FC925295

Overview
NameFC925295
Unique NameFC925295
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14609 contig Ccv1_Contig14609:1006..1730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.423e-45
Identity = 84/139 (60.43%), Postives = 105/139 (75.54%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            +KG NFD PHVI  A ++  IEHV GDMF+SVPKGDAIFMK +LHDW+D HCL++LKNCYKS+PE+GKVIV E +LPE P+T+  +++  H+DV+M+  +PGGKERT  EF  LA GAGF G +      N WVMEF K
Sbjct:  216 LKGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.607e-44
Identity = 80/139 (57.55%), Postives = 104/139 (74.82%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NFD PHVI+ APS+P +EHV GDMF S+PK DA+FMK + HDW+DEHCLK LKNCY+++P++GKVIV E +LP  P++S+ +K   H+DV+M+  +PGGKERT+ EF  LA GAGF G        N ++MEF K
Sbjct:  225 IKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.099e-44
Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NFD PHVI+ AP +P +EHV GDMF SVPKGDAIFMK + HDW+DEHCLK LKNCY ++P++GKVI+ E +LP  P++S+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G +   +  N +V+EF K
Sbjct:  225 IKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.581e-44
Identity = 80/139 (57.55%), Postives = 102/139 (73.38%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NFD PHVI+ APS+P +EHV GDMF SVPKGDAIFMK + HDW+DEHC+K LKNCY ++P++GKVI+ E +LPE P+T + +K+  H+DV+M+  +PGGKERT  EF  LA  AGF   +      N W+ME  K
Sbjct:  223 IKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.581e-44
Identity = 79/139 (56.83%), Postives = 104/139 (74.82%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NFD PHVI+ APS+P ++HV GDMF SVPKGDAIFMK + HDW+D HCLK LKNC++++PE+GKVI+ E +LPE P++++ +++  H+DV+M+  +PGGKERT  EF  LA GAGF G        N W+ME  K
Sbjct:  225 IKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.977e-44
Identity = 83/139 (59.71%), Postives = 99/139 (71.22%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NFD PHVI+ AP +P +EHV GDMF SVPKGDAIFMK + HDW+DEHCLK LKNCY ++PE GKVIV E +LP  P+ S+ +K   H+D +M+  +PGGKERT  EF  LA GAGF G        N +VMEF K
Sbjct:  230 IKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.042e-43
Identity = 79/123 (64.23%), Postives = 97/123 (78.86%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGI 373
            +KG NFD PHVI+ APSHP IEHV GDMF SVPKGDAIFMK + HDW+DEHC+K LKNCY+S+PEDGKVI+ E +LPE P++S+ +K   H+D +M+  +PGGKERT  EF  LA  +GF GI
Sbjct:  223 LKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGI 345          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.042e-43
Identity = 81/139 (58.27%), Postives = 103/139 (74.10%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NFD PHVI+ AP +P ++HV GDMF SVPKGDAIFMK + HDW+DEHCLK LKNCY ++P++GKVI+ E +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA G+GF GI       N +V+EF K
Sbjct:  225 IKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.777e-43
Identity = 79/139 (56.83%), Postives = 104/139 (74.82%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NF+ PHV++ APSH  +EHV GDMF SVPKGDAIFMK + HDW+D+HC KLLKNCY+++P++GKVI+ E +LPE P+TS+ +++  H+DV+M+  +PGGKERT  EF  LA GAGF       +  N W+ME  K
Sbjct:  212 IKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of FC925295 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.321e-43
Identity = 82/139 (58.99%), Postives = 101/139 (72.66%), Query Frame = 2
Query:    5 IKGFNFDQPHVIDHAPSHPRIEHVRGDMFQSVPKGDAIFMKSVLHDWNDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 421
            IKG NFD PHVI+ APS+P +EHV GDMF SVPK DA+FMK + HDW+D HCLK LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  225 IKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
The following BLAST results are available for this feature:
BLAST of FC925295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
COMT1_ZINEL9.423e-4560.43Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_MEDSA1.607e-4457.55Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_PRUDU2.099e-4458.27Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_OCIBA3.581e-4457.55Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CATRO3.581e-4456.83Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CLABR7.977e-4459.71Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
OMT1_ARATH1.042e-4364.23Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_ROSCH1.042e-4358.27Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_COFCA1.777e-4356.83Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_POPTM2.321e-4358.99Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YF20FM1 TF Citrus clementina cDNA clone KN0AAP3YF20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925295 ID=FC925295; Name=FC925295; organism=Citrus clementina; type=EST; length=725bp
CTATATTAAGGGCTTCAATTTCGACCAGCCTCATGTTATTGACCATGCCC
CATCACATCCACGTATTGAGCATGTACGGGGTGATATGTTCCAAAGTGTT
CCAAAAGGTGATGCCATTTTTATGAAGTCGGTACTGCACGATTGGAATGA
TGAACATTGCTTGAAGTTGTTGAAGAATTGCTACAAAAGCATCCCAGAAG
ATGGAAAGGTAATCGTTGTGGAGTCAATGCTTCCAGAAGTTCCTAATACA
AGCATTGAATCAAAATCAAATTCCCATTTGGACGTGCTTATGATGATTCA
AAGTCCCGGTGGAAAGGAGAGAACAAGGCATGAATTCATGACCCTGGCTA
CTGGCGCTGGTTTTGGTGGGATCAGTTGTGAACTTGCTATTGGTAATCTC
TGGGTTATGGAGTTCTATAAGTAGAGTGCATGCCCATGCATCCTAGAAAT
AAAGCAAATCTTGTGTTGATTGTCTTGCGTGTATCTCTTTCCAAGCATGC
TGATATGTCTCCCAAAGACGAGCAAGAACCCATGCATTTGACAAACTTCC
CAGGTACCTGATAGCCATGCTTGAGAGGAGGAGTCTAGGACTTAATAATA
AGTGCTTTGAAATAAATGGGTGCTTGACACGTGGTCTATCAACTATTTGT
GCAATATTGTTACCCATATTTCCTATTATTTCTAGTATTTCATGTGTTAC
TGTCTAAGGTGTCTTTTGTTGTTCC
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