FC925115

Overview
NameFC925115
Unique NameFC925115
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3765 contig Ccv1_Contig3765:1..663. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.825e-50
Identity = 98/161 (60.87%), Postives = 113/161 (70.19%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MSLIP+FFG RR++V +PFSLDVWDPF+DFPFP+  S A   +F  E SA V+ RVDWKETPEAHVFKAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSASFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 161          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.085e-49
Identity = 98/161 (60.87%), Postives = 112/161 (69.57%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MSLIPSFFG RRS+V +PFSLDVWDPF+DFPF +    ALS+ FP E SA V+ RVDWKETPEAHVFKADLPG+              LQISG+R +EKEDKND WHR+ERSSG F RRFRLPEN KMDQ+KA+ME+G                  I+ISG
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNS---ALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDISG 158          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.648e-48
Identity = 99/161 (61.49%), Postives = 109/161 (67.70%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MSLIPSFFG RRSSV +PFSLDVWDPF+DFPFPS  S         E SA V+ RVDWKETPEAHVFKAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG   RRFRLPEN K+DQ+KASME+G                 AI+ISG
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDFPFPSSLSA--------ENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIDISG 153          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.241e-47
Identity = 99/161 (61.49%), Postives = 110/161 (68.32%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MSLIPSFF  RRS+V +PFSLDVWDP +DFPF S  SP  S+ FP E  A V+ RVDWKETPEAHVFKADLPGL              LQISG+R +EKEDKND WHRVERSSG F RRFRLPEN KMD++KASME+G                 +IEISG
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPF-SNSSP--SASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASMENGVLTVTVPKEEIKKAEVKSIEISG 158          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.898e-46
Identity = 96/161 (59.63%), Postives = 108/161 (67.08%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MSLIPS FG RRS+V +PFSLDVWDPF+DF FP+  S         E SA VN RVDWKETPEAHVF+AD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F RRFRLPEN K++Q+KASME+G                 AIEISG
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSA--------ENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.098e-45
Identity = 93/161 (57.76%), Postives = 108/161 (67.08%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MSLIP FFG RRS+V +PFSLD+WDPF+DF  P+       S    E SA V+ RVDWKETPEAHVFKAD+PGL              LQISG+R +EKEDKNDTWHRVERSSG F+RRFRLPEN K++++KASME+G                 AIEISG
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDFHVPT-------SSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEISG 154          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HS17B_ARATH (17.6 kDa class I heat shock protein 2 OS=Arabidopsis thaliana GN=HSP17.6B PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.360e-44
Identity = 93/162 (57.41%), Postives = 110/162 (67.90%), Query Frame = 3
Query:   36 MSLIPSFFGN-RRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MS+IPSFF N RRS++ +PFSLDVWDPF++           SS    E SA+VNARVDW+ETPEAHVFKADLPGL              L+ISG+R +EKEDKNDTWHRVERSSG F+RRFRLPENVKMDQ+KA+ME+G                 +I+ISG
Sbjct:    1 MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELT---------SSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.320e-44
Identity = 90/161 (55.90%), Postives = 109/161 (67.70%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MS+IPSFFG RRS+V +PFSLDVWDPF+DFP  +    + +S+F  ET+A VN  +DWKETP+AHVFKADLPGL              LQISG+R  EKE+KND WHRVERSSG F RRFRLPEN K+D++KA+M +G                 AI+ISG
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVT----SSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 3.957e-44
Identity = 89/140 (63.57%), Postives = 104/140 (74.29%), Query Frame = 3
Query:   36 MSLIPSFFGNRR--SSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESG 449
            MSLIPSFFGN R  +S+ +PFSLDVWDPF++  FPS  S         ETSA+ NARVDWKET EAHVFKADLPG+              L+ISG+R +EKE+K DTWHRVERSSG FSR+F+LPENVKMDQ+KASME+G
Sbjct:    1 MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSG--------ETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENVKMDQVKASMENG 132          
BLAST of FC925115 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 9.745e-43
Identity = 87/161 (54.04%), Postives = 106/161 (65.84%), Query Frame = 3
Query:   36 MSLIPSFFGNRRSSVSNPFSLDVWDPFRDFPFPSGYSPALSSQFPPETSAVVNARVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRKIEKEDKNDTWHRVERSSGMFSRRFRLPENVKMDQIKASMESGXXXXXXXXXXXXXXXXXAIEISG 518
            MS+IPSFFG+RRS+V NPFSLD+WDPF+D+P  +  S   SS+F  ET+A  N  +DWKETP+AHVFKADLPGL              LQISG+R  EKE+KN+ WHRVE SSG F RRFRLPEN  +D++KA ME+G                 +I ISG
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLIT--SSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGVLTVTVPKVEMKKPEVKSIHISG 159          
The following BLAST results are available for this feature:
BLAST of FC925115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
HSP16_SOYBN4.825e-5060.8718.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA4.085e-4960.8718.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP11_SOYBN2.648e-4861.4917.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA2.241e-4761.4918.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP13_SOYBN1.898e-4659.6317.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP14_SOYBN2.098e-4557.7617.5 kDa class I heat shock protein OS=Glycine max... [more]
HS17B_ARATH1.360e-4457.4117.6 kDa class I heat shock protein 2 OS=Arabidops... [more]
HSP11_DAUCA2.320e-4455.9017.8 kDa class I heat shock protein OS=Daucus caro... [more]
HS178_ARATH3.957e-4463.5717.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HSP12_DAUCA9.745e-4354.0418.0 kDa class I heat shock protein OS=Daucus caro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YD01FM1 TF Citrus clementina cDNA clone KN0AAP8YD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925115 ID=FC925115; Name=FC925115; organism=Citrus clementina; type=EST; length=663bp
AAATACCGAAAGCCGTATCACTCTTTTGAGAAACGATGTCTTTGATTCCA
AGCTTCTTCGGAAACCGACGCAGCAGCGTCTCTAATCCATTTTCACTCGA
CGTTTGGGATCCATTCAGGGACTTCCCTTTCCCTTCCGGTTATTCGCCTG
CGCTGTCCTCTCAGTTCCCTCCAGAAACCTCTGCTGTCGTTAATGCCCGC
GTGGACTGGAAGGAAACCCCGGAAGCCCACGTGTTCAAGGCCGATCTTCC
GGGGCTCAGGAAAGAGGAAGTGAAGGTCGAGGTCGAAGACGACAGGGTGC
TTCAGATAAGCGGTCAGAGGAAGATTGAGAAGGAAGACAAGAACGACACG
TGGCATCGCGTTGAGCGTAGCAGTGGCATGTTCTCAAGGAGGTTCCGGCT
GCCTGAGAATGTGAAGATGGATCAGATTAAGGCTTCCATGGAGAGTGGTG
TGCTCACTGTTACTGTTCCGAAAGTGGAGGTGACCAAACCTGATGTTAAG
GCTATCGAAATCTCTGGTTAAACCAGTGTCTGTCTGTATGTCTTTATGCA
TACTTGTATAAGGATGCTGTGATGTTTTGGTTTTGTAATTTGCTTGCATG
AATGTTTGTGTAATGGTATTCTGGGTGTAATCAATAAACTGGACTGTTTT
TTGAAAAAAAAAA
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