FC925182
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 1.399e-60 Identity = 107/133 (80.45%), Postives = 121/133 (90.98%), Query Frame = 1 Query: 1 PGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVFA 399 PGGYVYQKAYLEFFCS +KL LV+KSKA P IT+MAVNK NW +N ++DVNAVTWGVFPAKE+IQPT+VDPASFKVWKDEAFEIWSRSWA+LYPE D SRKLLEEV++SYYLVSLVDN+YINGD+F+VFA Sbjct: 460 PGGYVYQKAYLEFFCSKDKLDTLVEKSKAFPSITYMAVNKSENWVSNTGESDVNAVTWGVFPAKEVIQPTIVDPASFKVWKDEAFEIWSRSWANLYPEDDPSRKLLEEVKNSYYLVSLVDNNYINGDIFSVFA 592
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2) HSP 1 Score: 225.713 bits (574), Expect = 1.310e-58 Identity = 107/135 (79.26%), Postives = 117/135 (86.67%), Query Frame = 1 Query: 1 PGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVFADL 405 P GYVYQKAYLEFFCS EKL A+V+K KALP IT+MAVNK W +N Q DVNAVTWGVFPAKEIIQPT+VDPASF VWKDEAFE WSRSWA+LYPE D SR LLEEV++SYYLVSLV+NDYINGD+F VFADL Sbjct: 460 PVGYVYQKAYLEFFCSKEKLDAVVEKCKALPSITYMAVNKGEQWVSNTAQADVNAVTWGVFPAKEIIQPTIVDPASFNVWKDEAFETWSRSWANLYPEADPSRNLLEEVKNSYYLVSLVENDYINGDIFAVFADL 594
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 7.438e-54 Identity = 96/135 (71.11%), Postives = 114/135 (84.44%), Query Frame = 1 Query: 1 PGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVFADL 405 PGGYVYQKAYLEFFCS EKL L++KSKA P +T++AVNK+G +N+ VNAVTWGVFP KEI+QPTVVD ASF VWKDEAFEIWS+ WA L+PEGDSSR++L++VQ SY+LVSLVDNDYINGDLF F ++ Sbjct: 460 PGGYVYQKAYLEFFCSKEKLDQLIEKSKAFPSLTYIAVNKDGESFSNIPTNAVNAVTWGVFPGKEIVQPTVVDSASFMVWKDEAFEIWSKGWACLFPEGDSSREILDKVQKSYFLVSLVDNDYINGDLFAAFKEI 594
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 4.081e-52 Identity = 93/132 (70.45%), Postives = 110/132 (83.33%), Query Frame = 1 Query: 1 PGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYINGDLFTVF 396 PGGYVYQKAYLEFFC+ EKL L++K KA P +T++AVNK+G +N++ VNAVTWGVFP KEIIQPTVVD ASF VWKDEAFEIW+R W ++PEGDSSR+LLE+VQ +YYLVSLVDNDY+ GDLF F Sbjct: 460 PGGYVYQKAYLEFFCAKEKLDQLIEKIKAFPSLTYIAVNKDGETFSNISPNAVNAVTWGVFPGKEIIQPTVVDHASFMVWKDEAFEIWTRGWGCMFPEGDSSRELLEKVQKTYYLVSLVDNDYVQGDLFAAF 591
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 7.490e-30 Identity = 62/123 (50.41%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 4 GGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 369 GGYV+QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDND+ Sbjct: 504 GGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDF 626
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3) HSP 1 Score: 130.183 bits (326), Expect = 7.490e-30 Identity = 62/123 (50.41%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 4 GGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 369 GGYV+QKAYLEFF S E AL+ K + + VN +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDND+ Sbjct: 504 GGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDF 626
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR_MOUSE (Methylenetetrahydrofolate reductase OS=Mus musculus GN=Mthfr PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29 Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 4 GGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 369 GGYV+QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDN++ Sbjct: 503 GGYVFQKAYLEFFTSRETVEALLQVLKTYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPISFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEF 625
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 3.717e-29 Identity = 60/123 (48.78%), Postives = 80/123 (65.04%), Query Frame = 1 Query: 4 GGYVYQKAYLEFFCSPEKLTALVDKSKALPF-ITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 369 GGYV+QKAYLEFF S E + AL+ K + + V+ +G N + NAVTWG+FP +EIIQPTVVDP SF WKDEAF +W W LY E SR +++ + +Y+LV+LVDN++ Sbjct: 503 GGYVFQKAYLEFFTSRETVEALLQVLKKYELRVNYHIVDVKGENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIEQWGKLYEEESPSRMIIQYIHDNYFLVNLVDNEF 625
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.751e-27 Identity = 61/133 (45.86%), Postives = 79/133 (59.40%), Query Frame = 1 Query: 1 PGGYVYQKAYLEFFCSPEKLTALVDKSKALPFITFMAVNKEGNWKANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDYING-DLFTVF 396 P GYV+QK Y+EFF P L L + K L +++ NK G+ N NAVTWGVFP +EIIQPT+V+ SF WKDEA+ + WA+ Y SRKLL + ++L +VDND+ NG LF VF Sbjct: 453 PNGYVFQKPYVEFFVHPSLLNELKETVKKLNSVSYFVTNKNGDLDTNSQYEIPNAVTWGVFPNREIIQPTIVESTSFLAWKDEAYSL-GMEWANAYSPDSISRKLLVSMMKEWFLCVIVDNDFQNGQSLFDVF 584
BLAST of FC925182 vs. ExPASy Swiss-Prot
Match: MTHR_CAEEL (Probable methylenetetrahydrofolate reductase OS=Caenorhabditis elegans GN=C06A8.1 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 2.945e-26 Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = 1 Query: 1 PGGYVYQKAYLEFFCSPE---KLTALVDKSKALPFITFMAVNKEGNW-KANVNQTDVNAVTWGVFPAKEIIQPTVVDPASFKVWKDEAFEIWSRSWASLYPEGDSSRKLLEEVQSSYYLVSLVDNDY 369 PGGY YQKAYLE F + E KL ++++ + + + A+NK+ + K N +T AVTWGVFP EI QPTVVDP SF+ W+DEA+++W W YP+ S +++ V + LV+LVDND+ Sbjct: 519 PGGYCYQKAYLECFMTAELSDKLIQIIEREFPVR-VNYHAINKDSTFDKTNSEETTPIAVTWGVFPGSEIAQPTVVDPLSFRAWRDEAYQMWMAQWGDFYPKESKSYGVIKAVHDEFRLVTLVDNDF 644 The following BLAST results are available for this feature:
BLAST of FC925182 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925182 ID=FC925182; Name=FC925182; organism=Citrus clementina; type=EST; length=587bpback to top |