FC925224

Overview
NameFC925224
Unique NameFC925224
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length261
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5292 contig Ccv1_Contig5292:810..1071. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC925224 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 4.003e-28
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 1 
Query:   46 KEENVCHSKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAVEKPITLKPGEEWKGRLELSGVPSSY 261
            K++    +K+GLPDAVVWNPWDKKAKAM DFGD EYK+MLCVE AAVEKPITLKPGEEW+GR+ LS VPSSY
Sbjct:  245 KKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEPAAVEKPITLKPGEEWRGRIALSAVPSSY 316
The following BLAST results are available for this feature:
BLAST of FC925224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
AAPC_CENCI4.003e-2877.78Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP3YE09FM1 TF Citrus clementina cDNA clone KN0AAP3YE09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925224 ID=FC925224; Name=FC925224; organism=Citrus clementina; type=EST; length=261bp
GATATACCTCACTTTTCCTACAAAGATTGCAATTCTGGATCATGAAAAGA
AGAGAACGTTTGTCATTCTAAAGATGGGCTTCCAGATGCTGTGGTGTGGA
ATCCATGGGATAAGAAAGCAAAAGCTATGGCTGATTTTGGGGATGATGAG
TATAAGCATATGTTGTGCGTGGAGGCAGCTGCTGTTGAAAAACCGATTAC
ATTGAAACCTGGGGAGGAGTGGAAAGGAAGGCTGGAACTTTCTGGTGTTC
CGTCTAGTTAT
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