FC925158

Overview
NameFC925158
Unique NameFC925158
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length833
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14553 contig Ccv1_Contig14553:21..853. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925158 vs. ExPASy Swiss-Prot
Match: PCP_PYRFU (Pyrrolidone-carboxylate peptidase OS=Pyrococcus furiosus GN=pcp PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 54/181 (29.83%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  187 INGFKKFQGIAENPTETVVNNLKAYVERRGLPAGVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHLGVNSGSSKFALERQAVNEATFLCPDQLGWQPQQIPVVLEDGGISRSRQTSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSL--FVHVP 723
            + GF+ F G   NPTE +  +L           G+ +G   V        LP +    +  + +T    +  I IH+G+  G S  ++ER AVN      PD  G + +  P+V    G   +  ++L  + I+K L ++G    IS+ AG ++CNYV Y SL  +  KG+  +  F+HVP
Sbjct:    5 VTGFEPFGGEKINPTERIAKDLD----------GIKIGDAQVFGRV----LPVVFGKAKEVLEKTLEEIKPDIAIHVGLAPGRSAISIERIAVNAIDARIPDNEGKKIEDEPIV---PGAPTAYFSTLPIKKIMKKLHERGIPAYISNSAGLYLCNYVMYLSLHHSATKGYPKMSGFIHVP 168          
BLAST of FC925158 vs. ExPASy Swiss-Prot
Match: PCP_PYRHO (Pyrrolidone-carboxylate peptidase OS=Pyrococcus horikoshii GN=pcp PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11
Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = 1
Query:  181 IHINGFKKFQGIAENPTETVVNNLKAYVERRGLPAGVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHLGVNSGSSKFALERQAVNEATFLCPDQLGWQPQQIPVVLEDGGISRSRQTSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGHKSL--FVHVP 723
            I + GF+ F G  +NPT  +V  L   +                 E  G+  LP   K     + +   +    I I+LG+  G +  ++ER AVN      PD  G QP+  P+V  +GG +    T + T  I++ +KK G   V+S  AG ++CN+  Y +L  +  KG+  +  F+HVP
Sbjct:    3 ILLTGFEPFGGDDKNPTMDIVEALSERIP----------------EVVGE-ILPVSFKRAREKLLKVLDDVRPDITINLGLAPGRTHISVERVAVNMIDARIPDNDGEQPKDEPIV--EGGPAAYFAT-IPTREIVEEMKKNGIPAVLSYTAGTYLCNFAMYLTLHTSATKGYPKIAGFIHVP 165          
BLAST of FC925158 vs. ExPASy Swiss-Prot
Match: PCP_THELI (Pyrrolidone-carboxylate peptidase OS=Thermococcus litoralis GN=pcp PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.336e-11
Identity = 54/181 (29.83%), Postives = 85/181 (46.96%), Query Frame = 1
Query:  187 INGFKKFQGIAENPTETVVNNLKAYVERRGLPAGVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHLGVNSGSSKFALERQAVNEATFLCPDQLGWQPQQIPVVLEDGGISRSRQTSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYYHSLRFAEQKGH--KSLFVHVP 723
            I GF+ F G ++NPTE +      Y +R+ +   +  G            LP  +K     + +     +  I I+LG+    S   +ER AVN      PD  G+QP    +  ED  ++     +L   AI K L+  G    IS  AG ++CNYV + +L F++ +G+  K+ F+HVP
Sbjct:    6 ITGFEPFGGDSKNPTEQIAK----YFDRKQIGNAMVYGR----------VLPVSVKRATIELKRYLEEIKPEIVINLGLAPTYSNITVERIAVNIIDARIPDNDGYQPIDEKIE-EDAPLAY--MATLPVRAITKTLRDNGIPATISYSAGTYLCNYVMFKTLHFSKIEGYPLKAGFIHVP 169          
BLAST of FC925158 vs. ExPASy Swiss-Prot
Match: PCP_CLAM3 (Pyrrolidone-carboxylate peptidase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=pcp PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.744e-11
Identity = 56/185 (30.27%), Postives = 86/185 (46.49%), Query Frame = 1
Query:  178 TIHINGFKKFQGIAENPTETVVNNLKAYVERRGLPAGVTLGSCTVLEAAGDGALPTLLKTLESSISQTNTNNEQVIWIHLGVNSGSSKFALERQAVNEATFLCPDQLGWQPQQIPVVLEDGGISRSRQTSLSTEAILKFLKKKGFDVVISDDAGRFVCNYVYY---HSLRFAEQKGHKSLFVHVP 723
            T+ + GF+ F G   NP+ T V  ++   +R    A + +    V  A  D AL   L  ++  +            I +G+  G     +ER A+N      PD  G+QP   PVV  DGG +    T L  +A +  ++ KG   V+S  AG + CN+V+Y   H LR  ++ G +  FVH+P
Sbjct:    3 TVLLTGFEPFDGDTSNPSWTAVQEVR---DRWDGDAEIQVRQLPVDFAKVDDALRAALAEVDPDVV-----------ISVGLAGGIETLEVERVAINVDDARIPDNTGFQPIDEPVV--DGGPAAYFST-LPIKAAVAAVRTKGIPAVVSQTAGTYTCNHVFYLLMHELR--DRPGTRGGFVHIP 168          
The following BLAST results are available for this feature:
BLAST of FC925158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PCP_PYRFU1.427e-1329.83Pyrrolidone-carboxylate peptidase OS=Pyrococcus fu... [more]
PCP_PYRHO1.023e-1129.51Pyrrolidone-carboxylate peptidase OS=Pyrococcus ho... [more]
PCP_THELI1.336e-1129.83Pyrrolidone-carboxylate peptidase OS=Thermococcus ... [more]
PCP_CLAM31.744e-1130.27Pyrrolidone-carboxylate peptidase OS=Clavibacter m... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YE12FM1 TF Citrus clementina cDNA clone KN0AAP8YE12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925158 ID=FC925158; Name=FC925158; organism=Citrus clementina; type=EST; length=833bp
ACGGAAAGGAAACTTTCCCTCTTGCACTTGCTGCCGCACCATAGCCGGCG
GAATTCCCAGAAGGTTGGGGTTCAGTGCATTGCATAGGGAAGATCTACCA
GCAGTGTCACCTTGAAAATTGGGAACTGCATCCTTCTGCAAAGTAAGGAG
ATGGGATCTGAAGGGCCAAAGGCTGTAACCATACATATAAATGGATTTAA
GAAGTTTCAAGGGATTGCTGAAAACCCTACAGAGACTGTAGTTAACAATC
TAAAGGCTTATGTTGAAAGAAGAGGGCTGCCAGCTGGTGTTACTTTAGGC
AGTTGCACTGTTCTGGAGGCAGCTGGAGATGGTGCACTTCCCACACTTTT
GAAGACCTTGGAATCGAGCATATCTCAAACAAATACAAACAATGAACAAG
TCATCTGGATTCATTTGGGGGTAAATAGTGGGTCATCAAAGTTTGCCTTA
GAGCGGCAAGCAGTGAATGAAGCCACGTTCCTTTGTCCAGACCAACTGGG
ATGGCAACCTCAGCAAATTCCAGTAGTCCTTGAGGATGGAGGAATTTCCC
GATCAAGACAGACATCTCTATCCACTGAAGCAATCCTGAAGTTCTTGAAG
AAGAAGGGCTTTGATGTAGTTATATCTGACGATGCAGGCCGTTTCGTTTG
CAATTATGTCTATTACCACTCACTTCGGTTTGCAGAGCAGAAGGGTCACA
AGTCTCTGTTTGTCCATGTTCCTCTCTTCTCAACAATTGATGAAGACACT
CAAATTGCATTCGTAGCCACACTCTTTGAGGCCGTTGCATCAACATGTTG
AATAAATGATTATTTGAATTTCCATCTGTTTTC
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