FC925298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925298 vs. ExPASy Swiss-Prot
Match: DDPS6_ARATH (Dehydrodolichyl diphosphate synthase 6 OS=Arabidopsis thaliana GN=At2g17570 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 9.698e-27 Identity = 56/73 (76.71%), Postives = 65/73 (89.04%), Query Frame = 2 Query: 206 INLVDVEKHMYMAVAPDPDILMRSSGETRLSNFLLWQTSNCLLDSPAALWPEIGLWHLVWAVLKFQRNHSFLE 424 I LVD+E++M M+VAP+PDIL+RSSGETRLSNFLLWQT N L SPAALWPEIGL HL+WA+L FQRNHS+LE Sbjct: 217 IQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAILNFQRNHSYLE 289
BLAST of FC925298 vs. ExPASy Swiss-Prot
Match: DDPS8_ARATH (Dehydrodolichyl diphosphate synthase 8 OS=Arabidopsis thaliana GN=At5g60510 PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.558e-19 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 206 INLVDVEKHMYMAVAPDPDILMRSSGETRLSNFLLWQTSNCLLDSPAALWPEIGLWHLVWAVLKFQRNHSFLE 424 + L D+E+ MY +V P PD+++R+ G RLSNF+ WQTS LL ALWPE+GLWHLVWA+LKFQR +L+ Sbjct: 194 LELSDIEECMYTSVVPVPDLVVRTGGGDRLSNFMTWQTSRALLHRTEALWPELGLWHLVWAILKFQRMQDYLQ 266
BLAST of FC925298 vs. ExPASy Swiss-Prot
Match: DDPS7_ARATH (Dehydrodolichyl diphosphate synthase 7 OS=Arabidopsis thaliana GN=At5g60500 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.341e-19 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 203 IINLVDVEKHMYMAVAPDPDILMRSSGETRLSNFLLWQTSNCLLDSPAALWPEIGLWHLVWAVLKFQRNHSFL 421 ++ L DVE+ MY ++ P PD+++R+ G RLSNF+ WQTS LL ALWPE+GLWHLVWA+LKFQR +L Sbjct: 192 LLELSDVEECMYTSIVPVPDLVIRTGGGDRLSNFMTWQTSRSLLHRTEALWPELGLWHLVWAILKFQRMQDYL 264
BLAST of FC925298 vs. ExPASy Swiss-Prot
Match: DHDDS_MOUSE (Dehydrodolichyl diphosphate synthase OS=Mus musculus GN=Dhdds PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.415e-14 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 221 VEKHMYMAVAPDPDILMRSSGETRLSNFLLWQTSNCLLDSPAALWPEIGLWHLVWAVLKFQRNHSFLE 424 ++K +Y +P PDIL+R+SGE RLS+FLLWQTS+ L LWPE W+L A+L+FQRNH L+ Sbjct: 188 LDKCLYSNHSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQRNHGALQ 255
BLAST of FC925298 vs. ExPASy Swiss-Prot
Match: DHDDS_HUMAN (Dehydrodolichyl diphosphate synthase OS=Homo sapiens GN=DHDDS PE=2 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.230e-13 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 2 Query: 221 VEKHMYMAVAPDPDILMRSSGETRLSNFLLWQTSNCLLDSPAALWPEIGLWHLVWAVLKFQRNHSFLE 424 ++K +Y +P PDIL+R+SGE RLS+FLLWQTS+ L LWPE W+L A+L+FQ NHS L+ Sbjct: 188 LDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQ 255 The following BLAST results are available for this feature:
BLAST of FC925298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925298 ID=FC925298; Name=FC925298; organism=Citrus clementina; type=EST; length=762bpback to top |