FC925181
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925181 vs. ExPASy Swiss-Prot
Match: SRRM1_PONAB (Serine/arginine repetitive matrix protein 1 OS=Pongo abelii GN=SRRM1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.872e-36 Identity = 84/171 (49.12%), Postives = 109/171 (63.74%), Query Frame = 3 Query: 27 MSGGFFRGTSADQDTRFSNKQAKLLKTQKFASELDHLVDMTKVKMDVMKPWIATRVTELLGFEDEVLINFIYGLLEGKEVNGKEVQISLTGFME-KHTAKFMKELWTLLLSAQKNASGVPQQFXXXXXXXXXXXXXXXXXIA---------NEIQKKEKESRELDKERSRN 509 M GFFRGTSA+QD RFSNKQ KLLK KFA L+ VDM+KV ++V+KPWI RVTE+LGFED+V+I FI+ LE K + K +QI+LTGF+ K+ +FM ELW LLLSAQ+N +G+P F +A ++ K+EKES +ERSR+ Sbjct: 1 MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRS 171
BLAST of FC925181 vs. ExPASy Swiss-Prot
Match: SRRM1_MOUSE (Serine/arginine repetitive matrix protein 1 OS=Mus musculus GN=Srrm1 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.872e-36 Identity = 84/171 (49.12%), Postives = 109/171 (63.74%), Query Frame = 3 Query: 27 MSGGFFRGTSADQDTRFSNKQAKLLKTQKFASELDHLVDMTKVKMDVMKPWIATRVTELLGFEDEVLINFIYGLLEGKEVNGKEVQISLTGFME-KHTAKFMKELWTLLLSAQKNASGVPQQFXXXXXXXXXXXXXXXXXIA---------NEIQKKEKESRELDKERSRN 509 M GFFRGTSA+QD RFSNKQ KLLK KFA L+ VDM+KV ++V+KPWI RVTE+LGFED+V+I FI+ LE K + K +QI+LTGF+ K+ +FM ELW LLLSAQ+N +G+P F +A ++ K+EKES +ERSR+ Sbjct: 1 MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRS 171
BLAST of FC925181 vs. ExPASy Swiss-Prot
Match: SRRM1_HUMAN (Serine/arginine repetitive matrix protein 1 OS=Homo sapiens GN=SRRM1 PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 4.872e-36 Identity = 84/171 (49.12%), Postives = 109/171 (63.74%), Query Frame = 3 Query: 27 MSGGFFRGTSADQDTRFSNKQAKLLKTQKFASELDHLVDMTKVKMDVMKPWIATRVTELLGFEDEVLINFIYGLLEGKEVNGKEVQISLTGFME-KHTAKFMKELWTLLLSAQKNASGVPQQFXXXXXXXXXXXXXXXXXIA---------NEIQKKEKESRELDKERSRN 509 M GFFRGTSA+QD RFSNKQ KLLK KFA L+ VDM+KV ++V+KPWI RVTE+LGFED+V+I FI+ LE K + K +QI+LTGF+ K+ +FM ELW LLLSAQ+N +G+P F +A ++ K+EKES +ERSR+ Sbjct: 1 MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRS 171
BLAST of FC925181 vs. ExPASy Swiss-Prot
Match: SRRM1_CHICK (Serine/arginine repetitive matrix protein 1 OS=Gallus gallus GN=SRRM1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.085e-35 Identity = 80/162 (49.38%), Postives = 108/162 (66.67%), Query Frame = 3 Query: 27 MSGGFFRGTSADQDTRFSNKQAKLLKTQKFASELDHLVDMTKVKMDVMKPWIATRVTELLGFEDEVLINFIYGLLEGKEVNGKEVQISLTGFME-KHTAKFMKELWTLLLSAQKNASGVPQQFXXXXXXXXXXXXXXXXXIANEIQKKEKESRELDKERSRN 509 M GFFRGTSA+QD RFSNKQ KLLK KFA L+ VDM+KV ++V+KPWI RVTE+LGFED+V+I FI+ LE K + K +QI+LTGF+ K+ +FM ELW LLLSAQ+N +G+P F +A+ ++K++++ + DKE N Sbjct: 1 MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLAS-MKKQDEDKEKRDKEDKDN 161
BLAST of FC925181 vs. ExPASy Swiss-Prot
Match: YJQ5_SCHPO (PWI domain-containing protein C825.05c OS=Schizosaccharomyces pombe GN=SPCC825.05c PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29 Identity = 58/132 (43.94%), Postives = 92/132 (69.70%), Query Frame = 3 Query: 36 GFFRGTSADQDTRFSNKQAKLLKTQKFASELDHLVDMTKVKMDVMKPWIATRVTELLGFEDEVLINFIYGLLE-------------GKEVNGKEVQISLTGFMEKHTAKFMKELWTLLLSAQKNASGVPQQF 392 GF++G +A+Q+T F+ KL+++ KF + D VDM KV ++V+KPWIATR+ EL+GFEDEV+INF+YG+LE ++ ++VQ++LTGF+E + F +ELW+L++SA +N G+P++F Sbjct: 3 GFYKGVAAEQETLFTTADKKLMRSTKFPASYDTKVDMKKVNIEVLKPWIATRLNELIGFEDEVVINFVYGMLEEAVEASKTSDSQNESTLDPRKVQLNLTGFLESNATAFTEELWSLIISASQNQYGIPEKF 134 The following BLAST results are available for this feature:
BLAST of FC925181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925181 ID=FC925181; Name=FC925181; organism=Citrus clementina; type=EST; length=742bpback to top |