FC925354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.462e-38 Identity = 77/90 (85.56%), Postives = 83/90 (92.22%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 271 K L VDFTASWCGPCRFIAPFLAELA LPNV FLKVDVDELK+VA +WAVE+MPTFMFLKEGKI+DKVVGAKK+ELQQTIAKH+ATAS Sbjct: 28 KGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAS 117
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.643e-37 Identity = 73/87 (83.91%), Postives = 79/87 (90.80%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 262 K L VDFTASWCGPCRFIAPF A+LA LPNVLFLKVD DELKSVA+DWA++AMPTFMFLKEGKI+DKVVGAKK+ELQ TIAKHLA Sbjct: 28 KTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 6.064e-37 Identity = 74/90 (82.22%), Postives = 81/90 (90.00%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 271 K+L VDFTASWCGPC+FIA F AELA +P V FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKK+ELQQTIAKH+++ S Sbjct: 27 KKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTS 116
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.398e-33 Identity = 65/90 (72.22%), Postives = 80/90 (88.89%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 271 K+L VDFTASWCGPCRFIAP LA++A +P+V+FLKVDVDELK+V+ +W+VEAMPTF+F+K+GK VD+VVGAKKEELQQTI KH A A+ Sbjct: 34 KKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPAT 123
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.356e-27 Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 274 +DFTASWCGPCRFIAP AE A P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVGA+K++LQ TI KH+ +A Sbjct: 33 IDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAA 118
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.356e-27 Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 274 +DFTASWCGPCRFIAP AE A P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVGA+K++LQ TI KH+ +A Sbjct: 33 IDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAA 118
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.267e-26 Identity = 54/90 (60.00%), Postives = 69/90 (76.67%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATAS 271 K+L VDFTA+WCGPCR I P EL+ P + FLKVDVDEL+ VA +W VEAMPTF+F+K+GK VDKVVGAKK++L++ +A A A+ Sbjct: 26 KRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAALAAAAT 115
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.073e-25 Identity = 51/85 (60.00%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKH 256 K+L +DFTASWC PCRFIAP AE+A NV+F K+DVDEL++VA ++ VEAMPTF+F+KEG I+D+VVGA K+E+ + + KH Sbjct: 27 KKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 6.954e-25 Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 262 K+L +DFTASWCGPCR +AP A+LA P +FLKVDVDELK +A ++VEAMPTF+F+KEG + D+VVGA KEEL + H A Sbjct: 40 KKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLHAA 126
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 9.083e-25 Identity = 53/91 (58.24%), Postives = 70/91 (76.92%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELAN-ILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLATASA 274 +L +DFTASWC PCR IAP A+LA + + +F KVDVDEL++VA ++ VEAMPTF+ +K+G +VDKVVGA+KE+L TIAKH A+A Sbjct: 29 KLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDLHATIAKHTGVATA 119 The following BLAST results are available for this feature:
BLAST of FC925354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925354 ID=FC925354; Name=FC925354; organism=Citrus clementina; type=EST; length=308bpback to top |