FC925302
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP_ARATH (Putative selenium-binding protein OS=Arabidopsis thaliana GN=At4g14030 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 2.029e-21 Identity = 44/57 (77.19%), Postives = 51/57 (89.47%), Query Frame = 2 Query: 2 ELPLKGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 E+ KGSH++QIDV +EKGG+ INP+FFVDF EPDGP+LAHEMRYPGGDCTSDIWI Sbjct: 434 EIMEKGSHIIQIDVDTEKGGLTINPDFFVDFGDEPDGPSLAHEMRYPGGDCTSDIWI 490
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1B_XENLA (Selenium-binding protein 1-B OS=Xenopus laevis GN=selenbp1-B PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.608e-18 Identity = 39/53 (73.58%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 14 KGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +G+ MLQIDV +EKGG+ +NPNF VDF EPDGP LAHE+RYPGGDC+SDIWI Sbjct: 420 EGAVMLQIDVDTEKGGLKLNPNFLVDFGKEPDGPVLAHELRYPGGDCSSDIWI 472
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1A_XENLA (Selenium-binding protein 1-A OS=Xenopus laevis GN=selenbp1-A PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.608e-18 Identity = 40/57 (70.18%), Postives = 48/57 (84.21%), Query Frame = 2 Query: 2 ELPLKGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +L +G+ MLQIDV ++KGG+ +NPNF VDF EPDGP LAHE+RYPGGDCTSDIWI Sbjct: 416 DLLKEGAVMLQIDVDTKKGGLKLNPNFLVDFGKEPDGPVLAHEIRYPGGDCTSDIWI 472
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1_XENTR (Selenium-binding protein 1 OS=Xenopus tropicalis GN=selenbp1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 6.109e-18 Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 2 Query: 14 KGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +GS MLQIDV +EKGG+ +NPNF VDF EP GP LAHE+RYPGGDC+SDIW+ Sbjct: 420 EGSVMLQIDVDTEKGGLKLNPNFLVDFGKEPGGPVLAHELRYPGGDCSSDIWV 472
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1_DANRE (Selenium-binding protein 1 OS=Danio rerio GN=selenbp1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.979e-18 Identity = 38/57 (66.67%), Postives = 49/57 (85.96%), Query Frame = 2 Query: 2 ELPLKGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +L +GS M+QIDV+++ GG+ +N NF VDF AEP+GPALAHE+RYPGGDCTSDIW+ Sbjct: 401 DLIKEGSVMMQIDVNTDTGGLKLNENFLVDFGAEPEGPALAHELRYPGGDCTSDIWL 457
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.322e-17 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 2 Query: 2 ELPLKGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +L +GS MLQ+DV + KGG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 416 DLIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1_HUMAN (Selenium-binding protein 1 OS=Homo sapiens GN=SELENBP1 PE=1 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 2.322e-17 Identity = 39/57 (68.42%), Postives = 47/57 (82.46%), Query Frame = 2 Query: 2 ELPLKGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +L +GS MLQ+DV + KGG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 416 DLIREGSVMLQVDVDTVKGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1_MOUSE (Selenium-binding protein 1 OS=Mus musculus GN=Selenbp1 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 5.172e-17 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 2 Query: 2 ELPLKGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +L +GS MLQIDV + GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 416 DLIREGSMMLQIDVDTVNGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1_RAT (Selenium-binding protein 1 OS=Rattus norvegicus GN=Selenbp1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.755e-17 Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 2 Query: 14 KGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +GS MLQIDV + GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIWI Sbjct: 420 EGSVMLQIDVDTANGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWI 472
BLAST of FC925302 vs. ExPASy Swiss-Prot
Match: SBP1_BOVIN (Selenium-binding protein 1 OS=Bos taurus GN=SELENBP1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.755e-17 Identity = 38/57 (66.67%), Postives = 47/57 (82.46%), Query Frame = 2 Query: 2 ELPLKGSHMLQIDVHSEKGGMAINPNFFVDFEAEPDGPALAHEMRYPGGDCTSDIWI 172 +L +GS MLQIDV + +GG+ +NPNF VDF EP GPALAHE+RYPGGDC+SDIW+ Sbjct: 416 DLIREGSVMLQIDVDTVRGGLKLNPNFLVDFGKEPLGPALAHELRYPGGDCSSDIWL 472 The following BLAST results are available for this feature:
BLAST of FC925302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925302 ID=FC925302; Name=FC925302; organism=Citrus clementina; type=EST; length=458bpback to top |