FC925240

Overview
NameFC925240
Unique NameFC925240
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length500
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14613 contig Ccv1_Contig14613:1..500. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C64_ARATH (Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.472e-32
Identity = 63/95 (66.32%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  119 ILIVSSNIPAALLCLQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            I+++  N+      +QVSRSIGDVYLK++E+NREPLYAKFRLR PF KP+LS+EP+I+ H L+P DQF+I ASDGLWEH+SNQ+AVDIVQNHP +
Sbjct:  214 IVVLKHNVWRVKGIIQVSRSIGDVYLKRSEFNREPLYAKFRLRSPFSKPLLSAEPAITVHTLEPHDQFIICASDGLWEHMSNQEAVDIVQNHPRN 308          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C46_ARATH (Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.923e-32
Identity = 62/95 (65.26%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  119 ILIVSSNIPAALLCLQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            I+++  N+      +Q+SRSIGDVYLKKAE+N+EPLY K+R+REPF++PILS EP+I+ HE+QP D+FLIFASDGLWE +SNQ+AVDIVQNHP +
Sbjct:  212 IVMLKHNVWRVKGLIQISRSIGDVYLKKAEFNKEPLYTKYRIREPFKRPILSGEPTITEHEIQPQDKFLIFASDGLWEQMSNQEAVDIVQNHPRN 306          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C79_ARATH (Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 3.279e-32
Identity = 64/95 (67.37%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  119 ILIVSSNIPAALLCLQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            I+++  N+      +QVSRSIGDVYLKK+E+N+EPLY K+RLREP ++PILS EPSI+ H+LQP DQFLIFASDGLWE LSNQ+AV+IVQNHP +
Sbjct:  215 IVVLKHNVWRVKGIIQVSRSIGDVYLKKSEFNKEPLYTKYRLREPMKRPILSWEPSITVHDLQPDDQFLIFASDGLWEQLSNQEAVEIVQNHPRN 309          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C60_ORYSJ (Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 9.542e-32
Identity = 65/95 (68.42%), Postives = 77/95 (81.05%), Query Frame = 2
Query:  119 ILIVSSNIPAALLCLQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            I+++  N+      +QV RSIGD YLK++E+NREPLYAKFRLREPF KPILSSEPSIS   LQP DQFLIFASDGLWEHL+NQ+AVDIV + P +
Sbjct:  214 IVVLKHNVWRVKGLIQVCRSIGDAYLKRSEFNREPLYAKFRLREPFHKPILSSEPSISVQPLQPHDQFLIFASDGLWEHLTNQEAVDIVHSSPRN 308          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C28_ORYSJ (Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.246e-31
Identity = 61/95 (64.21%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  119 ILIVSSNIPAALLCLQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            I+++  N+      +Q+SRSIGDVYLK+ EYNREPL++KFRLRE F++PILSSEP+I+ H++QP D F+IFASDGLWEHLSNQ+AVD+VQN+P +
Sbjct:  215 IVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLHSKFRLRETFKRPILSSEPAIAVHQIQPNDHFVIFASDGLWEHLSNQEAVDLVQNNPRN 309          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C72_ORYSJ (Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 8.931e-30
Identity = 58/95 (61.05%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  119 ILIVSSNIPAALLCLQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            I+++  N+      +Q++RSIGDVYLKK E+NREPL++KFRL+E FR+P+LSSEP+I  H+LQ  DQF+IFASDGLWEH+SNQ+AVD+VQ++P +
Sbjct:  216 IVVLKHNVWRVKGIIQITRSIGDVYLKKPEFNREPLHSKFRLQETFRRPLLSSEPAIVVHQLQTTDQFIIFASDGLWEHISNQEAVDLVQHNPRN 310          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C38_ARATH (Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 8.359e-28
Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 2
Query:  161 LQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            +QVSRSIGD YLKKAE+NREPL AKFR+ E F KPIL +EP+I+ H++ P DQFLIFASDGLWEHLSNQ+AVDIV   P +
Sbjct:  230 IQVSRSIGDAYLKKAEFNREPLLAKFRVPEVFHKPILRAEPAITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNTCPRN 310          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C48_ARATH (Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.689e-26
Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 2
Query:  161 LQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            +QVSRSIGD YLK+AE+N+EPL  KFR+ E F KPI+ +EP+I+ H++ P DQFLIFASDGLWEHLSNQ+AVDIV + P +
Sbjct:  231 IQVSRSIGDAYLKRAEFNQEPLLPKFRVPERFEKPIMRAEPTITVHKIHPEDQFLIFASDGLWEHLSNQEAVDIVNSCPRN 311          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C67_ARATH (Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.022e-25
Identity = 56/93 (60.22%), Postives = 70/93 (75.27%), Query Frame = 2
Query:  119 ILIVSSNIPAALLCLQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHP 397
            IL++   +      +QV+RSIGD YLK+AE+NREPL  KFRL E F KPILS++PS++   L P D+F+I ASDGLWEHLSNQ+AVDIV N P
Sbjct:  203 ILVMKHRLWRVKGVIQVTRSIGDAYLKRAEFNREPLLPKFRLPEHFTKPILSADPSVTITRLSPQDEFIILASDGLWEHLSNQEAVDIVHNSP 295          
BLAST of FC925240 vs. ExPASy Swiss-Prot
Match: P2C42_ARATH (Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.071e-25
Identity = 48/81 (59.26%), Postives = 67/81 (82.72%), Query Frame = 2
Query:  161 LQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHS 403
            +QVSRSIGD+Y+K+ E+N+EP+  KFR+ EP ++P++S+ P+I +H L P D FLIFASDGLWEHL+N+ AV+IV NHP +
Sbjct:  231 IQVSRSIGDMYMKRPEFNKEPISQKFRIAEPMKRPLMSATPTILSHPLHPNDSFLIFASDGLWEHLTNEKAVEIVHNHPRA 311          
The following BLAST results are available for this feature:
BLAST of FC925240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2C64_ARATH1.472e-3266.32Probable protein phosphatase 2C 64 OS=Arabidopsis ... [more]
P2C46_ARATH1.923e-3265.26Probable protein phosphatase 2C 46 OS=Arabidopsis ... [more]
P2C79_ARATH3.279e-3267.37Probable protein phosphatase 2C 79 OS=Arabidopsis ... [more]
P2C60_ORYSJ9.542e-3268.42Probable protein phosphatase 2C 60 OS=Oryza sativa... [more]
P2C28_ORYSJ1.246e-3164.21Probable protein phosphatase 2C 28 OS=Oryza sativa... [more]
P2C72_ORYSJ8.931e-3061.05Probable protein phosphatase 2C 72 OS=Oryza sativa... [more]
P2C38_ARATH8.359e-2871.60Probable protein phosphatase 2C 38 OS=Arabidopsis ... [more]
P2C48_ARATH2.689e-2666.67Probable protein phosphatase 2C 48 OS=Arabidopsis ... [more]
P2C67_ARATH1.022e-2560.22Probable protein phosphatase 2C 67 OS=Arabidopsis ... [more]
P2C42_ARATH5.071e-2559.26Probable protein phosphatase 2C 42 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YE19FM1 TF Citrus clementina cDNA clone KN0AAP3YE19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925240 ID=FC925240; Name=FC925240; organism=Citrus clementina; type=EST; length=500bp
TGTTGATTAAATGTTATAAAAGTAGTTTTATGCCGAGCTCCTTGTCACGG
GCTGCTCAAATTTGCCACTAACAGAGGCTAAATTGGCGCGCATGGTTCTA
TGACATGGCCTAATTTGCATATTGATTGTGAGTTCTAATATTCCAGCTGC
TCTCCTCTGCTTGCAGGTTTCTAGATCTATTGGCGATGTGTATCTGAAAA
AAGCTGAGTATAACAGGGAGCCTTTGTATGCGAAATTTCGCCTTCGTGAA
CCTTTTAGAAAGCCAATTCTGAGTTCTGAACCATCAATTTCAGCGCATGA
ACTTCAACCTTTTGATCAGTTTCTTATATTTGCTTCTGATGGACTGTGGG
AGCATCTTAGCAATCAAGATGCGGTTGATATAGTCCAAAATCACCCACAC
AGTGTAAGATATCTATCAATCTATAACAGCACTGGTTTGCAACATTCGGT
TATAAAATGACAACATTAACTTTATGTGGCTAGTACACTTAGTGGTTTCT
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