVSRSLLTPRGISGSPFRVVPSKRSPRFIVKAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEI 393 PMASQ+ S + PRG+SG+ R PRF+VKA++S+KPTYQV+QPINGDPFIGSLETP+TSSPL+AWYLSNLPAYRTAVSPLLRG+EVGLAHG+LLVGPF GPLRNT + Sbjct: 8 PMASQVMKS-----GLACSKPRGMSGASLT-----RRPRFVVKAVKSDKPTYQVVQPINGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFALTGPLRNTPV 120
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_GUITH (Photosystem I reaction center subunit XI OS=Guillardia theta GN=psaL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.120e-20 Identity = 43/71 (60.56%), Postives = 55/71 (77.46%), Query Frame = 1 Query: 181 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEI 393 Q ++P N DPF+G+L TPIT+S LSNLPAYR +SPLLRG+E+G+ HG+ LVGPF K GPLRN+E+ Sbjct: 3 QFVKPYNDDPFVGNLATPITTSSFTRTLLSNLPAYRAGLSPLLRGLEIGMTHGYFLVGPFYKLGPLRNSEV 73
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_THEEB (Photosystem I reaction center subunit XI OS=Thermosynechococcus elongatus (strain BP-1) GN=psaL PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.910e-20 Identity = 39/71 (54.93%), Postives = 59/71 (83.10%), Query Frame = 1 Query: 181 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEI 393 ++++P NGDPF+G L TPI+ S L+ ++ NLPAYR +SP+LRG+EVG+AHG+ L+GP+VK GPLR++++ Sbjct: 4 ELVKPYNGDPFVGHLSTPISDSGLVKTFIGNLPAYRQGLSPILRGLEVGMAHGYFLIGPWVKLGPLRDSDV 74
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_CYAME (Photosystem I reaction center subunit XI OS=Cyanidioschyzon merolae GN=psaL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.910e-20 Identity = 44/69 (63.77%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 187 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEI 393 I+P N DPF+G L TPI SS L YLS LP YR VSP LRG+E+G+AHG+ L+GPFV+ GPLRNT+I Sbjct: 5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDI 73
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_CYACA (Photosystem I reaction center subunit XI OS=Cyanidium caldarium GN=psaL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.910e-20 Identity = 39/69 (56.52%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 187 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEI 393 I+P +PF+G+L TP+ SS + WYL NLP YR +SPLLRG+E+G+AHG+ ++GPF K GPLRNT++ Sbjct: 5 IKPYGSNPFVGNLSTPVNSSKVTIWYLKNLPIYRRGLSPLLRGLEIGMAHGYFIIGPFYKLGPLRNTDL 73
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_ODOSI (Photosystem I reaction center subunit XI OS=Odontella sinensis GN=psaL PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.258e-20 Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 187 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEI 393 I+P N DPF+G L TPITSS + L NLPAYR ++PLLRG+E+GLAHG+ L+GPFVK GPLRN++I Sbjct: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLGPLRNSDI 73
BLAST of FC925113 vs. ExPASy Swiss-Prot
Match: PSAL_PHATR (Photosystem I reaction center subunit XI OS=Phaeodactylum tricornutum GN=psaL PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.258e-20 Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 187 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEI 393 I+P N DPF+G L TPITSS + L NLPAYR ++PLLRG+E+GLAHG+ L+GPFVK GPLR++EI Sbjct: 5 IKPYNDDPFVGHLATPITSSAVTRAILQNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLGPLRDSEI 73 The following BLAST results are available for this feature:
BLAST of FC925113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925113 ID=FC925113; Name=FC925113; organism=Citrus clementina; type=EST; length=430bpback to top |