FC925219

Overview
NameFC925219
Unique NameFC925219
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:1..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.429e-21
Identity = 56/110 (50.91%), Postives = 72/110 (65.45%), Query Frame = 2
Query:  395 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSQYYVPNKDGVLLGP 715
            D+   +A QL   ++LPM ++T  EL + EI+ K GPGA L  SDIA+ L TKN DAP+MLDRILRLLASYS++ CS   L      RLY L SV ++   N+DGV + P
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSP 125          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.184e-21
Identity = 53/110 (48.18%), Postives = 74/110 (67.27%), Query Frame = 2
Query:  395 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSQYYVPNKDGVLLGP 715
            D++F +A QLA  ++LPM +++  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+LRLLA+YSV+ C+L         RLYSL  V +    N DGV + P
Sbjct:   13 DEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAP 122          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  395 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSQYYVPNKDGVLLGP 715
            +++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CS   L      RLY L  V ++   N+DGV + P
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSP 126          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  395 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSQYYVPNKDGVLLGP 715
            +++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CS   L      RLY L  V ++   N+DGV + P
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSP 126          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.264e-21
Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  395 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSQYYVPNKDGVLLGP 715
            D++F +A QLA  ++LPM ++   EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+ RLLA+YSV+ C+L         RLYSL  V ++   N DGV + P
Sbjct:   13 DEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAP 122          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 2
Query:  395 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSQYYVPNKDGVLLGP 715
            D+   +A QL   ++LPM ++T  EL + EI+ K GPGA L  SDIA+ L TKN +AP+MLDRILRLLASYS++ CS   L      RLY L SV ++   N+DGV + P
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSP 125          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.064e-20
Identity = 48/115 (41.74%), Postives = 78/115 (67.83%), Query Frame = 2
Query:  380 VDGERDQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVEC---SLDASGARRLYSLNSVSQYYVPNKDGVLLGP 715
            ++ + +++F +A QLA  ++LPM +++  EL + E++ K G GA +  +++AAQLLT N +A +MLDRILRLL SY+++EC   +L   G +RLY L  V ++   N+DGV + P
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAP 124          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20
Identity = 52/108 (48.15%), Postives = 74/108 (68.52%), Query Frame = 2
Query:  389 ERDQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECS---LDASGARRLYSLNSVSQYYVPNKDGV 703
            E +++   A +LA  ++LPM +++  EL + E++ K GPGA +  S++AAQL T+N DAP+MLDRILRLLASYSV+ C+   L   G  RLYSL  V ++   N+DGV
Sbjct:   15 EEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGV 122          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.843e-20
Identity = 49/115 (42.61%), Postives = 75/115 (65.22%), Query Frame = 2
Query:  380 VDGERDQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVEC---SLDASGARRLYSLNSVSQYYVPNKDGVLLGP 715
            ++ + +++F +A QLA  ++LPM +++  EL + E++ K G GA +   D+AAQL T N DA +MLDRILRLL SY+++EC   +L   G  RLY L  V ++   N+DGV + P
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTTNPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAP 124          
BLAST of FC925219 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.024e-19
Identity = 49/110 (44.55%), Postives = 73/110 (66.36%), Query Frame = 2
Query:  395 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLD---ASGARRLYSLNSVSQYYVPNKDGVLLGP 715
            +++  +A  LA  ++LPM +++  EL + E++ K GPGA +  S++AAQL T N +AP+MLDRILRLLA+YSV++C L+     G  RLY L  V ++   N DGV + P
Sbjct:    4 EEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAP 113          
The following BLAST results are available for this feature:
BLAST of FC925219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
COMT3_POPKI1.429e-2150.91Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CAPAN3.184e-2148.18Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_POPTM4.159e-2149.09Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_POPKI4.159e-2149.09Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_CAPCH9.264e-2147.27Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT2_POPTM1.580e-2050.00Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT2_OCIBA2.064e-2041.74Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_CATRO3.520e-2048.15Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_OCIBA7.843e-2042.61Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_COFCA1.024e-1944.55Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YE07FM1 TF Citrus clementina cDNA clone KN0AAP3YE07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925219 ID=FC925219; Name=FC925219; organism=Citrus clementina; type=EST; length=715bp
CACTTGCGTTTCTGTTAACTACATTCTCACTTCGGATTCGGAATCGAAAC
GAAACGTTTTTTTTTTTCCTTTTCCTTTAGAGTGAGGAGGAGCCTGTTTC
GTTAACGTTTTAGAATTTTTTTTCATAACGATGGCGGCGGAGAAATGGGT
ACTGATGGTGACGGCGCAGACGCCGACGAACATAGCTGTGATAAAGTACT
GGGGGAAGCGAGACGAAACCCTAATTTTGCCTGTCAATGATAGCATCAGC
GTCACCCTTGATCCCGATCACCTCTGTACTACCACGACCGTTGCCGTCAG
TCCTAGCTTTGACCAAGATCGTATGTGGCTCAATGGCAAAGCGTAGGAGA
AATTCAAGAAACTTAAAATGGATTCTATAGTTGATGGAGAAAGAGACCAA
AGCTTTGCATATGCTAATCAATTGGCGATGGGTACAATGCTACCCATGGC
CATTCAAACGGTGTATGAGCTAGGCATTTTCGAGATCCTAGACAAAGTTG
GTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAGCCCAATTGCTCACC
AAGAACAAAGACGCACCCATGATGCTGGATCGGATTCTCAGGCTTCTGGC
TAGCTACAGCGTTGTTGAATGCTCACTTGATGCTTCTGGTGCCCGGAGAC
TATATAGTTTGAATTCTGTCTCCCAATACTATGTGCCTAACAAAGATGGC
GTCTTACTAGGACCC
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