FC925210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: U520_HUMAN (U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens GN=SNRNP200 PE=1 SV=2) HSP 1 Score: 297.36 bits (760), Expect = 3.669e-80 Identity = 143/198 (72.22%), Postives = 170/198 (85.86%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPA+TVIIKGTQ+Y PEKG WTEL LDI+QMLGRAGRPQYD+ GEGI+IT H EL+YYLSL+NQQLPIESQ VSKL D LNAEIVLG VQNAK+A NW+GY YLYIRMLR+P LYG++ + LK D L +RR DLVHTAA +LD+NNLVKYD+K+G FQVT+LGRIAS+YYI++ T+ TYN+ LKPT+ +IEL R+ Sbjct: 820 NLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRV 1017 HSP 2 Score: 98.9821 bits (245), Expect = 1.915e-20 Identity = 57/186 (30.65%), Postives = 103/186 (55.38%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHL 558 N+ A+ VII TQ Y+ + A+ + D++QM+G A RP D G +I+ S+ ++ + + LP+ES + D NAEIV T++N ++A +++ +T+LY RM +NP Y L + L + ++LV + L+++ + + + + +LG IA+YYYI++ TI ++ L Sbjct: 1655 NVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRH---LSDHLSELVEQTLSDLEQSKCISIEDEMDVAPL-NLGMIAAYYYINYTTIELFSMSL 1836
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: U520_DROME (Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Drosophila melanogaster GN=CG5931 PE=2 SV=4) HSP 1 Score: 293.508 bits (750), Expect = 5.298e-79 Identity = 137/198 (69.19%), Postives = 172/198 (86.87%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPA+TVIIKGTQ+Y+PEKG W EL+ LD++QMLGRAGRPQYD+ GEGI+IT HSEL++YLSL+NQQLPIESQF+SKL D LNAEIVLGTVQ+ ++A NW+GYTYLYIRMLRNP LYG++ + +K D L + RADL+HTAA L+R+ L+KYDRK+G+FQVTDLGRIAS+YY++H T+ TYN+ LK T+ +IEL R+ Sbjct: 820 NLPAHTVIIKGTQVYNPEKGRWVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDMLNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLERSGLIKYDRKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRV 1017 HSP 2 Score: 102.064 bits (253), Expect = 2.262e-21 Identity = 53/183 (28.96%), Postives = 105/183 (57.38%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYN 549 ++ A+ VII TQ Y+ + ++ + D++QM+GRA RP D+ + +++ S+ ++ +N+ LPIES ++ D NAE+V T++N ++A +++ +T+LY R+ +NP Y L + L + ++LV + L+++ + + + +LG IA+YYYI++ TI ++ Sbjct: 1654 SISAHLVIIMDTQFYNGKNHSYEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRH---LSDHLSELVENTLSDLEQSKCISVEDDMDTLPL-NLGMIAAYYYINYTTIELFS 1832
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: U520_CAEEL (Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Caenorhabditis elegans GN=Y46G5A.4 PE=3 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 9.677e-73 Identity = 128/198 (64.65%), Postives = 160/198 (80.81%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPA+TVIIKGTQIY+PEKG WTEL LDIMQMLGRAGRPQYD GEGI+IT HSEL+YYLSLMNQQLP+ESQ VS+L D LNAE+VLGTV + EA NW+GYT+L++RML+NP LYG+ E + D L +RRADL+HTA +LD+ L+KYD++SG Q T+LGRIAS++Y ++ ++ TYN+ L T DI+L R+ Sbjct: 813 NLPAHTVIIKGTQIYNPEKGRWTELGALDIMQMLGRAGRPQYDDRGEGILITNHSELQYYLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVSSVSEATNWLGYTFLFVRMLKNPTLYGITHEQARADPLLEQRRADLIHTACVLLDKAGLIKYDKRSGIIQATELGRIASHFYCTYESMQTYNKLLVETCSDIDLFRI 1010 HSP 2 Score: 96.6709 bits (239), Expect = 9.504e-20 Identity = 58/186 (31.18%), Postives = 97/186 (52.15%), Query Frame = 1 Query: 4 LPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLK 561 + AY V++ TQ Y+ + + + D++ M+G A RP DS + +++ S+ YY + LP+ES L D NAEIV T++N ++A +++ +T LY RM +NP Y L + L + ++LV L+ + + + + +LG IASYYYIS+ TI ++ LK Sbjct: 1655 MSAYLVVVMDTQFYNGKYHVYEDYPIADMLHMVGLANRPILDSDAKCVVMCQTSKRAYYKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIENKQDAIDYLTWTLLYRRMTQNPNYYNLQGTTHRH---LSDALSELVELTLKDLENSKCIAVKDEMDTVSL-NLGMIASYYYISYQTIELFSMSLK 1836
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: HELCL_DICDI (Activating signal cointegrator 1 complex subunit 3-like OS=Dictyostelium discoideum GN=ascc3l PE=3 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 3.113e-71 Identity = 127/198 (64.14%), Postives = 165/198 (83.33%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPA+TVIIKGTQIY+PEKG W EL+PLD+ QMLGRAGRP +D GEGIIIT EL++YLSL+N QL IESQF+S++AD LNAEIVLG++Q ++A NW+GYTYLYI M+RNP LY ++ + ++D L +RR DLVH+AATIL++N+L+KYDRKSG Q T+LG++AS+YYI++ ++S Y EHLKP+M DIEL R+ Sbjct: 890 NLPAHTVIIKGTQIYNPEKG-WCELSPLDVTQMLGRAGRPPFDKEGEGIIITSQHELQFYLSLLNTQLSIESQFISRIADNLNAEIVLGSIQTVRDAVNWLGYTYLYICMIRNPPLYEISYDDFEKDPLLEQRRLDLVHSAATILEKNSLIKYDRKSGKLQSTELGKVASHYYITNSSMSIYQEHLKPSMSDIELLRV 1086 HSP 2 Score: 99.3673 bits (246), Expect = 1.466e-20 Identity = 59/194 (30.41%), Postives = 101/194 (52.06%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQ-----YDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPT 567 N+ A V+I GTQ+Y + + + DI+QM+GRAG+ + + + +++ + YY +N+ LP+ES L DQ N+EIV T+ ++A +++ +T+LY R+ +NP Y L+ + L E ++LV L+++N + +LG IASYYY+ + TI + LK T Sbjct: 1729 NVFAQLVVIMGTQLYQGKDIRYIDYPINDILQMIGRAGKQEGGGVISNKVAKVLLLCHAPKKEYYKMFLNEPLPVESHLDHCLHDQFNSEIVTKTITKKQDALDYLTWTFLYRRLNQNPNYYNLSG---VSHLHLSEHLSELVENTLVELEQSNCITIQDDQDKVSPLNLGIIASYYYLKYQTIELFGSSLKST 1919
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: BRR2_SCHPO (Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyces pombe GN=brr2 PE=1 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 3.562e-67 Identity = 120/198 (60.61%), Postives = 161/198 (81.31%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPA+TVIIKGTQ+Y PEKG WTEL+P D++QMLGRAGRPQ+D+YGEGIIIT HSEL+YYLSLMNQQLPIESQF+ +LAD LNAE+ LGTV++ ++ +W+GYTYLY+RMLR+PALY + PE +D L ++RADL+H+AA +L++ L+ Y+R+SG T+LG++A+ YY++H +++ YN L T IEL R+ Sbjct: 859 NLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQMLGRAGRPQFDTYGEGIIITAHSELQYYLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRSIEDGVDWLGYTYLYVRMLRSPALYSVGPE-YDDDKYLVQKRADLLHSAAILLEKCKLLVYNRQSGTLTATELGKVAASYYVTHNSMAIYNRLLMQTTSFIELFRV 1055 HSP 2 Score: 88.5817 bits (218), Expect = 2.588e-17 Identity = 54/179 (30.17%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 19 VIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDIT---LGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTY 546 VI+ GTQ Y ++ + + +++QMLG + I++T ++ YY +N+ LP+ES L D +EI T+++ ++A +W+ ++Y+Y R++ NPA YGL +DIT + E +DLV T L L+ D + +L IAS+Y I++ T+ T+ Sbjct: 1696 VIVMGTQYYDGKEHRYIDYPISELLQMLGFTASIGSSELSQVILMTVTTKKEYYKKFLNEPLPMESHLQVWLHDAFVSEISTQTIESKQDAVDWLTWSYMYRRLVANPAYYGL------QDITHESVSEFLSDLVETTMNDLSEARLITVDDEDDSCVALNLAMIASHYGITYITMQTF 1868
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: BRR2_YEAST (Pre-mRNA-splicing helicase BRR2 OS=Saccharomyces cerevisiae GN=BRR2 PE=1 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 2.558e-57 Identity = 108/198 (54.55%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPA+TVIIKGT +Y PEKG+W +L+P D++QMLGRAGRP+YD++GEGIIIT S ++YYLS++NQQLPIESQFVSKL D LNAE+V G ++ +A NW+ YTYLY+RML +P LY + P++ D L + R LVH+A IL LV YD ++ + TDLG IAS +YI+H ++ YN L I+L R+ Sbjct: 839 NLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNVQYYLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKV-PDI-SSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIASSFYINHASMDVYNRELDEHTTQIDLFRI 1034 HSP 2 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 53/198 (26.77%), Postives = 93/198 (46.97%), Query Frame = 1 Query: 19 VIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDR---------KSGYFQVTDL------GRIASYYYISHGTISTYNEHLKPT 567 VII GT +Y + + T ++++M+G A G+ +I+T H+ YY + + LP ES + D LN EI +Q+ ++ +W Y+Y Y R+ NP+ YG+ + I++ ++LV T L ++ ++ D G + T++ G IAS+Y +S TI ++ L T Sbjct: 1680 VIILGTNLYDGAEHKYMPYTINELLEMVGLASGND-SMAGKVLILTSHNMKAYYKKFLIEPLPTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVR-DTSPHGISV--FLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIISTLSNGLIASHYGVSFFTIQSFVSSLSNT 1873
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: MUG81_SCHPO (Putative helicase mug81 OS=Schizosaccharomyces pombe GN=mug81 PE=1 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 4.085e-55 Identity = 104/198 (52.53%), Postives = 141/198 (71.21%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPAY V+IKGTQ+Y P+KG++ +L LD++Q+ GRAGRPQ++S IIT H +L +Y+S++ QQ PIES+F +L D LNAE+ LGTV N EA +W+GYTYLYIRM RNP +YG+A + L ED LG +R +LV AA L N ++ Y++K+GY DLGRIAS YYI++ T+ST N LK M + ++ L Sbjct: 626 NLPAYAVLIKGTQLYDPQKGSFVDLGVLDVLQIFGRAGRPQFESSAVAYIITTHDKLSHYISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTNIDEAVSWLGYTYLYIRMRRNPLVYGIAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVYNKKNGYLIPKDLGRIASNYYINYQTVSTLNNLLKSKMSEADIIAL 823 HSP 2 Score: 110.538 bits (275), Expect = 6.360e-24 Identity = 64/182 (35.16%), Postives = 99/182 (54.40%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTY 546 N PA+ VI+KGT+ Y + G + ++ D++QMLGRAGRPQ+D+ G I + +Y ++ P+ES L + LNAEI GT+ + A +++ TY Y R+ +NP YG + K ++ + LV TA L+++ + Y + T LGRI SYYY+ H TI + Sbjct: 1461 NTPAHLVIVKGTEYYDAKIGGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFVQDIKKSFYKHFLHSGFPVESYLHKVLDNHLNAEIATGTIDCIQGAMDFLTCTYFYRRVHQNPVYYGADGDDQK---SIDTYLSKLVVTAFNELEKSACI-YRVNEETYAPTTLGRIVSYYYLFHTTIRNF 1638
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: HELC1_HUMAN (Activating signal cointegrator 1 complex subunit 3 OS=Homo sapiens GN=ASCC3 PE=1 SV=3) HSP 1 Score: 212.231 bits (539), Expect = 1.552e-54 Identity = 104/195 (53.33%), Postives = 138/195 (70.77%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNE--HLKPTMGDI 579 NLPA+ VIIKGTQIY ++G++ +L LD+MQ+ GRAGRPQ+D +GEGIIIT H +L +YL+L+ Q+ PIESQF+ LAD LNAEI LGTV N +EA WI YTYLY+RM NP YG++ + + D TL + R LV LD+ +++++ ++GYF TDLGR AS+YYI + TI T+NE T GDI Sbjct: 817 NLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTNVEEAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDI 1011 HSP 2 Score: 124.79 bits (312), Expect = 3.259e-28 Identity = 63/195 (32.31%), Postives = 110/195 (56.41%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIEL 585 N PA+ VIIKGT+ Y + + + D++QM+GRAGRPQ+D G+ +I+ + +Y + + P+ES + L+D LNAEI GT+ + ++A ++I +TY + R++ NP+ Y L + D ++ + + L+ + L+ + ++ + + GRIASYYY+ H T+ + + LKP EL Sbjct: 1654 NFPAHLVIIKGTEYYDGKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNLGD--VSHD-SVNKFLSHLIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKDRLKPECSTEEL 1845
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: HELC1_DICDI (Activating signal cointegrator 1 complex subunit 3 OS=Dictyostelium discoideum GN=ascc3 PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.740e-51 Identity = 95/198 (47.98%), Postives = 139/198 (70.20%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKPTMGDIELCRL 594 NLPA+TVIIKGTQ+Y+ + G + +L D+MQ+ GRAGRPQ+D+ GEG ++T +L +YLSLM+ +PIES+F++ L D LNAEIVLGTV N EA NW+ YTYL+IRML+NP +YG+ +D L E + +++ AA L++ + ++D +S +T+LGRIAS+YYI H +I T+NE L +G ++ + Sbjct: 819 NLPAHTVIIKGTQVYNAKNGGFMDLGISDVMQIFGRAGRPQFDTSGEGFLLTSKDKLDHYLSLMSSSMPIESKFITNLEDHLNAEIVLGTVSNVNEAVNWLSYTYLFIRMLQNPLVYGIPSSQRSKDPQLEEFKREIIIRAAKKLEQCKMTRFDEQSENLGMTELGRIASHYYIKHPSIETFNEMLNDQLGQDQVLNI 1016 HSP 2 Score: 117.472 bits (293), Expect = 5.203e-26 Identity = 56/187 (29.95%), Postives = 114/187 (60.96%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLK 561 NLPA+ VIIKGT+ + + + + D++QM+GRAGRPQ+D G+ +++ + ++Y + P+ES L D LNAEIV GT+Q+ + A N++ T+ + R++ +P+ YGL ++ + + +DL+ + L++++ ++ + ++ +G+IAS+YY+++ T+ +++++K Sbjct: 1653 NLPAHLVIIKGTEYFDGKTKRYVDFPLTDVLQMIGRAGRPQFDKEGKAMVMVHEPKKQFYKKFLYDPFPVESHLKDFLHDHLNAEIVSGTIQSKQGAINYLVNTFFFRRLVVSPSYYGLEDNSVE---AVNQYLSDLLDSTLADLEQSSCIEINEYDEIIPMS-MGKIASFYYLNYKTVQNFSDNIK 1835
BLAST of FC925210 vs. ExPASy Swiss-Prot
Match: SLH1_YEAST (Antiviral helicase SLH1 OS=Saccharomyces cerevisiae GN=SLH1 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 8.269e-40 Identity = 84/189 (44.44%), Postives = 121/189 (64.02%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSY-GEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTISTYNEHLKP 564 NLPA VIIKGTQ+Y +KG + +L D++Q+ GR GRP + S G GI+ T + L +Y+SL+ QQ PIES+F SKL D LNAEI LG+V N EA W+GYTY+++RM +NP YG+ E + D L ERR ++ AA L ++ +D S +F DLGR++S +Y+ + ++ +N+ P Sbjct: 633 NLPADCVIIKGTQVYDSKKGGFIDLGISDVIQIFGRGGRPGFGSANGTGILCTSNDRLDHYVSLITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMFVRMRKNPFTYGIDWEEIANDPQLYERRRKMIVVAARRLHALQMIVFDEVSMHFIAKDLGRVSSDFYLLNESVEIFNQMCDP 821 HSP 2 Score: 112.079 bits (279), Expect = 2.186e-24 Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = 1 Query: 1 NLPAYTVIIKGTQIYHPEKGAWTELTPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGLAPEVLKEDITLGERRADLVHTAATILDRNNLVKYDRKSGYFQVTDLGRIASYYYISHGTI 537 NLPA+ VIIKGTQ + + + ++ DI+QM+GRAGRP YD+ G I+ T S+ +Y +N P+ES L D L AEI G++ N +EA +++ +T+L+ R NP YG+ + ++ E + L+ + L + V T I+SYYYISH TI Sbjct: 1469 NLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRPAYDTTGTAIVYTKESKKMFYKHFLNVGFPVESSLHKVLDDHLGAEITSGSITNKQEALDFLSWTFLFRRAHHNPTYYGIEDDTSTAGVS--EHLSSLIDSTLENLRESQCVLLHGDD--IVATPFLSISSYYYISHLTI 1643 The following BLAST results are available for this feature:
BLAST of FC925210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925210 ID=FC925210; Name=FC925210; organism=Citrus clementina; type=EST; length=595bpback to top |