FC925207

Overview
NameFC925207
Unique NameFC925207
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length478
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15314 contig Ccv1_Contig15314:42..519. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 8.085e-59
Identity = 112/157 (71.34%), Postives = 123/157 (78.34%), Query Frame = 3
Query:   12 LPLLVTLSLIKASQ--GARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            L LL+ +SLI +S      GIAIYWGQNGNEGTLT TC+T KY+YVNIAFLNKFGNGQTP+IN AGHCNPAAGGC +VS+ I+SCQ +GIKVM                DAKNVADYLWNNFLGG SSSRPLG AVLDGIDFDIE GSTL+WDDLAR
Sbjct:    9 LLLLLAISLIMSSSHVDGGGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLAR 165          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.801e-58
Identity = 111/156 (71.15%), Postives = 122/156 (78.21%), Query Frame = 3
Query:   15 PLLVTLSLIKASQG--ARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            PLL++LS++   Q   A GIAIYWGQNGNEGTLT TC TGKY+YVNIAFLNKFGNGQTPEIN AGHCNPA+ GC  VS  I++CQ+RGIKVM                DA+NVA+YLWNNFLGG SSSRPLG AVLDGIDFDIE GSTLHWDDLAR
Sbjct:    9 PLLISLSVLALLQTSYAGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSVSTGIRNCQNRGIKVMLSIGGGAGSYSLSSSNDAQNVANYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGSTLHWDDLAR 164          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIA_ARATH (Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 205.297 bits (521), Expect = 1.131e-52
Identity = 101/152 (66.45%), Postives = 112/152 (73.68%), Query Frame = 3
Query:   24 VTLSLIKASQGARG-IAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            ++ SL K S  +RG IAIYWGQNGNEG L++TCATG+YAYVN+AFL KFGNGQTPE+N AGHCNPAA  C      +K CQSRGIKVM                DAK +ADYLWNNFLGG SSSRPLG AVLDGIDF+IE GS  HWDDLAR
Sbjct:   17 ISCSLSKPSDASRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLAR 168          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIA_PHAAN (Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.430e-47
Identity = 93/158 (58.86%), Postives = 107/158 (67.72%), Query Frame = 3
Query:    3 ATFLPLLVTLSLIKASQGARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            A  LPLL  +S  K S  A GI++YWGQNGNEG+L   C TG Y YVNIAFL  FG GQTP++N AGHCNP+   C V SD IK CQS+ IKV+                DA  VA+Y+WNNFLGG SSSRPLG A+LDG+DFDIE G+  HWDDLAR
Sbjct:   13 ALLLPLLF-ISFFKPSH-AGGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVFSDQIKECQSKDIKVLLSLGGASGSYSLTSADDATQVANYIWNNFLGGQSSSRPLGDAILDGVDFDIESGTGEHWDDLAR 168          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 3.523e-46
Identity = 89/157 (56.69%), Postives = 107/157 (68.15%), Query Frame = 3
Query:    6 TFLPLLVTLSLIKASQGARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            T L +   LS I  S  A GIAIYWGQNGNEG+L STCATG Y +VNIAFL+ FG+GQ P +N AGHCNP   GC  +SD I SC+S+ +KV+                DAK VA+++WN++LGG S SRPLGAAVLDG+DFDIE GS   WD LA+
Sbjct:    8 TTLSIFFLLSSIFRSSDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQVANFIWNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQ 164          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.749e-45
Identity = 89/157 (56.69%), Postives = 108/157 (68.79%), Query Frame = 3
Query:    6 TFLPLLVTLSLIKASQGARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            +FL   + L L      A  I IYWGQNGNEG+L  TCAT  YA VNIAFL  FGNGQ P +N AGHC+P AG C  +S+ I++CQ++GIKVM                DA+NVA+YLWNN+LGG S++RPLG AVLDGIDFDIE G+T HWD+LA+
Sbjct:    5 SFLLTALVLFLRALKLEAGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACTGLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARNVANYLWNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHWDELAK 161          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 8.678e-45
Identity = 85/155 (54.84%), Postives = 108/155 (69.68%), Query Frame = 3
Query:   12 LPLLVTLSLIKASQGARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            +P L+ +SL+  S  A GIA+YWGQNGNEG+L   C T  Y +VNIAFL+ FGNGQ P+IN AGHC+P+  GC   S  I++CQ++GIKV+                +A  +A+YLWNNFLGGTS+SRPLG AVLDGIDFDIE G   H+D+LA+
Sbjct:    8 IPSLLLISLLIKSSNAAGIAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSPEIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNFLGGTSTSRPLGDAVLDGIDFDIESGGQ-HYDELAK 161          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIE_BETVU (Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.872e-39
Identity = 82/156 (52.56%), Postives = 100/156 (64.10%), Query Frame = 3
Query:    9 FLPLLVTLSLIKASQGARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            FL  L+  +  ++S G++ I IYWGQNG+EG+L  TC +G Y  V +AF+  FGNGQTP +N AGHC+PA   C  +S  IK+CQ  GIKV+                DA   ADYLWN +LGG SS+RPLG AVLDGIDFDIE G    WDDLAR
Sbjct:   10 FLISLLIFASFESSHGSQ-IVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDPAT-NCNSLSSDIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANTFADYLWNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLAR 163          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: CHIB_TOBAC (Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.585e-38
Identity = 82/155 (52.90%), Postives = 100/155 (64.52%), Query Frame = 3
Query:   12 LPLLVTLSLIKASQGARGIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGGTSSSRPLGAAVLDGIDFDIEQGSTLHWDDLAR 476
            LP+ + L   K   G   I +YWGQ+  EG L  TC +G Y  VNIAFL+ FGN QTP++N AGHC P++GGC+ ++ +I+ CQS GIK+M                DA+ VADYLWNNFLGG SS RPLG AVLDGIDFDIE G   H+  LAR
Sbjct:   11 LPIFLLLLTSKVKAG--DIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQQLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSVDDARQVADYLWNNFLGGQSSFRPLGDAVLDGIDFDIELGQP-HYIALAR 162          
BLAST of FC925207 vs. ExPASy Swiss-Prot
Match: XIP2_ORYSJ (Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.300e-21
Identity = 60/141 (42.55%), Postives = 78/141 (55.32%), Query Frame = 3
Query:   63 GIAIYWGQNGNEGTLTSTCATGKYAYVNIAFLNKFGNGQTPEINPAGHCNPAAGGCRVVSDAIKSCQSRGIKVMXXXXXXXXXXXXXXXXDAKNVADYLWNNFLGG--TSSSRPLG-AAVLDGIDFDIEQGSTLHWDDLAR 476
            G+A+YWG++  EG+L   C TG+Y  V I F N FG+G+   ++ +GH   A G        IK CQSRGI V+                 A +VAD LWN +LGG     +RP G  A +DGIDF I+QG   H+DDLAR
Sbjct:   31 GLAVYWGRHKEEGSLREACDTGRYTTVIITFYNAFGHGRY-SLDISGHPLAAVGA------DIKHCQSRGITVLLSIGGQGGAYSLPTNASAADVADNLWNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLAR 164          
The following BLAST results are available for this feature:
BLAST of FC925207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
CHLY_HEVBR8.085e-5971.34Hevamine-A OS=Hevea brasiliensis PE=1 SV=2[more]
CHIT3_VITVI1.801e-5871.15Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE... [more]
CHIA_ARATH1.131e-5266.45Acidic endochitinase OS=Arabidopsis thaliana GN=CH... [more]
CHIA_PHAAN1.430e-4758.86Acidic endochitinase OS=Phaseolus angularis PE=2 S... [more]
CHIA_CUCSA3.523e-4656.69Acidic endochitinase OS=Cucumis sativus PE=1 SV=1[more]
CHIA_TOBAC1.749e-4556.69Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=... [more]
CHIA_CICAR8.678e-4554.84Acidic endochitinase OS=Cicer arietinum PE=2 SV=1[more]
CHIE_BETVU1.872e-3952.56Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 P... [more]
CHIB_TOBAC1.585e-3852.90Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1[more]
XIP2_ORYSJ2.300e-2142.55Xylanase inhibitor protein 2 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP11YA10FM1 TF Citrus clementina cDNA clone KN0AAP11YA10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925207 ID=FC925207; Name=FC925207; organism=Citrus clementina; type=EST; length=478bp
TAGCAACCTTCCTCCCCCTGCTGGTCACTCTGTCATTGATCAAAGCCTCC
CAAGGCGCCCGCGGCATCGCAATCTATTGGGGCCAAAACGGCAACGAGGG
TACCCTCACTTCCACCTGTGCCACAGGCAAATATGCTTATGTCAACATAG
CTTTCCTGAACAAGTTTGGCAACGGCCAGACCCCTGAAATTAACCCTGCC
GGCCACTGCAACCCCGCAGCCGGTGGCTGCAGAGTCGTCAGCGACGCAAT
CAAGAGTTGTCAGAGCCGAGGCATCAAAGTTATGCTTTCCCTCGGAGGTG
GGGTTGGTAGCTACTCTTTGGCTTCTGTAGCTGATGCCAAGAATGTAGCT
GATTACTTGTGGAACAATTTCTTGGGGGGAACATCAAGTTCAAGGCCATT
AGGTGCTGCTGTGTTGGACGGTATTGATTTTGATATTGAGCAAGGCTCAA
CTTTGCATTGGGATGACCTTGCAAGGTT
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