FC925239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 1.402e-67 Identity = 122/164 (74.39%), Postives = 140/164 (85.37%), Query Frame = 1 Query: 46 ESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 E+G + + S+ S K+GMVLPFEP+S+TFD+VVYSVDMPQ+MK QG ED+LVLL GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI G+I+ISGYPKKQETFARISGYCEQNDIHSP+VT+YESL YSAWLRLP +V+ +TRKMF+ Sbjct: 801 ENGEVSSQITSTDGGDSISESQNNKKGMVLPFEPHSITFDDVVYSVDMPQEMKEQGAGEDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGEIKISGYPKKQETFARISGYCEQNDIHSPYVTVYESLVYSAWLRLPQDVDEKTRKMFV 964 HSP 2 Score: 26.5646 bits (57), Expect = 1.402e-67 Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 518 KPERCLFEEVMELVELKPLRQS 583 K + +EVMELVEL PLR + Sbjct: 958 KTRKMFVDEVMELVELGPLRSA 979
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 2.172e-65 Identity = 122/179 (68.16%), Postives = 139/179 (77.65%), Query Frame = 1 Query: 1 QDNTFGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 Q N G + + S N N+ +S A+ S P +RGMVLPF P SLTFD + YSVDMPQ+MK G+ ED+L LL GVSG+FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI G+I ISGYPKKQETFAR+SGYCEQNDIHSP VT+ ESL +SAWLRLP +V+S TRKMFI Sbjct: 816 QANINGNVLDVDTMASSTNLAIVDNTETSSEIADNSQPTQRGMVLPFAPLSLTFDNIKYSVDMPQEMKAHGIVEDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKKQETFARVSGYCEQNDIHSPQVTVSESLLFSAWLRLPKDVDSNTRKMFI 994 HSP 2 Score: 29.261 bits (64), Expect = 2.172e-65 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 527 RCLFEEVMELVELKPLRQS 583 + EEVMELVELKPLR + Sbjct: 991 KMFIEEVMELVELKPLRDA 1009
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 2.172e-65 Identity = 124/177 (70.06%), Postives = 143/177 (80.79%), Query Frame = 1 Query: 7 NTFGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 N G V+L G + + N ++++ E + +KRGMVLPF P S+TFD + YSVDMPQ+MK +GV ED+L+LL GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI GDI ISGYPKKQETFARI+GYCEQNDIHSP VT+YESL YSAWLRLP EV+SE RKMF+ Sbjct: 798 NRTGENVELLTLG-TDSQNSPSDANAGRGEITGADTRKRGMVLPFTPLSITFDNIRYSVDMPQEMKDKGVTEDRLLLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDISISGYPKKQETFARIAGYCEQNDIHSPHVTVYESLLYSAWLRLPSEVDSEARKMFV 973 HSP 2 Score: 23.0978 bits (48), Expect = 2.172e-65 Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 539 EEVMELVELKPLR 577 EEVMELVEL LR Sbjct: 974 EEVMELVELTSLR 986
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 3.087e-64 Identity = 119/179 (66.48%), Postives = 138/179 (77.09%), Query Frame = 1 Query: 1 QDNTFGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 Q N G + + S N ++ + A+ S P +RGMVLPF P SLTF+++ YSVDMPQ+MK G+ ED+L LL GVSG FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI G+I ISGYPKKQETFAR+SGYCEQNDIHSP VT+ ESL +SAWLRLP +V+S TRKMFI Sbjct: 820 QANINGNVLDVDTMASSNNLAIVGSTGTGSEIADNSQPTQRGMVLPFTPLSLTFEDIKYSVDMPQEMKAHGIVEDRLELLKGVSGCFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNISISGYPKKQETFARVSGYCEQNDIHSPQVTVSESLLFSAWLRLPKDVDSNTRKMFI 998 HSP 2 Score: 29.261 bits (64), Expect = 3.087e-64 Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 527 RCLFEEVMELVELKPLRQS 583 + EEVMELVELKPLR + Sbjct: 995 KMFIEEVMELVELKPLRDA 1013
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 6.845e-64 Identity = 123/177 (69.49%), Postives = 136/177 (76.84%), Query Frame = 1 Query: 7 NTFGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 N G V+L+ G + S E +K+GMVLPF P S+TFD V YSVDMPQ+MK +GV EDKL+LL GVSGAFRPGVLTALMGVSG GKTTLMDVLAGRKTGGYI GDIRISGYPK QETFARISGYCEQNDIHSP VT+YESL YSAWLRLP EV+ + RKMF+ Sbjct: 800 NRTGANVELATRGSAAT------SDGGSVEIRKDGNRKKGMVLPFTPLSITFDNVKYSVDMPQEMKDRGVTEDKLLLLKGVSGAFRPGVLTALMGVSGRGKTTLMDVLAGRKTGGYIEGDIRISGYPKNQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPAEVDEKQRKMFV 970 HSP 2 Score: 23.483 bits (49), Expect = 6.845e-64 Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 2 Query: 518 KPERCLFEEVMELVELKPLRQS 583 K + +EVM+LVEL LR S Sbjct: 964 KQRKMFVDEVMDLVELNSLRGS 985
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 7.928e-64 Identity = 118/165 (71.52%), Postives = 138/165 (83.64%), Query Frame = 1 Query: 55 NDNRERNSSSSLTEAE----ASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 ++N E SS +T + AS KK+GMVLPF+P+S+TFDEVVYSVDMP +M+ G +++LVLL VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI G I+ISGYPKKQ+TFARISGYCEQNDIHSP+VT++ESL YSAWLRLP +VN E R MF+ Sbjct: 801 SENNESESSPQITSTQEGDSASENKKKGMVLPFDPHSITFDEVVYSVDMPPEMRESGTSDNRLVLLKSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGSIKISGYPKKQDTFARISGYCEQNDIHSPYVTVFESLVYSAWLRLPQDVNEEKRMMFV 965
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 7.928e-64 Identity = 122/164 (74.39%), Postives = 134/164 (81.71%), Query Frame = 1 Query: 46 ESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 E +D E S+ S EA KKRGMVLPFEP+S+TFD VVYSVDMPQ+M QG ED+LVLL GV+GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI G+I ISGYPK Q+TFARISGYCEQ DIHSP VT+YESL YSAWLRLP EV+ RK+FI Sbjct: 789 EPASDETELQSARSEGVVEAGANKKRGMVLPFEPHSITFDNVVYSVDMPQEMIEQGTQEDRLVLLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITISGYPKNQQTFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPKEVDKNKRKIFI 952
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 5.139e-63 Identity = 118/155 (76.13%), Postives = 136/155 (87.74%), Query Frame = 1 Query: 73 NSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 + +S + A++S +K GMVLPF P S++F++V YSVDMP+ MK QG+ ED+L+LL GVSG+FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI GDIRISGYPKKQETFARISGYCEQNDIHSP VT+YESL +SAWLRLP EV+SE RKMFI Sbjct: 826 DQNSGINSADSSASRK-GMVLPFAPLSISFNDVRYSVDMPEAMKAQGITEDRLLLLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGYPKKQETFARISGYCEQNDIHSPHVTVYESLVFSAWLRLPSEVDSEARKMFI 979
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 1.653e-62 Identity = 120/173 (69.36%), Postives = 136/173 (78.61%), Query Frame = 1 Query: 19 GTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 G V LS+ G + + S + + +RGMVLPF P SL+FD V YSVDMPQ+MK QGV +D+L LL GVSG+FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI G I ISGYPKKQETFAR+SGYCEQNDIHSP VT+YESL +SAWLRLP +V+S TRKMFI Sbjct: 816 GDVHLSS-GSTRRPMGNGTENDSTIVDDDTEVTQRGMVLPFTPLSLSFDNVRYSVDMPQEMKAQGVADDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLFSAWLRLPEDVDSNTRKMFI 987 HSP 2 Score: 26.1794 bits (56), Expect = 1.653e-62 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 527 RCLFEEVMELVELKPLRQS 583 + EEVMELVELK LR + Sbjct: 984 KMFIEEVMELVELKSLRDA 1002
BLAST of FC925239 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 1.653e-62 Identity = 120/173 (69.36%), Postives = 136/173 (78.61%), Query Frame = 1 Query: 19 GTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTIYESLFYSAWLRLPPEVNSETRKMFI 537 G V LS+ G + + S + + +RGMVLPF P SL+FD V YSVDMPQ+MK QGV +D+L LL GVSG+FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI G I ISGYPKKQETFAR+SGYCEQNDIHSP VT+YESL +SAWLRLP +V+S TRKMFI Sbjct: 816 GDVHLSS-GSTRRPMGNGTENDSTIVDDDTEVTQRGMVLPFTPLSLSFDNVRYSVDMPQEMKAQGVADDRLELLKGVSGSFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKKQETFARVSGYCEQNDIHSPQVTVYESLLFSAWLRLPEDVDSNTRKMFI 987 HSP 2 Score: 26.1794 bits (56), Expect = 1.653e-62 Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2 Query: 527 RCLFEEVMELVELKPLRQS 583 + EEVMELVELK LR + Sbjct: 984 KMFIEEVMELVELKSLRDA 1002 The following BLAST results are available for this feature:
BLAST of FC925239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925239 ID=FC925239; Name=FC925239; organism=Citrus clementina; type=EST; length=585bpback to top |