FC925154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_ARATH (Signal recognition particle 14 kDa protein OS=Arabidopsis thaliana GN=SRP14 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 2.661e-29 Identity = 62/93 (66.67%), Postives = 74/93 (79.57%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAGEPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M LLQ DPFLNELTSMFE++++KGSVWVT+ +++ GE +EYRCLIRATDGKK +ST+VGAKDHQRFQASYAT+LKAHM AL Sbjct: 1 MVLLQLDPFLNELTSMFEKSKEKGSVWVTLKRSSLKSKVQKRKLSSVGESIEYRCLIRATDGKKTVSTSVGAKDHQRFQASYATILKAHMTAL 93
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_ORYSJ (Signal recognition particle 14 kDa protein OS=Oryza sativa subsp. japonica GN=SRP14 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.785e-25 Identity = 57/93 (61.29%), Postives = 69/93 (74.19%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAGEPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M +LQPDPFL+ELTSM+ER+ +KGSVWVT+ MA GE VEYRCL+RATDGKK I T + AK++ +FQASYAT+LKAHM AL Sbjct: 1 MVVLQPDPFLSELTSMYERSTEKGSVWVTMKRSSMKCQARLKKMAAKGEAVEYRCLVRATDGKKNICTALSAKEYLKFQASYATVLKAHMHAL 93
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_MOUSE (Signal recognition particle 14 kDa protein OS=Mus musculus GN=Srp14 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.188e-14 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAG-EPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M LL+ + FL ELT +F++ R GSV++T+ + G EP E +CL+RATDGK+KIST V +K+ +FQ +Y+ LL+A+M L Sbjct: 1 MVLLESEQFLTELTRLFQKCRSSGSVFITLKKYDGRTKPIPRKSSVEGLEPAENKCLLRATDGKRKISTVVSSKEVNKFQMAYSNLLRANMDGL 94
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_PONAB (Signal recognition particle 14 kDa protein OS=Pongo abelii GN=SRP14 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAG-EPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M LL+ + FL ELT +F++ R GSV++T+ G EP + +CL+RATDGKKKIST V +K+ +FQ +Y+ LL+A+M L Sbjct: 1 MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGL 94
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_MACFA (Signal recognition particle 14 kDa protein OS=Macaca fascicularis GN=SRP14 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAG-EPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M LL+ + FL ELT +F++ R GSV++T+ G EP + +CL+RATDGKKKIST V +K+ +FQ +Y+ LL+A+M L Sbjct: 1 MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGL 94
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_HUMAN (Signal recognition particle 14 kDa protein OS=Homo sapiens GN=SRP14 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.047e-13 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAG-EPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M LL+ + FL ELT +F++ R GSV++T+ G EP + +CL+RATDGKKKIST V +K+ +FQ +Y+ LL+A+M L Sbjct: 1 MVLLESEQFLTELTRLFQKCRTSGSVYITLKKYDGRTKPIPKKGTVEGFEPADNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGL 94
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_CANFA (Signal recognition particle 14 kDa protein OS=Canis familiaris GN=SRP14 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.778e-13 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAG-EPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M LL+ + FL ELT +F++ R GSV++T+ + G EP + +CL+RATDGKKKIST V +K+ +FQ +Y+ LL+A+M L Sbjct: 1 MVLLESEQFLTELTRLFQKCRLSGSVFITLKKYDGRTKPIPRKGSVEGFEPSDNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGL 94
BLAST of FC925154 vs. ExPASy Swiss-Prot
Match: SRP14_BOVIN (Signal recognition particle 14 kDa protein OS=Bos taurus GN=SRP14 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.778e-13 Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 1 Query: 19 MGLLQPDPFLNELTSMFERNRDKGSVWVTVXXXXXXXXXXXXXMATAG-EPVEYRCLIRATDGKKKISTTVGAKDHQRFQASYATLLKAHMAAL 297 M LL+ + FL ELT +F++ R GSV++T+ + G EP + +CL+RATDGKKKIST V +K+ +FQ +Y+ LL+A+M L Sbjct: 1 MVLLESEQFLTELTRLFQKCRLSGSVFITLKKYDGRTKPIPRKGSVEGFEPSDNKCLLRATDGKKKISTVVSSKEVNKFQMAYSNLLRANMDGL 94 The following BLAST results are available for this feature:
BLAST of FC925154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925154 ID=FC925154; Name=FC925154; organism=Citrus clementina; type=EST; length=646bpback to top |