FC925196

Overview
NameFC925196
Unique NameFC925196
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length581
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14084 contig Ccv1_Contig14084:148..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PT110_ORYSJ (Probable inorganic phosphate transporter 1-10 OS=Oryza sativa subsp. japonica GN=PHT1-10 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.120e-54
Identity = 110/178 (61.80%), Postives = 127/178 (71.35%), Query Frame = 1
Query:   40 VLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQI-PNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAV 570
            VL ALD A+TQYYHF+AI+IAGMGL TD+YDLFCI P+MK++GR+YYSDG  R  + P AVVS  + +ALLG VIG +VFG LGD +GRRRVYG             GFS+C T++C                  DYPLSATIMSEFAN+ TRGAFIAAVFSMQGFGILASS VTMAV
Sbjct:    6 VLTALDQARTQYYHFKAIVIAGMGLFTDSYDLFCIAPVMKIVGRVYYSDGGARPGVTPPAVVSATVGVALLGAVIGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGFSVCRTRRCALASLCFFRFLLGVGVGGDYPLSATIMSEFANRRTRGAFIAAVFSMQGFGILASSAVTMAV 183          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PHT18_ARATH (Probable inorganic phosphate transporter 1-8 OS=Arabidopsis thaliana GN=PHT1-8 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.788e-52
Identity = 108/181 (59.67%), Postives = 126/181 (69.61%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQ-CVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVC 573
            +KVL +LD A+TQ+YHF+AII+AGMGL TDAYDLFCI P+MK++  +YY+  +    I  AV+S   A+ALLGT  GQLVFG LGD +GRRRVYG            CGFS+CTT++ CV                 DYPLSATIMSEFANK TRGAFIAAVFSMQG GIL SS VTMAVC
Sbjct:    3 IKVLSSLDVARTQWYHFKAIIVAGMGLFTDAYDLFCIAPVMKMISHVYYNGDS----INTAVLSTSYAIALLGTATGQLVFGYLGDRVGRRRVYGLCLIIMILSSFGCGFSVCTTRRSCVMVSLGFFRFFLGLGIGGDYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILVSSAVTMAVC 179          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PHT19_ARATH (Probable inorganic phosphate transporter 1-9 OS=Arabidopsis thaliana GN=PHT1-9 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 7.514e-51
Identity = 105/181 (58.01%), Postives = 125/181 (69.06%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQ-CVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVC 573
            L +L ALD+A+ Q+YHF+AII+AGMGL TDAYDLFCI PIMK++ +IYY     +  I  A++S   A+ALLGT +GQL+FG LGD +GRR+VYG            CGFS+CTT++ CV                 DYPLSATIMSEFANK TRGAFIAAVFSMQG GIL SS VTM VC
Sbjct:    4 LSLLSALDAARIQWYHFKAIIVAGMGLFTDAYDLFCIAPIMKMISQIYY----HKDSIGTALLSTSYAIALLGTALGQLIFGYLGDRVGRRKVYGLSLLIMVFSSFGCGFSVCTTRRSCVMVSLGFFRFVLGLGIGGDYPLSATIMSEFANKRTRGAFIAAVFSMQGLGILMSSAVTMVVC 180          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PHT19_ORYSJ (Probable inorganic phosphate transporter 1-9 OS=Oryza sativa subsp. japonica GN=PHT1-9 PE=2 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.282e-50
Identity = 104/186 (55.91%), Postives = 123/186 (66.13%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYS-------DGADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAV 570
            ++VL ALD A+TQYYHF+AI+IAGMGL TD+YDLFCI P+MK+ GR+YY+        G+     P AVVS  + +ALLG V G +VFG LGD +GRRRVYG             G S+C T++C                  DYPLSATIMSEFAN+ TRGAFIAAVFSMQGFGIL SS VTMAV
Sbjct:    5 IRVLAALDQARTQYYHFKAIVIAGMGLFTDSYDLFCISPVMKIFGRVYYAPSGSVDGSGSGPGVTPPAVVSATVGVALLGAVAGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGLSVCRTRRCALASLCFFRFLLGVGVGGDYPLSATIMSEFANRRTRGAFIAAVFSMQGFGILVSSAVTMAV 190          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PT112_ORYSJ (Probable inorganic phosphate transporter 1-12 OS=Oryza sativa subsp. japonica GN=PHT1-12 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 7.531e-43
Identity = 96/181 (53.04%), Postives = 114/181 (62.98%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRF--QIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAV 570
            L+VL ALD+AKTQ+YHF AII+AGMG  TDAYDLFCI  + KLLGRIYY+D A      +P  + + +  +AL GT+ GQL FG LGD +GR+ VYG             G S   T   V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGILA   VT+A+
Sbjct:    8 LQVLNALDAAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYTDPASPTPGSLPPNIAAAVNGVALCGTLSGQLFFGWLGDKLGRKSVYGMTLLLMVICSIASGLSFSHTPTSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVTLAM 188          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PHT18_ORYSJ (Probable inorganic phosphate transporter 1-8 OS=Oryza sativa subsp. japonica GN=PHT1-8 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.375e-42
Identity = 94/181 (51.93%), Postives = 113/181 (62.43%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGA--DRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAV 570
            L+VL ALD+AKTQ+YHF AI++AGMG  TDAYDLFCI  + KLLGRIYY+D A  +   +P  V + +  +A  GT+ GQL FG LGD +GR+ VYG             G S   T   V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGILA   VT+ +
Sbjct:   10 LQVLSALDAAKTQWYHFTAIVVAGMGFFTDAYDLFCISLVTKLLGRIYYTDLAKENPGSLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKSVYGMTLLMMVICSIASGLSFSHTPTSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVTLII 190          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PHT17_ORYSJ (Probable inorganic phosphate transporter 1-7 OS=Oryza sativa subsp. japonica GN=PHT1-7 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.420e-41
Identity = 94/184 (51.09%), Postives = 114/184 (61.96%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYY-SDGADR-FQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKI 579
            + VL ALDSAKTQ+YHF AI+IAGMG  TDAYDLFCI  + KL+GR+YY +DGA +   +P  V + +  +A +GT+ GQL FG LGD +GR+ VYG             G S   T   V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGILA   V + +  I
Sbjct:    6 MHVLSALDSAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLIGRVYYTADGASKPGSLPPNVSAAVNGVAFVGTLTGQLFFGWLGDRVGRKSVYGMTLLLMIICSVASGLSFGDTPTSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGAVAIGITAI 189          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PHT13_ORYSJ (Probable inorganic phosphate transporter 1-3 OS=Oryza sativa subsp. japonica GN=PHT1-3 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.164e-41
Identity = 94/181 (51.93%), Postives = 112/181 (61.88%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSD--GADRFQIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAV 570
            LKVL  LD A+TQ+YHF AI+IAGMG  TDAYDLFCI  + KLLGRIYY+D  G +   +P  V + +  +AL GT+ GQL FG LGD +GR+ VYG             G S   T + V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGIL  + V + V
Sbjct:    6 LKVLTTLDHARTQWYHFMAIVIAGMGFFTDAYDLFCISLVSKLLGRIYYTDLAGDNPGSLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLVLMVVCSVASGLSFGRTAKGVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILFGAIVALVV 186          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PHT11_ORYSJ (Inorganic phosphate transporter 1-1 OS=Oryza sativa subsp. japonica GN=PHT1-1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.049e-41
Identity = 93/181 (51.38%), Postives = 112/181 (61.88%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRF--QIPNAVVSPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAV 570
            L VL  LD AKTQ+YHF AI+IAGMG  TDAYDLFCI  + KLLGRIYY+D +      +P  V + +  +AL GT+ GQL FG LGD +GR+ VYG             G S  ++ + V                 DYPLSATIMSE+ANK TRGAFIAAVF+MQGFGIL  + V +AV
Sbjct:    6 LNVLSTLDQAKTQWYHFMAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDDSKDTPGALPPNVSAAVTGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLILMVVCSVASGLSFGSSAKGVVSTLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILFGAIVALAV 186          
BLAST of FC925196 vs. ExPASy Swiss-Prot
Match: PT111_ORYSJ (Inorganic phosphate transporter 1-11 OS=Oryza sativa subsp. japonica GN=PHT1-11 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 1.570e-40
Identity = 90/186 (48.39%), Postives = 115/186 (61.83%), Query Frame = 1
Query:   34 LKVLPALDSAKTQYYHFQAIIIAGMGLLTDAYDLFCIPPIMKLLGRIYYSDGADRFQIPNAVV----SPMLALALLGTVIGQLVFGRLGDLIGRRRVYGXXXXXXXXXXXXCGFSICTTKQCVXXXXXXXXXXXXXXXXXDYPLSATIMSEFANKMTRGAFIAAVFSMQGFGILASSTVTMAVCKI 579
            L VL ALDSA+TQ YH +AI+IAGMG  TDAYDLFCI  + KLLGR+YY         P A+     + ++ +AL+GT++GQLVFG  GD +GR+RVYG             G S  ++++ V                 DYPLSATIMSE++NK TRGAFIAAVF+MQG GI+ +  V+M V  I
Sbjct:   10 LAVLDALDSARTQMYHMKAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYQPDGSTDSKPGALSKTANNMVIGVALVGTLMGQLVFGYFGDKLGRKRVYGVTLILMAACAIGSGLSFGSSRKAVIGTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGVGIIFAGLVSMIVSSI 195          
The following BLAST results are available for this feature:
BLAST of FC925196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PT110_ORYSJ1.120e-5461.80Probable inorganic phosphate transporter 1-10 OS=O... [more]
PHT18_ARATH1.788e-5259.67Probable inorganic phosphate transporter 1-8 OS=Ar... [more]
PHT19_ARATH7.514e-5158.01Probable inorganic phosphate transporter 1-9 OS=Ar... [more]
PHT19_ORYSJ1.282e-5055.91Probable inorganic phosphate transporter 1-9 OS=Or... [more]
PT112_ORYSJ7.531e-4353.04Probable inorganic phosphate transporter 1-12 OS=O... [more]
PHT18_ORYSJ6.375e-4251.93Probable inorganic phosphate transporter 1-8 OS=Or... [more]
PHT17_ORYSJ1.420e-4151.09Probable inorganic phosphate transporter 1-7 OS=Or... [more]
PHT13_ORYSJ3.164e-4151.93Probable inorganic phosphate transporter 1-3 OS=Or... [more]
PHT11_ORYSJ7.049e-4151.38Inorganic phosphate transporter 1-1 OS=Oryza sativ... [more]
PT111_ORYSJ1.570e-4048.39Inorganic phosphate transporter 1-11 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA03FM1 TF Citrus clementina cDNA clone KN0AAP11YA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925196 ID=FC925196; Name=FC925196; organism=Citrus clementina; type=EST; length=581bp
CGGAGATAAGAAAAAAATAAATAAGAATGGGCGTTGAAAGTGCTCCCAGC
GCTAGACTCAGCAAAGACCCAGTACTATCACTTCCAAGCCATAATAATAG
CCGGGATGGGGCTCCTTACCGATGCCTATGACCTCTTCTGTATCCCGCCC
ATCATGAAGCTCCTCGGAAGAATCTACTACAGCGATGGCGCCGATCGATT
CCAAATCCCAAACGCGGTCGTATCGCCGATGTTAGCCCTGGCTTTACTGG
GCACGGTGATAGGGCAGCTGGTCTTCGGCAGACTAGGTGACCTCATCGGA
CGTCGGCGCGTGTACGGATTAGCATTGATGTTGATGGTGCTTAGCTCCCT
TGCATGTGGCTTCTCCATTTGCACCACTAAACAATGCGTCCTCGGGAGTC
TAGGCTTCTTCAGGTTCTTGCTTGGAGTTGGCATCGGCGGGGACTATCCC
TTATCTGCTACCATCATGTCCGAGTTCGCTAACAAGATGACGCGTGGCGC
CTTCATTGCGGCGGTTTTTTCTATGCAGGGCTTTGGTATCTTGGCCAGCT
CTACGGTCACCATGGCGGTTTGCAAAATCTT
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