FC925210

Overview
NameFC925210
Unique NameFC925210
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length595
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1964 contig Ccv1_Contig1964:2..596. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: U520_HUMAN (U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens GN=SNRNP200 PE=1 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 3.669e-80
Identity = 143/198 (72.22%), Postives = 170/198 (85.86%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPA+TVIIKGTQ+Y PEKG WTEL  LDI+QMLGRAGRPQYD+ GEGI+IT H EL+YYLSL+NQQLPIESQ VSKL D LNAEIVLG VQNAK+A NW+GY YLYIRMLR+P LYG++ + LK D  L +RR DLVHTAA +LD+NNLVKYD+K+G FQVT+LGRIAS+YYI++ T+ TYN+ LKPT+ +IEL R+
Sbjct:  820 NLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRV 1017          

HSP 2 Score: 98.9821 bits (245), Expect = 1.915e-20
Identity = 57/186 (30.65%), Postives = 103/186 (55.38%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHL 558
            N+ A+ VII  TQ Y+ +  A+ +    D++QM+G A RP  D  G  +I+   S+  ++   + + LP+ES     + D  NAEIV  T++N ++A +++ +T+LY RM +NP  Y L     +    L +  ++LV    + L+++  +  + +     + +LG IA+YYYI++ TI  ++  L
Sbjct: 1655 NVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRH---LSDHLSELVEQTLSDLEQSKCISIEDEMDVAPL-NLGMIAAYYYINYTTIELFSMSL 1836          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: U520_DROME (Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Drosophila melanogaster GN=CG5931 PE=2 SV=4)

HSP 1 Score: 293.508 bits (750), Expect = 5.298e-79
Identity = 137/198 (69.19%), Postives = 172/198 (86.87%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPA+TVIIKGTQ+Y+PEKG W EL+ LD++QMLGRAGRPQYD+ GEGI+IT HSEL++YLSL+NQQLPIESQF+SKL D LNAEIVLGTVQ+ ++A NW+GYTYLYIRMLRNP LYG++ + +K D  L + RADL+HTAA  L+R+ L+KYDRK+G+FQVTDLGRIAS+YY++H T+ TYN+ LK T+ +IEL R+
Sbjct:  820 NLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRV 1017          

HSP 2 Score: 102.064 bits (253), Expect = 2.262e-21
Identity = 53/183 (28.96%), Postives = 105/183 (57.38%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYN 549
            ++ A+ VII  TQ Y+ +  ++ +    D++QM+GRA RP  D+  + +++   S+  ++   +N+ LPIES    ++ D  NAE+V  T++N ++A +++ +T+LY R+ +NP  Y L     +    L +  ++LV    + L+++  +  +       + +LG IA+YYYI++ TI  ++
Sbjct: 1654 SISAHLVIIMDTQFYNGKNHSYEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRH---LSDHLSELVENTLSDLEQSKCISVEDDMDTLPL-NLGMIAAYYYINYTTIELFS 1832          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: U520_CAEEL (Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Caenorhabditis elegans GN=Y46G5A.4 PE=3 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 9.677e-73
Identity = 128/198 (64.65%), Postives = 160/198 (80.81%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPA+TVIIKGTQIY+PEKG WTEL  LDIMQMLGRAGRPQYD  GEGI+IT HSEL+YYLSLMNQQLP+ESQ VS+L D LNAE+VLGTV +  EA NW+GYT+L++RML+NP LYG+  E  + D  L +RRADL+HTA  +LD+  L+KYD++SG  Q T+LGRIAS++Y ++ ++ TYN+ L  T  DI+L R+
Sbjct:  813 NLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQYYLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGITHEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTYESMQTYNKLLVETCSDIDLFRI 1010          

HSP 2 Score: 96.6709 bits (239), Expect = 9.504e-20
Identity = 58/186 (31.18%), Postives = 97/186 (52.15%), Query Frame = 1
Query:    4 LPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLK 561
            + AY V++  TQ Y+ +   + +    D++ M+G A RP  DS  + +++   S+  YY   +   LP+ES     L D  NAEIV  T++N ++A +++ +T LY RM +NP  Y L     +    L +  ++LV      L+ +  +    +     + +LG IASYYYIS+ TI  ++  LK
Sbjct: 1655 MSAYLVVVMDTQFYNGKYHVYEDYPIADMLHMVGLANRPILDSDAKCVVMCQTSKRAYYKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNLQGTTHRH---LSDALSELVELTLKDLENSKCIAVKDEMDTVSL-NLGMIASYYYISYQTIELFSMSLK 1836          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: HELCL_DICDI (Activating signal cointegrator 1 complex subunit 3-like OS=Dictyostelium discoideum GN=ascc3l PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.113e-71
Identity = 127/198 (64.14%), Postives = 165/198 (83.33%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPA+TVIIKGTQIY+PEKG W EL+PLD+ QMLGRAGRP +D  GEGIIIT   EL++YLSL+N QL IESQF+S++AD LNAEIVLG++Q  ++A NW+GYTYLYI M+RNP LY ++ +  ++D  L +RR DLVH+AATIL++N+L+KYDRKSG  Q T+LG++AS+YYI++ ++S Y EHLKP+M DIEL R+
Sbjct:  890 NLPAHTVIIKGTQIYNPEKG-WCELSPLDVTQMLGRAGRPPFDKEGEGIIITSQHELQFYLSLLNTQLSIESQFISRIADNLNAEIVLGSIQTVRDAVNWLGYTYLYICMIRNPPLYEISYDDFEKDPLLEQRRLDLVHSAATILEKNSLIKYDRKSGKLQSTELGKVASHYYITNSSMSIYQEHLKPSMSDIELLRV 1086          

HSP 2 Score: 99.3673 bits (246), Expect = 1.466e-20
Identity = 59/194 (30.41%), Postives = 101/194 (52.06%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQ-----YDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPT 567
            N+ A  V+I GTQ+Y  +   + +    DI+QM+GRAG+ +      +   + +++    +  YY   +N+ LP+ES     L DQ N+EIV  T+   ++A +++ +T+LY R+ +NP  Y L+       + L E  ++LV      L+++N +            +LG IASYYY+ + TI  +   LK T
Sbjct: 1729 NVFAQLVVIMGTQLYQGKDIRYIDYPINDILQMIGRAGKQEGGGVISNKVAKVLLLCHAPKKEYYKMFLNEPLPVESHLDHCLHDQFNSEIVTKTITKKQDALDYLTWTFLYRRLNQNPNYYNLSG---VSHLHLSEHLSELVENTLVELEQSNCITIQDDQDKVSPLNLGIIASYYYLKYQTIELFGSSLKST 1919          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: BRR2_SCHPO (Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyces pombe GN=brr2 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 3.562e-67
Identity = 120/198 (60.61%), Postives = 161/198 (81.31%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPA+TVIIKGTQ+Y PEKG WTEL+P D++QMLGRAGRPQ+D+YGEGIIIT HSEL+YYLSLMNQQLPIESQF+ +LAD LNAE+ LGTV++ ++  +W+GYTYLY+RMLR+PALY + PE   +D  L ++RADL+H+AA +L++  L+ Y+R+SG    T+LG++A+ YY++H +++ YN  L  T   IEL R+
Sbjct:  859 NLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQMLGRAGRPQFDTYGEGIIITAHSELQYYLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRSIEDGVDWLGYTYLYVRMLRSPALYSVGPE-YDDDKYLVQKRADLLHSAAILLEKCKLLVYNRQSGTLTATELGKVAASYYVTHNSMAIYNRLLMQTTSFIELFRV 1055          

HSP 2 Score: 88.5817 bits (218), Expect = 2.588e-17
Identity = 54/179 (30.17%), Postives = 94/179 (52.51%), Query Frame = 1
Query:   19 VIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDIT---LGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTY 546
            VI+ GTQ Y  ++  + +    +++QMLG           + I++T  ++  YY   +N+ LP+ES     L D   +EI   T+++ ++A +W+ ++Y+Y R++ NPA YGL      +DIT   + E  +DLV T    L    L+  D +       +L  IAS+Y I++ T+ T+
Sbjct: 1696 VIVMGTQYYDGKEHRYIDYPISELLQMLGFTASIGSSELSQVILMTVTTKKEYYKKFLNEPLPMESHLQVWLHDAFVSEISTQTIESKQDAVDWLTWSYMYRRLVANPAYYGL------QDITHESVSEFLSDLVETTMNDLSEARLITVDDEDDSCVALNLAMIASHYGITYITMQTF 1868          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: BRR2_YEAST (Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces cerevisiae GN=BRR2 PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 2.558e-57
Identity = 108/198 (54.55%), Postives = 143/198 (72.22%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPA+TVIIKGT +Y PEKG+W +L+P D++QMLGRAGRP+YD++GEGIIIT  S ++YYLS++NQQLPIESQFVSKL D LNAE+V G ++   +A NW+ YTYLY+RML +P LY + P++   D  L + R  LVH+A  IL    LV YD ++   + TDLG IAS +YI+H ++  YN  L      I+L R+
Sbjct:  839 NLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNVQYYLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKV-PDI-SSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIASSFYINHASMDVYNRELDEHTTQIDLFRI 1034          

HSP 2 Score: 67.0106 bits (162), Expect = 8.065e-11
Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 1
Query:   19 VIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDR---------KSGYFQVTDL------GRIASYYYISHGTISTYNEHLKPT 567
            VII GT +Y   +  +   T  ++++M+G A        G+ +I+T H+   YY   + + LP ES     + D LN EI    +Q+ ++  +W  Y+Y Y R+  NP+ YG+  +     I++    ++LV T    L  ++ ++ D            G  + T++      G IAS+Y +S  TI ++   L  T
Sbjct: 1680 VIILGTNLYDGAEHKYMPYTINELLEMVGLASGND-SMAGKVLILTSHNMKAYYKKFLIEPLPTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVR-DTSPHGISV--FLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIISTLSNGLIASHYGVSFFTIQSFVSSLSNT 1873          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: MUG81_SCHPO (Putative helicase mug81 OS=Schizosaccharomyces pombe GN=mug81 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.085e-55
Identity = 104/198 (52.53%), Postives = 141/198 (71.21%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPAY V+IKGTQ+Y P+KG++ +L  LD++Q+ GRAGRPQ++S     IIT H +L +Y+S++ QQ PIES+F  +L D LNAE+ LGTV N  EA +W+GYTYLYIRM RNP +YG+A + L ED  LG +R +LV  AA  L  N ++ Y++K+GY    DLGRIAS YYI++ T+ST N  LK  M + ++  L
Sbjct:  626 NLPAYAVLIKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAVAYIITTHDKLSHYISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVYGIAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVYNKKNGYLIPKDLGRIASNYYINYQTVSTLNNLLKSKMSEADIIAL 823          

HSP 2 Score: 110.538 bits (275), Expect = 6.360e-24
Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTY 546
            N PA+ VI+KGT+ Y  + G + ++   D++QMLGRAGRPQ+D+ G   I     +  +Y   ++   P+ES     L + LNAEI  GT+   + A +++  TY Y R+ +NP  YG   +  K   ++    + LV TA   L+++  + Y      +  T LGRI SYYY+ H TI  +
Sbjct: 1461 NTPAHLVIVKGTEYYDAKIGGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQDIKKSFYKHFLHSGFPVESYLHKVLDNHLNAEIATGTIDCIQGAMDFLTCTYFYRRVHQNPVYYGADGDDQK---SIDTYLSKLVVTAFNELEKSACI-YRVNEETYAPTTLGRIVSYYYLFHTTIRNF 1638          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: HELC1_HUMAN (Activating signal cointegrator 1 complex subunit 3 OS=Homo sapiens GN=ASCC3 PE=1 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 1.552e-54
Identity = 104/195 (53.33%), Postives = 138/195 (70.77%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNE--HLKPTMGDI 579
            NLPA+ VIIKGTQIY  ++G++ +L  LD+MQ+ GRAGRPQ+D +GEGIIIT H +L +YL+L+ Q+ PIESQF+  LAD LNAEI LGTV N +EA  WI YTYLY+RM  NP  YG++ +  + D TL + R  LV      LD+  +++++ ++GYF  TDLGR AS+YYI + TI T+NE      T GDI
Sbjct:  817 NLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDI 1011          

HSP 2 Score: 124.79 bits (312), Expect = 3.259e-28
Identity = 63/195 (32.31%), Postives = 110/195 (56.41%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIEL 585
            N PA+ VIIKGT+ Y  +   + +    D++QM+GRAGRPQ+D  G+ +I+    +  +Y   + +  P+ES  +  L+D LNAEI  GT+ + ++A ++I +TY + R++ NP+ Y L    +  D ++ +  + L+  +   L+ +  ++    +   +    GRIASYYY+ H T+  + + LKP     EL
Sbjct: 1654 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNLGD--VSHD-SVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKDRLKPECSTEEL 1845          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: HELC1_DICDI (Activating signal cointegrator 1 complex subunit 3 OS=Dictyostelium discoideum GN=ascc3 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.740e-51
Identity = 95/198 (47.98%), Postives = 139/198 (70.20%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594
            NLPA+TVIIKGTQ+Y+ + G + +L   D+MQ+ GRAGRPQ+D+ GEG ++T   +L +YLSLM+  +PIES+F++ L D LNAEIVLGTV N  EA NW+ YTYL+IRML+NP +YG+      +D  L E + +++  AA  L++  + ++D +S    +T+LGRIAS+YYI H +I T+NE L   +G  ++  +
Sbjct:  819 NLPAHTVIIKGTQVYNAKNGGFMDLGISDVMQIFGRAGRPQFDTSGEGFLLTSKDKLDHYLSLMSSSMPIESKFITNLEDHLNAEIVLGTVSNVNEAVNWLSYTYLFIRMLQNPLVYGIPSSQRSKDPQLEEFKREIIIRAAKKLEQCKMTRFDEQSENLGMTELGRIASHYYIKHPSIETFNEMLNDQLGQDQVLNI 1016          

HSP 2 Score: 117.472 bits (293), Expect = 5.203e-26
Identity = 56/187 (29.95%), Postives = 114/187 (60.96%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLK 561
            NLPA+ VIIKGT+ +  +   + +    D++QM+GRAGRPQ+D  G+ +++    + ++Y   +    P+ES     L D LNAEIV GT+Q+ + A N++  T+ + R++ +P+ YGL    ++    + +  +DL+ +    L++++ ++ +       ++ +G+IAS+YY+++ T+  +++++K
Sbjct: 1653 NLPAHLVIIKGTEYFDGKTKRYVDFPLTDVLQMIGRAGRPQFDKEGKAMVMVHEPKKQFYKKFLYDPFPVESHLKDFLHDHLNAEIVSGTIQSKQGAINYLVNTFFFRRLVVSPSYYGLEDNSVE---AVNQYLSDLLDSTLADLEQSSCIEINEYDEIIPMS-MGKIASFYYLNYKTVQNFSDNIK 1835          
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: SLH1_YEAST (Antiviral helicase SLH1 OS=Saccharomyces cerevisiae GN=SLH1 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 8.269e-40
Identity = 84/189 (44.44%), Postives = 121/189 (64.02%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSY-GEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKP 564
            NLPA  VIIKGTQ+Y  +KG + +L   D++Q+ GR GRP + S  G GI+ T +  L +Y+SL+ QQ PIES+F SKL D LNAEI LG+V N  EA  W+GYTY+++RM +NP  YG+  E +  D  L ERR  ++  AA  L    ++ +D  S +F   DLGR++S +Y+ + ++  +N+   P
Sbjct:  633 NLPADCVIIKGTQVYDSKKGGFIDLGISDVIQIFGRGGRPGFGSANGTGILCTSNDRLDHYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMFVRMRKNPFTYGIDWEEIANDPQLYERRRKMIVVAARRLHALQMIVFDEVSMHFIAKDLGRVSSDFYLLNESVEIFNQMCDP 821          

HSP 2 Score: 112.079 bits (279), Expect = 2.186e-24
Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 1
Query:    1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTI 537
            NLPA+ VIIKGTQ +  +   + ++   DI+QM+GRAGRP YD+ G  I+ T  S+  +Y   +N   P+ES     L D L AEI  G++ N +EA +++ +T+L+ R   NP  YG+  +     ++  E  + L+ +    L  +  V           T    I+SYYYISH TI
Sbjct: 1469 NLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTAIVYTKESKKMFYKHFLNVGFPVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFRRAHHNPTYYGIEDDTSTAGVS--EHLSSLIDSTLENLRESQCVLLHGDD--IVATPFLSISSYYYISHLTI 1643          
The following BLAST results are available for this feature:
BLAST of FC925210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
U520_HUMAN3.669e-8072.22U5 small nuclear ribonucleoprotein 200 kDa helicas... [more]
U520_DROME5.298e-7969.19Putative U5 small nuclear ribonucleoprotein 200 kD... [more]
U520_CAEEL9.677e-7364.65Putative U5 small nuclear ribonucleoprotein 200 kD... [more]
HELCL_DICDI3.113e-7164.14Activating signal cointegrator 1 complex subunit 3... [more]
BRR2_SCHPO3.562e-6760.61Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyc... [more]
BRR2_YEAST2.558e-5754.55Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces c... [more]
MUG81_SCHPO4.085e-5552.53Putative helicase mug81 OS=Schizosaccharomyces pom... [more]
HELC1_HUMAN1.552e-5453.33Activating signal cointegrator 1 complex subunit 3... [more]
HELC1_DICDI2.740e-5147.98Activating signal cointegrator 1 complex subunit 3... [more]
SLH1_YEAST8.269e-4044.44Antiviral helicase SLH1 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YE02FM1 TF Citrus clementina cDNA clone KN0AAP3YE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925210 ID=FC925210; Name=FC925210; organism=Citrus clementina; type=EST; length=595bp
AACTTGCCTGCTTACACTGTGATCATCAAAGGAACTCAAATTTACCATCC
AGAGAAAGGGGCATGGACAGAGCTCACTCCTCTGGATATCATGCAGATGC
TTGGTCGTGCTGGAAGGCCTCAGTATGATTCATATGGGGAAGGGATTATC
ATTACTGGTCACTCTGAACTTCGCTACTATCTTTCTTTGATGAATCAGCA
GCTCCCTATTGAAAGTCAGTTTGTGTCCAAGCTGGCTGATCAGTTGAATG
CAGAAATTGTCCTTGGAACTGTACAAAATGCTAAAGAAGCCTGCAACTGG
ATTGGATACACTTATCTGTACATTCGAATGTTACGAAATCCTGCACTCTA
TGGTTTGGCACCTGAGGTTCTCAAAGAAGACATAACACTGGGGGAGAGGA
GGGCTGATTTGGTTCATACCGCTGCCACTATCTTGGACAGAAATAATTTG
GTCAAGTATGATAGGAAAAGTGGATATTTCCAAGTTACAGACTTGGGTCG
TATTGCCAGCTATTATTATATAAGTCATGGGACAATATCCACATATAATG
AGCATTTGAAGCCAACAATGGGGGACATAGAGCTTTGTCGGTTGT
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