FC925288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A_ORYSJ (60S ribosomal protein L7a OS=Oryza sativa subsp. japonica GN=RPL7A PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 2.842e-62 Identity = 116/141 (82.27%), Postives = 126/141 (89.36%), Query Frame = 2 Query: 2 KTVESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQXXXXXXXXXXXXXXXQRLT 424 KTVE+KKPIVVKYGLNHVTYLIEQ+KAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGK+RLGSIVHKKTASVLCLTTVKNEDK+EFSKILEAIKANFNDK++E+RKKWGGG+MGSKSQ QR+T Sbjct: 118 KTVEAKKPIVVKYGLNHVTYLIEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKFDEVRKKWGGGVMGSKSQAKTKAREKLLAKEAAQRMT 258
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A2_ARATH (60S ribosomal protein L7a-2 OS=Arabidopsis thaliana GN=RPL7AB PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 4.104e-61 Identity = 112/122 (91.80%), Postives = 118/122 (96.72%), Query Frame = 2 Query: 2 KTVESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 367 K ESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKSRLG++VH+KTA+ LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 116 KPAESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTAAALCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 237
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A1_ARATH (60S ribosomal protein L7a-1 OS=Arabidopsis thaliana GN=RPL7AA PE=2 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 4.104e-61 Identity = 113/122 (92.62%), Postives = 118/122 (96.72%), Query Frame = 2 Query: 2 KTVESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 367 K ESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKME+PYCIVKGKSRLG++VH+KTAS LCLTTVKNEDK+EFSKILEAIKANFNDKYEE RKKWGGGIMGSKSQ Sbjct: 117 KPSESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEVPYCIVKGKSRLGAVVHQKTASCLCLTTVKNEDKLEFSKILEAIKANFNDKYEEYRKKWGGGIMGSKSQ 238
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A_DROME (60S ribosomal protein L7a OS=Drosophila melanogaster GN=RpL7A PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.118e-41 Identity = 82/122 (67.21%), Postives = 98/122 (80.33%), Query Frame = 2 Query: 2 KTVE-SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 364 K VE KKP V G N VT LIEQ KAQLVVIAHDVDP+ELV++LPALCRKM +PYCIVKGK+RLG +V +KT + L LTTV N DK F K+LEA+K NFN+++EE+R+ WGGGI+GSKS Sbjct: 130 KDVEPKKKPSYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLGRLVRRKTCTTLALTTVDNNDKANFGKVLEAVKTNFNERHEEIRRHWGGGILGSKS 251
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A_ICTPU (60S ribosomal protein L7a OS=Ictalurus punctatus GN=rpl7a PE=2 SV=3) HSP 1 Score: 163.31 bits (412), Expect = 8.897e-40 Identity = 75/119 (63.03%), Postives = 96/119 (80.67%), Query Frame = 2 Query: 8 VESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 364 V +K+P VV+ G+N VT L+E KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG +VH+KT + +C T ED+ +K++EAIK N+ND+YEE+R+ WGG IMG KS Sbjct: 128 VPTKRPPVVRAGVNTVTSLVESKKAQLVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVCFTQTNPEDRAALAKLVEAIKTNYNDRYEEIRRHWGGNIMGPKS 246
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL8_SCHPO (60S ribosomal protein L8 OS=Schizosaccharomyces pombe GN=rpl8 PE=1 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 1.162e-39 Identity = 77/118 (65.25%), Postives = 97/118 (82.20%), Query Frame = 2 Query: 14 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKSQ 367 SKKP VKYGLNHV LIE KA+LV+IA DVDPIELVV+LPALC+KM +PY IVK K+RLG+++H+KTA+VL +T V+ EDK E + I+ A+ ANF+ KY+E R+KWGGGIMG K+Q Sbjct: 126 SKKPYNVKYGLNHVVALIEAKKAKLVLIASDVDPIELVVFLPALCKKMGVPYAIVKNKARLGTVIHQKTAAVLAVTEVREEDKNELASIVSAVDANFSAKYDESRRKWGGGIMGGKTQ 243
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A_BOVIN (60S ribosomal protein L7a OS=Bos taurus GN=RPL7A PE=2 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 7.532e-39 Identity = 71/119 (59.66%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 8 VESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 364 V +K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 128 VPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKSALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A_TAKRU (60S ribosomal protein L7a OS=Takifugu rubripes GN=rpl7a PE=3 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38 Identity = 72/117 (61.54%), Postives = 95/117 (81.20%), Query Frame = 2 Query: 14 SKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 364 +K+P V++ G+N +T L+E KAQLVVIAHDVDPIELV++LPALCRKM +PYCIVKGK+RLG +VH+KT + + T EDK +K++EAIK N+ND+YEE+R+ WGGGI+G KS Sbjct: 130 TKRPPVLRAGVNTITSLVENKKAQLVVIAHDVDPIELVIFLPALCRKMGVPYCIVKGKARLGRLVHRKTCTSVAFTQTNPEDKGALAKLVEAIKTNYNDRYEEIRRHWGGGILGPKS 246
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A_RAT (60S ribosomal protein L7a OS=Rattus norvegicus GN=Rpl7a PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38 Identity = 71/119 (59.66%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 8 VESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 364 V +K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 128 VPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGRLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246
BLAST of FC925288 vs. ExPASy Swiss-Prot
Match: RL7A_MOUSE (60S ribosomal protein L7a OS=Mus musculus GN=Rpl7a PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.285e-38 Identity = 71/119 (59.66%), Postives = 97/119 (81.51%), Query Frame = 2 Query: 8 VESKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKSRLGSIVHKKTASVLCLTTVKNEDKMEFSKILEAIKANFNDKYEELRKKWGGGIMGSKS 364 V +K+P V++ G+N VT L+E KAQLVVIAHDVDPIELVV+LPALCRKM +PYCI+KGK+RLG +VH+KT + + T V +EDK +K++EAI+ N+ND+Y+E+R+ WGG ++G KS Sbjct: 128 VPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGKARLGHLVHRKTCTTVAFTQVNSEDKGALAKLVEAIRTNYNDRYDEIRRHWGGNVLGPKS 246 The following BLAST results are available for this feature:
BLAST of FC925288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925288 ID=FC925288; Name=FC925288; organism=Citrus clementina; type=EST; length=620bpback to top |