FC925218
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925218 vs. ExPASy Swiss-Prot
Match: KCO1_ARATH (Calcium-activated outward-rectifying potassium channel 1 OS=Arabidopsis thaliana GN=KCO1 PE=1 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 1.196e-55 Identity = 120/230 (52.17%), Postives = 154/230 (66.96%), Query Frame = 2 Query: 62 MASNGANQPLL-SGFVDSTSQTNNKDA----PKRRRLRRCRSAPQTDVAALD---INEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIETHKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFYCV 727 M+S+ A PLL + +D+ +Q N ++ ++RRLRR RSAP+ D D I+E +F PN +RV+++LA YL G+L FY V QI G KT+ ++D++YFCIVTMTTVGYGDLVPNS S+LL+CAFVF+GM LVG LS+AADYLV+KQE LLV+A H Q GPTDILKE+ T+K+RYKC GTIFLV+VEKM + AFYCV Sbjct: 1 MSSDAARTPLLPTEKIDTMAQDFNLNSRTSSSRKRRLRRSRSAPRGDCMYNDDVKIDEPPPHPSKIPMFSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAFHLRQSFGPTDILKELHTNKLRYKCYATCLVLVVLFIVGTIFLVMVEKMPVISAFYCV 230
BLAST of FC925218 vs. ExPASy Swiss-Prot
Match: KCO5_ARATH (Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic OS=Arabidopsis thaliana GN=KCO5 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.896e-18 Identity = 62/216 (28.70%), Postives = 103/216 (47.69%), Query Frame = 2 Query: 107 DSTSQTNNKDAPKRRRLRRCRSAPQTDVAALDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVN-SQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKAL--------HRYQKVGPTDILKEIE--THKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFY 721 DS S N+ + R L R R+AP V D+ K S K ++ + L YL G +S Y+ N G++T+ ++D++YFCIVTM T+GYGD+ P + +K+ + FV G G + + LS +Y++D QE +++ + H + + D + + E ++R K G + L VE++ FVD+ Y Sbjct: 68 DSDSDETNRFLSQTRPLHRSRTAPAM-VIIKDLRTKPPETKKPSPVSKSI--IRQAIFLLIVYLTLG-VSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTRQHHQHHHHHRFSAKDYIIDFEKGRMRIRMKVCLALCVVVLCIGVGALVLHFVEELGFVDSVY 279
BLAST of FC925218 vs. ExPASy Swiss-Prot
Match: KCO6_ARATH (Probable calcium-activated outward-rectifying potassium channel 6 OS=Arabidopsis thaliana GN=KCO6 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 58/195 (29.74%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 155 LRRCRSAPQTDVAA---LDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQE-ILLVKALHRYQKVGPTDILKEIE--THKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFY 721 L R ++AP V I +KD T S S+ ++ L YL G L ++ +T+ ++D +YFCIVTM T+GYGD+ PNSVV+KL S FV G G + + LS Y++D QE +L A R + + +++ ++R K G + +E++ ++D+FY Sbjct: 118 LHRSKTAPAMAVINDLHHPIRQKDPTETSRSVV-------RQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTKLFSIMFVLVGFGFIDILLSGMVSYVLDLQESYMLDSAKRRDEPEKRRSYIIDVKKGRMRIRLKVALALGVVVLCIAVGVGIMHFIEEIGWLDSFY 305
BLAST of FC925218 vs. ExPASy Swiss-Prot
Match: KCO2_ARATH (Probable calcium-activated outward-rectifying potassium channel 2 OS=Arabidopsis thaliana GN=KCO2 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16 Identity = 49/158 (31.01%), Postives = 80/158 (50.63%), Query Frame = 2 Query: 269 RVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKA-------LHRYQKVGPTDILKEIETHKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFY 721 + + L YL G L ++ +T+ ++D++YFCIVTM T+GYGD+ P+SVV+KL S FV G G + + LS Y++D QE +++ L+ KV I + ++R K G + + VEK+ ++D+FY Sbjct: 148 QAVALLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSIFFVLVGFGFMDILLSGMVTYVLDLQENYMLETARNESLNLNDRDKVRSYIIDVKKGRMRIRLKVGLALGVVVLCLGFGVLIMHFVEKIGWLDSFY 305
BLAST of FC925218 vs. ExPASy Swiss-Prot
Match: KCO4_ARATH (Putative outward-rectifying potassium channel 4 OS=Arabidopsis thaliana GN=KCO4 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 40/149 (26.85%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 275 LVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIETHKVRYKCXXXXXXXXXXXXXGTIFLVVVEKMSFVDAFY 721 ++ L YL G ++ Q G +TN +D+ YF IVT +TVGYGD+VP++ +K+L+ V TG+ + L++ +++ QE ++ +++ + D + E ++++K G +FL V E++ ++D+ Y Sbjct: 39 MILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYFSIVTFSTVGYGDIVPSTSTTKILTIVLVSTGVVFLDYLLNRVVSHVLSLQENAILDRINKTRNRAIRDHIAEDGKIRLKWKLCLAFCAVGLCVGSGALFLHVFERLDWLDSVY 187 The following BLAST results are available for this feature:
BLAST of FC925218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925218 ID=FC925218; Name=FC925218; organism=Citrus clementina; type=EST; length=728bpback to top |